RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 ITGB4P16144 1822 aa13.63□□□□□ -0.23
KCNIP3-206ENST00000475491 GOLGA6L22H0YM25 854 aa13.63□□□□□ -0.23
KCNIP3-206ENST00000475491 SMIM22K7EJ46 135 aa13.63□□□□□ -0.23
KCNIP3-206ENST00000475491 DDX11Q96FC9 970 aa13.63□□□□□ -0.23
KCNIP3-206ENST00000475491 CCDC171Q6TFL3 1326 aa13.63□□□□□ -0.23
KCNIP3-206ENST00000475491 RRP12Q5JTH9 1297 aaKnown RBP13.63□□□□□ -0.23
KCNIP3-206ENST00000475491 FERMT3Q86UX7 667 aa13.63□□□□□ -0.23
KCNIP3-206ENST00000475491 PDGFDQ9GZP0 370 aaPredicted RBP13.63□□□□□ -0.23
KCNIP3-206ENST00000475491 ZHX1Q9UKY1 873 aaPredicted RBP13.63□□□□□ -0.23
KCNIP3-206ENST00000475491 AFDNP55196 1824 aaKnown RBP13.63□□□□□ -0.23
KCNIP3-206ENST00000475491 PDE8BO95263 885 aa13.62□□□□□ -0.23
KCNIP3-206ENST00000475491 NFIXQ14938 502 aa13.62□□□□□ -0.23
KCNIP3-206ENST00000475491 PIH1D3Q9NQM4 214 aaKnown RBP13.62□□□□□ -0.23
KCNIP3-206ENST00000475491 DOT1LQ8TEK3 1739 aa13.62□□□□□ -0.23
KCNIP3-206ENST00000475491 ZKSCAN1P17029 563 aaPredicted RBP13.62□□□□□ -0.23
KCNIP3-206ENST00000475491 RXRAP19793 462 aa13.62□□□□□ -0.23
KCNIP3-206ENST00000475491 MTMR7Q9Y216 660 aa13.62□□□□□ -0.23
KCNIP3-206ENST00000475491 PLCH1Q4KWH8 1693 aa13.62□□□□□ -0.23
KCNIP3-206ENST00000475491 ABCC12Q96J65 1359 aa13.62□□□□□ -0.23
KCNIP3-206ENST00000475491 BAG4O95429 457 aaKnown RBP13.62□□□□□ -0.23
KCNIP3-206ENST00000475491 CSF1RP07333 972 aa13.62□□□□□ -0.23
KCNIP3-206ENST00000475491 CCT2P78371 535 aaKnown RBP13.62□□□□□ -0.23
KCNIP3-206ENST00000475491 ANKRD18AQ8IVF6 992 aa13.62□□□□□ -0.23
KCNIP3-206ENST00000475491 LRP2BPQ9P2M1 347 aa13.62□□□□□ -0.23
KCNIP3-206ENST00000475491 RAD50Q92878 1312 aa13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 SHANK3Q9BYB0 1731 aa13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 RAB3GAP1Q15042 981 aa13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 NLRP3Q96P20 1036 aa13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 HAUS7Q99871 368 aa13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 PDCL3Q9H2J4 239 aa13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 PDRG1Q9NUG6 133 aa13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 NSFL1CQ9UNZ2 370 aaKnown RBP13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 ERVV-1B6SEH8 477 aa13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 SLC27A2O14975 620 aa13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 EN1Q05925 392 aaPredicted RBP13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 DEFB132Q7Z7B7 95 aa13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 TXNRD3Q86VQ6 643 aa13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 CCDC144CPQ8IYA2 1237 aa13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 MAGEB6Q8N7X4 407 aa13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 RAI14Q9P0K7 980 aa13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 RPS6KA4O75676 772 aa13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 CYP2E1P05181 493 aaPredicted RBP13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 CDK11BP21127 795 aaKnown RBP13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 HSPA4P34932 840 aa13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 TXNRD1Q16881 649 aa13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 KBTBD3Q8NAB2 608 aa13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 FAM13BQ9NYF5 915 aa13.61□□□□□ -0.23
KCNIP3-206ENST00000475491 RIMBP2O15034 1052 aa13.6□□□□□ -0.23
KCNIP3-206ENST00000475491 PRKAB2O43741 272 aa13.6□□□□□ -0.23
KCNIP3-206ENST00000475491 TRIM28Q13263 835 aaKnown RBP13.6□□□□□ -0.23
KCNIP3-206ENST00000475491 RASGRF1Q13972 1273 aa13.6□□□□□ -0.23
KCNIP3-206ENST00000475491 FAM173BQ6P4H8 233 aa13.6□□□□□ -0.23
KCNIP3-206ENST00000475491 PROM2Q8N271 834 aa13.6□□□□□ -0.23
KCNIP3-206ENST00000475491 DDX11L8A8MPP1 907 aa13.6□□□□□ -0.23
KCNIP3-206ENST00000475491 MPNDQ8N594 471 aa13.6□□□□□ -0.23
KCNIP3-206ENST00000475491 VPS37CA5D8V6 355 aaPredicted RBP13.6□□□□□ -0.23
KCNIP3-206ENST00000475491 AKAP2Q9Y2D5 859 aa13.6□□□□□ -0.23
KCNIP3-206ENST00000475491 MCMDC2Q4G0Z9 681 aa13.59□□□□□ -0.23
KCNIP3-206ENST00000475491 TPTE2Q6XPS3 522 aa13.59□□□□□ -0.23
KCNIP3-206ENST00000475491 CCDC82Q8N4S0 544 aa13.59□□□□□ -0.23
KCNIP3-206ENST00000475491 CNBD1Q8NA66 436 aa13.59□□□□□ -0.23
KCNIP3-206ENST00000475491 ARMT1Q9H993 441 aa13.59□□□□□ -0.23
KCNIP3-206ENST00000475491 F8W031 263 aaPredicted RBP13.59□□□□□ -0.23
KCNIP3-206ENST00000475491 RUFY3Q7L099 469 aa13.59□□□□□ -0.23
KCNIP3-206ENST00000475491 ZNF609O15014 1411 aa13.59□□□□□ -0.23
KCNIP3-206ENST00000475491 GUCY1B3Q02153 619 aa13.59□□□□□ -0.23
KCNIP3-206ENST00000475491 POTEAQ6S8J7 498 aa13.59□□□□□ -0.23
KCNIP3-206ENST00000475491 RNF214Q8ND24 703 aa13.59□□□□□ -0.23
KCNIP3-206ENST00000475491 NCOA5Q9HCD5 579 aaKnown RBP13.59□□□□□ -0.23
KCNIP3-206ENST00000475491 ARFGEF2Q9Y6D5 1785 aa13.58□□□□□ -0.23
KCNIP3-206ENST00000475491 MAST3O60307 1309 aa13.58□□□□□ -0.23
KCNIP3-206ENST00000475491 TAF1P21675 1872 aa13.58□□□□□ -0.23
KCNIP3-206ENST00000475491 CYP21A2P08686 494 aa13.58□□□□□ -0.24
KCNIP3-206ENST00000475491 GAS2L3Q86XJ1 694 aa13.58□□□□□ -0.24
KCNIP3-206ENST00000475491 HMG20BQ9P0W2 317 aa13.58□□□□□ -0.24
KCNIP3-206ENST00000475491 NARFQ9UHQ1 456 aa13.58□□□□□ -0.24
KCNIP3-206ENST00000475491 CYP46A1Q9Y6A2 500 aa13.58□□□□□ -0.24
KCNIP3-206ENST00000475491 GLI3P10071 1580 aa13.58□□□□□ -0.24
KCNIP3-206ENST00000475491 ZKSCAN3Q9BRR0 538 aa13.58□□□□□ -0.24
KCNIP3-206ENST00000475491 ZNF532Q9HCE3 1301 aa13.58□□□□□ -0.24
KCNIP3-206ENST00000475491 XRCC6P12956 609 aaKnown RBP eCLIP13.58□□□□□ -0.24
KCNIP3-206ENST00000475491 BLOC1S2Q6QNY1 142 aa13.58□□□□□ -0.24
KCNIP3-206ENST00000475491 BRF1Q92994 677 aa13.58□□□□□ -0.24
KCNIP3-206ENST00000475491 MINDY4BA8MYZ0 360 aa13.57□□□□□ -0.24
KCNIP3-206ENST00000475491 RNF113AO15541 343 aaKnown RBP13.57□□□□□ -0.24
KCNIP3-206ENST00000475491 SLC5A1P13866 664 aa13.57□□□□□ -0.24
KCNIP3-206ENST00000475491 RXRBP28702 533 aa13.57□□□□□ -0.24
KCNIP3-206ENST00000475491 ZNF827Q17R98 1081 aa13.57□□□□□ -0.24
KCNIP3-206ENST00000475491 CYP2D7A0A087X1C5 515 aa13.57□□□□□ -0.24
KCNIP3-206ENST00000475491 RPS8P62241 208 aaKnown RBP13.57□□□□□ -0.24
KCNIP3-206ENST00000475491 PUM3Q15397 648 aaKnown RBP13.57□□□□□ -0.24
KCNIP3-206ENST00000475491 PARP10Q53GL7 1025 aa13.57□□□□□ -0.24
KCNIP3-206ENST00000475491 NKX2-3Q8TAU0 364 aa13.57□□□□□ -0.24
KCNIP3-206ENST00000475491 SDR42E1Q8WUS8 393 aa13.57□□□□□ -0.24
KCNIP3-206ENST00000475491 CEBPZQ03701 1054 aaKnown RBP13.57□□□□□ -0.24
KCNIP3-206ENST00000475491 EVX2Q03828 476 aa13.57□□□□□ -0.24
KCNIP3-206ENST00000475491 GPAA1O43292 621 aa13.56□□□□□ -0.24
KCNIP3-206ENST00000475491 HSPD1P10809 573 aaKnown RBP13.56□□□□□ -0.24
KCNIP3-206ENST00000475491 STOX1Q6ZVD7 989 aa13.56□□□□□ -0.24
KCNIP3-206ENST00000475491 ZNF622Q969S3 477 aaKnown RBP eCLIP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms