RNA–Protein interactions for RNA: ENST00000476408.1

CD53-204, Transcript of CD53 molecule, humanhuman

TSL 5

Gene CD53, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-204ENST00000476408 IFIT2P09913 472 aaKnown RBP7.99□□□□□ -1.13
CD53-204ENST00000476408 ATXN8OSP0DMR3 200 aa7.99□□□□□ -1.13
CD53-204ENST00000476408 ETF1P62495 437 aaKnown RBP7.99□□□□□ -1.13
CD53-204ENST00000476408 LRMPQ12912 555 aa7.99□□□□□ -1.13
CD53-204ENST00000476408 TOB2Q14106 344 aaPredicted RBP7.99□□□□□ -1.13
CD53-204ENST00000476408 HSP90AB2PQ58FF8 381 aa7.99□□□□□ -1.13
CD53-204ENST00000476408 CT47A1Q5JQC4 288 aaPredicted RBP7.99□□□□□ -1.13
CD53-204ENST00000476408 HDGFL1Q5TGJ6 251 aa7.99□□□□□ -1.13
CD53-204ENST00000476408 ADALQ6DHV7 355 aa7.99□□□□□ -1.13
CD53-204ENST00000476408 BICD2Q8TD16 824 aa7.99□□□□□ -1.13
CD53-204ENST00000476408 PGBD1Q96JS3 809 aa7.99□□□□□ -1.13
CD53-204ENST00000476408 EYA1Q99502 592 aa7.99□□□□□ -1.13
CD53-204ENST00000476408 EFCC1Q9HA90 598 aa7.99□□□□□ -1.13
CD53-204ENST00000476408 CWC15Q9P013 229 aaKnown RBP7.99□□□□□ -1.13
CD53-204ENST00000476408 DBF4Q9UBU7 674 aaPredicted RBP7.99□□□□□ -1.13
CD53-204ENST00000476408 ERBB3P21860 1342 aa7.99□□□□□ -1.13
CD53-204ENST00000476408 WDR19Q8NEZ3 1342 aa7.99□□□□□ -1.13
CD53-204ENST00000476408 SH3TC1Q8TE82 1336 aa7.99□□□□□ -1.13
CD53-204ENST00000476408 SALL1Q9NSC2 1324 aa7.99□□□□□ -1.13
CD53-204ENST00000476408 CEP350Q5VT06 3117 aa7.98□□□□□ -1.13
CD53-204ENST00000476408 POTEB2H3BUK9 544 aa7.98□□□□□ -1.13
CD53-204ENST00000476408 ZSCAN12O43309 604 aa7.98□□□□□ -1.13
CD53-204ENST00000476408 KINO60870 393 aaKnown RBP7.98□□□□□ -1.13
CD53-204ENST00000476408 NR1I2O75469 434 aa7.98□□□□□ -1.13
CD53-204ENST00000476408 RPS6KA5O75582 802 aa7.98□□□□□ -1.13
CD53-204ENST00000476408 CDK11BP21127 795 aaKnown RBP7.98□□□□□ -1.13
CD53-204ENST00000476408 GTF2E1P29083 439 aaPredicted RBP7.98□□□□□ -1.13
CD53-204ENST00000476408 ADD1P35611 737 aaKnown RBP7.98□□□□□ -1.13
CD53-204ENST00000476408 EIF4A1P60842 406 aaKnown RBP7.98□□□□□ -1.13
CD53-204ENST00000476408 PTH1RQ03431 593 aa7.98□□□□□ -1.13
CD53-204ENST00000476408 EN1Q05925 392 aaPredicted RBP7.98□□□□□ -1.13
CD53-204ENST00000476408 SNW1Q13573 536 aaKnown RBP7.98□□□□□ -1.13
CD53-204ENST00000476408 LRRFIP1Q32MZ4 808 aaKnown RBP7.98□□□□□ -1.13
CD53-204ENST00000476408 ADCK5Q3MIX3 580 aa7.98□□□□□ -1.13
CD53-204ENST00000476408 CCDC144BQ3MJ40 725 aa7.98□□□□□ -1.13
CD53-204ENST00000476408 NUTM2GQ5VZR2 741 aa7.98□□□□□ -1.13
CD53-204ENST00000476408 NUTM1Q86Y26 1132 aa7.98□□□□□ -1.13
CD53-204ENST00000476408 CCAR1Q8IX12 1150 aaKnown RBP7.98□□□□□ -1.13
CD53-204ENST00000476408 DHX40Q8IX18 779 aaKnown RBP7.98□□□□□ -1.13
CD53-204ENST00000476408 CCDC144CPQ8IYA2 1237 aa7.98□□□□□ -1.13
CD53-204ENST00000476408 GPR161Q8N6U8 529 aaKnown RBP7.98□□□□□ -1.13
CD53-204ENST00000476408 KCNG4Q8TDN1 519 aa7.98□□□□□ -1.13
CD53-204ENST00000476408 IPO4Q8TEX9 1081 aaKnown RBP7.98□□□□□ -1.13
CD53-204ENST00000476408 HNRNPLLQ8WVV9 542 aaKnown RBP7.98□□□□□ -1.13
CD53-204ENST00000476408 ZNF274Q96GC6 653 aaPredicted RBP7.98□□□□□ -1.13
CD53-204ENST00000476408 DNAJC25Q9H1X3 360 aa7.98□□□□□ -1.13
CD53-204ENST00000476408 TMX1Q9H3N1 280 aa7.98□□□□□ -1.13
CD53-204ENST00000476408 IL1RAPL2Q9NP60 686 aa7.98□□□□□ -1.13
CD53-204ENST00000476408 RTEL1Q9NZ71 1219 aa7.98□□□□□ -1.13
CD53-204ENST00000476408 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.98□□□□□ -1.13
CD53-204ENST00000476408 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.98□□□□□ -1.13
CD53-204ENST00000476408 FHOD1Q9Y613 1164 aa7.98□□□□□ -1.13
CD53-204ENST00000476408 PALLDQ8WX93 1383 aa7.97□□□□□ -1.13
CD53-204ENST00000476408 PNMA6AP0CW24 399 aaPredicted RBP7.97□□□□□ -1.13
CD53-204ENST00000476408 ATP5JP18859 108 aa7.97□□□□□ -1.13
CD53-204ENST00000476408 FBLN1P23142 703 aa7.97□□□□□ -1.13
CD53-204ENST00000476408 SFPQP23246 707 aaKnown RBP eCLIP7.97□□□□□ -1.13
CD53-204ENST00000476408 R3HDM1Q15032 1099 aaKnown RBP7.97□□□□□ -1.13
CD53-204ENST00000476408 TSHZ3Q63HK5 1081 aa7.97□□□□□ -1.13
CD53-204ENST00000476408 LARP1Q6PKG0 1096 aaKnown RBP7.97□□□□□ -1.13
CD53-204ENST00000476408 TMCO3Q6UWJ1 677 aa7.97□□□□□ -1.13
CD53-204ENST00000476408 NOL8Q76FK4 1167 aaKnown RBP7.97□□□□□ -1.13
CD53-204ENST00000476408 BRAPQ7Z569 592 aa7.97□□□□□ -1.13
CD53-204ENST00000476408 LINS1Q8NG48 757 aa7.97□□□□□ -1.13
CD53-204ENST00000476408 CABLES1Q8TDN4 633 aa7.97□□□□□ -1.13
CD53-204ENST00000476408 MRPS27Q92552 414 aaKnown RBP7.97□□□□□ -1.13
CD53-204ENST00000476408 EXOC4Q96A65 974 aa7.97□□□□□ -1.13
CD53-204ENST00000476408 UTP14AQ9BVJ6 771 aaKnown RBP7.97□□□□□ -1.13
CD53-204ENST00000476408 YY1AP1Q9H869 796 aa7.97□□□□□ -1.13
CD53-204ENST00000476408 POLR3EQ9NVU0 708 aa7.97□□□□□ -1.13
CD53-204ENST00000476408 IQSEC3Q9UPP2 1182 aaPredicted RBP7.97□□□□□ -1.13
CD53-204ENST00000476408 SIPA1L3O60292 1781 aaPredicted RBP7.97□□□□□ -1.13
CD53-204ENST00000476408 ARHGAP6O43182 974 aa7.96□□□□□ -1.14
CD53-204ENST00000476408 TAF5LO75529 589 aa7.96□□□□□ -1.14
CD53-204ENST00000476408 DDX58O95786 925 aaKnown RBP7.96□□□□□ -1.14
CD53-204ENST00000476408 FAM98CQ17RN3 349 aaKnown RBP7.96□□□□□ -1.14
CD53-204ENST00000476408 AMOTQ4VCS5 1084 aa7.96□□□□□ -1.14
CD53-204ENST00000476408 E4F1Q66K89 784 aaPredicted RBP7.96□□□□□ -1.14
CD53-204ENST00000476408 LMOD2Q6P5Q4 547 aa7.96□□□□□ -1.14
CD53-204ENST00000476408 KSR2Q6VAB6 950 aa7.96□□□□□ -1.14
CD53-204ENST00000476408 CKAP2LQ8IYA6 745 aa7.96□□□□□ -1.14
CD53-204ENST00000476408 FMR1NBQ8N0W7 255 aaPredicted RBP7.96□□□□□ -1.14
CD53-204ENST00000476408 IL17REQ8NFR9 667 aa7.96□□□□□ -1.14
CD53-204ENST00000476408 ANKRD24Q8TF21 1146 aa7.96□□□□□ -1.14
CD53-204ENST00000476408 BBXQ8WY36 941 aaPredicted RBP7.96□□□□□ -1.14
CD53-204ENST00000476408 UBXN4Q92575 508 aa7.96□□□□□ -1.14
CD53-204ENST00000476408 RABGGTAQ92696 567 aa7.96□□□□□ -1.14
CD53-204ENST00000476408 PPP1R13BQ96KQ4 1090 aa7.96□□□□□ -1.14
CD53-204ENST00000476408 NEK1Q96PY6 1258 aa7.96□□□□□ -1.14
CD53-204ENST00000476408 DSCC1Q9BVC3 393 aa7.96□□□□□ -1.14
CD53-204ENST00000476408 GPR108Q9NPR9 543 aa7.96□□□□□ -1.14
CD53-204ENST00000476408 COPRSQ9NQ92 184 aa7.96□□□□□ -1.14
CD53-204ENST00000476408 ORC3Q9UBD5 711 aaPredicted RBP7.96□□□□□ -1.14
CD53-204ENST00000476408 NRBP1Q9UHY1 535 aa7.96□□□□□ -1.14
CD53-204ENST00000476408 PHF8Q9UPP1 1060 aa7.96□□□□□ -1.14
CD53-204ENST00000476408 SPG7Q9UQ90 795 aa7.96□□□□□ -1.14
CD53-204ENST00000476408 CARMIL3Q8ND23 1372 aa7.96□□□□□ -1.14
CD53-204ENST00000476408 ABCC12Q96J65 1359 aa7.96□□□□□ -1.14
CD53-204ENST00000476408 DDX60Q8IY21 1712 aaKnown RBP7.95□□□□□ -1.14
CD53-204ENST00000476408 ABCA3Q99758 1704 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms