RNA–Protein interactions for RNA: ENST00000478736.1

PDE1C-208, Transcript of phosphodiesterase 1C, humanhuman

TSL 3

Gene PDE1C, Length 495 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-208ENST00000478736 PHACTR2O75167 634 aa3.31□□□□□ -1.88
PDE1C-208ENST00000478736 ALX3O95076 343 aa3.31□□□□□ -1.88
PDE1C-208ENST00000478736 GHRHP01286 108 aa3.31□□□□□ -1.88
PDE1C-208ENST00000478736 HOXD8P13378 290 aaPredicted RBP3.31□□□□□ -1.88
PDE1C-208ENST00000478736 SOX18P35713 384 aa3.31□□□□□ -1.88
PDE1C-208ENST00000478736 HYAL2Q12891 473 aa3.31□□□□□ -1.88
PDE1C-208ENST00000478736 MSL1Q68DK7 614 aa3.31□□□□□ -1.88
PDE1C-208ENST00000478736 ALKBH2Q6NS38 261 aa3.31□□□□□ -1.88
PDE1C-208ENST00000478736 KANK3Q6NY19 840 aa3.31□□□□□ -1.88
PDE1C-208ENST00000478736 PODNQ7Z5L7 613 aa3.31□□□□□ -1.88
PDE1C-208ENST00000478736 EPS8L3Q8TE67 593 aaKnown RBP3.31□□□□□ -1.88
PDE1C-208ENST00000478736 FAM129BQ96TA1 746 aa3.31□□□□□ -1.88
PDE1C-208ENST00000478736 OSMRQ99650 979 aa3.31□□□□□ -1.88
PDE1C-208ENST00000478736 ZKSCAN3Q9BRR0 538 aa3.31□□□□□ -1.88
PDE1C-208ENST00000478736 CARD10Q9BWT7 1032 aa3.31□□□□□ -1.88
PDE1C-208ENST00000478736 PBX4Q9BYU1 374 aa3.31□□□□□ -1.88
PDE1C-208ENST00000478736 EFCC1Q9HA90 598 aa3.31□□□□□ -1.88
PDE1C-208ENST00000478736 PRDM6Q9NQX0 595 aa3.31□□□□□ -1.88
PDE1C-208ENST00000478736 KCNK4Q9NYG8 393 aa3.31□□□□□ -1.88
PDE1C-208ENST00000478736 WWC3Q9ULE0 1092 aa3.31□□□□□ -1.88
PDE1C-208ENST00000478736 FNDC3AQ9Y2H6 1198 aaKnown RBP3.31□□□□□ -1.88
PDE1C-208ENST00000478736 PHF20L1A8MW92 1017 aa3.3□□□□□ -1.88
PDE1C-208ENST00000478736 K7ELQ4 463 aaPredicted RBP3.3□□□□□ -1.88
PDE1C-208ENST00000478736 EIF1AYO14602 144 aaKnown RBP3.3□□□□□ -1.88
PDE1C-208ENST00000478736 WISP1O95388 367 aa3.3□□□□□ -1.88
PDE1C-208ENST00000478736 PROCP04070 461 aa3.3□□□□□ -1.88
PDE1C-208ENST00000478736 EPHA1P21709 976 aa3.3□□□□□ -1.88
PDE1C-208ENST00000478736 TAGLNQ01995 201 aaKnown RBP3.3□□□□□ -1.88
PDE1C-208ENST00000478736 DSC3Q14574 896 aa3.3□□□□□ -1.88
PDE1C-208ENST00000478736 SPRED3Q2MJR0 410 aa3.3□□□□□ -1.88
PDE1C-208ENST00000478736 TMC1Q8TDI8 760 aa3.3□□□□□ -1.88
PDE1C-208ENST00000478736 FAM13BQ9NYF5 915 aa3.3□□□□□ -1.88
PDE1C-208ENST00000478736 FRRS1LQ9P0K9 344 aa3.3□□□□□ -1.88
PDE1C-208ENST00000478736 MTMR7Q9Y216 660 aa3.3□□□□□ -1.88
PDE1C-208ENST00000478736 A0A1W2PP55 124 aa3.29□□□□□ -1.88
PDE1C-208ENST00000478736 MAPK1P28482 360 aa3.29□□□□□ -1.88
PDE1C-208ENST00000478736 GRIA4P48058 902 aa3.29□□□□□ -1.88
PDE1C-208ENST00000478736 TRIM28Q13263 835 aaKnown RBP3.29□□□□□ -1.88
PDE1C-208ENST00000478736 SETDB1Q15047 1291 aa3.29□□□□□ -1.88
PDE1C-208ENST00000478736 VN1R5Q7Z5H4 357 aa3.29□□□□□ -1.88
PDE1C-208ENST00000478736 AGGF1Q8N302 714 aaeCLIP3.29□□□□□ -1.88
PDE1C-208ENST00000478736 TTC9Q92623 222 aa3.29□□□□□ -1.88
PDE1C-208ENST00000478736 NXPE3Q969Y0 559 aa3.29□□□□□ -1.88
PDE1C-208ENST00000478736 KLHDC7BQ96G42 594 aa3.29□□□□□ -1.88
PDE1C-208ENST00000478736 TCF12Q99081 682 aa3.29□□□□□ -1.88
PDE1C-208ENST00000478736 SPOCK3Q9BQ16 436 aa3.29□□□□□ -1.88
PDE1C-208ENST00000478736 RBCK1Q9BYM8 510 aa3.29□□□□□ -1.88
PDE1C-208ENST00000478736 MUC3BQ9H195 1237 aa3.29□□□□□ -1.88
PDE1C-208ENST00000478736 NPHS2Q9NP85 383 aa3.29□□□□□ -1.88
PDE1C-208ENST00000478736 ZBTB7CA1YPR0 619 aa3.28□□□□□ -1.88
PDE1C-208ENST00000478736 PDE2AO00408 941 aaPredicted RBP3.28□□□□□ -1.88
PDE1C-208ENST00000478736 SOX1O00570 391 aaPredicted RBP3.28□□□□□ -1.88
PDE1C-208ENST00000478736 NDUFB5O43674 189 aa3.28□□□□□ -1.88
PDE1C-208ENST00000478736 ADAM11O75078 769 aa3.28□□□□□ -1.88
PDE1C-208ENST00000478736 ECEL1O95672 775 aa3.28□□□□□ -1.88
PDE1C-208ENST00000478736 DLGAP3O95886 979 aa3.28□□□□□ -1.88
PDE1C-208ENST00000478736 PCSK2P16519 638 aa3.28□□□□□ -1.88
PDE1C-208ENST00000478736 ITGB7P26010 798 aa3.28□□□□□ -1.88
PDE1C-208ENST00000478736 DOC2BQ14184 412 aa3.28□□□□□ -1.88
PDE1C-208ENST00000478736 FOXD4L6Q3SYB3 417 aaPredicted RBP3.28□□□□□ -1.88
PDE1C-208ENST00000478736 FOXD4L3Q6VB84 417 aaPredicted RBP3.28□□□□□ -1.88
PDE1C-208ENST00000478736 WFDC8Q8IUA0 241 aa3.28□□□□□ -1.88
PDE1C-208ENST00000478736 GALNT12Q8IXK2 581 aa3.28□□□□□ -1.88
PDE1C-208ENST00000478736 FMR1NBQ8N0W7 255 aaPredicted RBP3.28□□□□□ -1.88
PDE1C-208ENST00000478736 SNX29Q8TEQ0 813 aa3.28□□□□□ -1.88
PDE1C-208ENST00000478736 CCDC74AQ96AQ1 378 aa3.28□□□□□ -1.88
PDE1C-208ENST00000478736 SPACA7Q96KW9 195 aa3.28□□□□□ -1.88
PDE1C-208ENST00000478736 GZF1Q9H116 711 aaPredicted RBP3.28□□□□□ -1.88
PDE1C-208ENST00000478736 GOLGA2P5Q9HBQ8 144 aa3.28□□□□□ -1.88
PDE1C-208ENST00000478736 DCTN4Q9UJW0 460 aa3.28□□□□□ -1.88
PDE1C-208ENST00000478736 AMOTL2Q9Y2J4 779 aa3.28□□□□□ -1.88
PDE1C-208ENST00000478736 RBAK-RBAKDNI3L0D1 243 aa3.27□□□□□ -1.89
PDE1C-208ENST00000478736 DLL1O00548 723 aa3.27□□□□□ -1.89
PDE1C-208ENST00000478736 TREHO43280 583 aa3.27□□□□□ -1.89
PDE1C-208ENST00000478736 CTSBP07858 339 aa3.27□□□□□ -1.89
PDE1C-208ENST00000478736 FURINP09958 794 aa3.27□□□□□ -1.89
PDE1C-208ENST00000478736 SPATA31C1P0DKV0 1188 aa3.27□□□□□ -1.89
PDE1C-208ENST00000478736 CDC27P30260 824 aa3.27□□□□□ -1.89
PDE1C-208ENST00000478736 ZNF157P51786 506 aaPredicted RBP3.27□□□□□ -1.89
PDE1C-208ENST00000478736 NRG1Q02297 640 aaPredicted RBP3.27□□□□□ -1.89
PDE1C-208ENST00000478736 EHHADHQ08426 723 aa3.27□□□□□ -1.89
PDE1C-208ENST00000478736 PCSK7Q16549 785 aa3.27□□□□□ -1.89
PDE1C-208ENST00000478736 ZNF423Q2M1K9 1284 aa3.27□□□□□ -1.89
PDE1C-208ENST00000478736 SND1Q7KZF4 910 aaKnown RBP eCLIP3.27□□□□□ -1.89
PDE1C-208ENST00000478736 FBXO11Q86XK2 927 aa3.27□□□□□ -1.89
PDE1C-208ENST00000478736 GLIS3Q8NEA6 775 aa3.27□□□□□ -1.89
PDE1C-208ENST00000478736 TTC16Q8NEE8 873 aa3.27□□□□□ -1.89
PDE1C-208ENST00000478736 ASAP3Q8TDY4 903 aa3.27□□□□□ -1.89
PDE1C-208ENST00000478736 FOXD4L4Q8WXT5 416 aaPredicted RBP3.27□□□□□ -1.89
PDE1C-208ENST00000478736 SLC7A3Q8WY07 619 aa3.27□□□□□ -1.89
PDE1C-208ENST00000478736 PODXL2Q9NZ53 605 aa3.27□□□□□ -1.89
PDE1C-208ENST00000478736 SOX13Q9UN79 622 aa3.27□□□□□ -1.89
PDE1C-208ENST00000478736 PPME1Q9Y570 386 aa3.27□□□□□ -1.89
PDE1C-208ENST00000478736 PNMA6FA0A0J9YX94 578 aa3.26□□□□□ -1.89
PDE1C-208ENST00000478736 FSCN2O14926 492 aa3.26□□□□□ -1.89
PDE1C-208ENST00000478736 CPNE3O75131 537 aaKnown RBP3.26□□□□□ -1.89
PDE1C-208ENST00000478736 SMNDC1O75940 238 aaKnown RBP eCLIP3.26□□□□□ -1.89
PDE1C-208ENST00000478736 RPLP1P05386 114 aaKnown RBP3.26□□□□□ -1.89
PDE1C-208ENST00000478736 NOS3P29474 1203 aa3.26□□□□□ -1.89
PDE1C-208ENST00000478736 USP5P45974 858 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms