RNA–Protein interactions for RNA: ENST00000475237.5

CACNA2D1-209, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 1, humanhuman

TSL 3

Gene CACNA2D1, Length 419 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1-209ENST00000475237 MTMR3Q13615 1198 aa8.49□□□□□ -1.05
CACNA2D1-209ENST00000475237 HFE2Q6ZVN8 426 aa8.49□□□□□ -1.05
CACNA2D1-209ENST00000475237 TMEM130Q8N3G9 435 aa8.49□□□□□ -1.05
CACNA2D1-209ENST00000475237 DCAF11Q8TEB1 546 aa8.49□□□□□ -1.05
CACNA2D1-209ENST00000475237 SRA1Q9HD15 236 aaKnown RBP8.48□□□□□ -1.05
CACNA2D1-209ENST00000475237 TLR7Q9NYK1 1049 aaKnown RBP8.48□□□□□ -1.05
CACNA2D1-209ENST00000475237 COL17A1Q9UMD9 1497 aaPredicted RBP8.47□□□□□ -1.05
CACNA2D1-209ENST00000475237 ZC3H6P61129 1189 aaKnown RBP8.47□□□□□ -1.05
CACNA2D1-209ENST00000475237 C11orf91Q3C1V1 193 aa8.47□□□□□ -1.05
CACNA2D1-209ENST00000475237 CAPN12Q6ZSI9 719 aa8.47□□□□□ -1.05
CACNA2D1-209ENST00000475237 PLD4Q96BZ4 506 aa8.47□□□□□ -1.05
CACNA2D1-209ENST00000475237 QTRT2Q9H974 415 aaKnown RBP8.47□□□□□ -1.05
CACNA2D1-209ENST00000475237 F8W735 103 aaPredicted RBP8.46□□□□□ -1.06
CACNA2D1-209ENST00000475237 PAX4O43316 350 aa8.46□□□□□ -1.06
CACNA2D1-209ENST00000475237 ALX3O95076 343 aa8.46□□□□□ -1.06
CACNA2D1-209ENST00000475237 SSTR4P31391 388 aa8.46□□□□□ -1.06
CACNA2D1-209ENST00000475237 NAA30Q147X3 362 aaPredicted RBP8.46□□□□□ -1.06
CACNA2D1-209ENST00000475237 ALKBH2Q6NS38 261 aa8.46□□□□□ -1.06
CACNA2D1-209ENST00000475237 C16orf46Q6P387 395 aa8.46□□□□□ -1.06
CACNA2D1-209ENST00000475237 MAP4K3Q8IVH8 894 aa8.46□□□□□ -1.06
CACNA2D1-209ENST00000475237 SREK1Q8WXA9 508 aaKnown RBP8.46□□□□□ -1.06
CACNA2D1-209ENST00000475237 KRTAP9-9Q9BYP9 154 aa8.46□□□□□ -1.06
CACNA2D1-209ENST00000475237 KRTAP9-4Q9BYQ2 154 aa8.46□□□□□ -1.06
CACNA2D1-209ENST00000475237 EGFRP00533 1210 aa8.45□□□□□ -1.06
CACNA2D1-209ENST00000475237 TMC7Q7Z402 723 aa8.45□□□□□ -1.06
CACNA2D1-209ENST00000475237 MYO19Q96H55 970 aa8.45□□□□□ -1.06
CACNA2D1-209ENST00000475237 BRPF3Q9ULD4 1205 aa8.45□□□□□ -1.06
CACNA2D1-209ENST00000475237 RTCBQ9Y3I0 505 aaKnown RBP8.45□□□□□ -1.06
CACNA2D1-209ENST00000475237 LOC102724428A0A0B4J2F2 783 aa8.44□□□□□ -1.06
CACNA2D1-209ENST00000475237 GSC2O15499 205 aa8.44□□□□□ -1.06
CACNA2D1-209ENST00000475237 TREHO43280 583 aa8.44□□□□□ -1.06
CACNA2D1-209ENST00000475237 GHRHP01286 108 aa8.44□□□□□ -1.06
CACNA2D1-209ENST00000475237 PSAPP07602 524 aa8.44□□□□□ -1.06
CACNA2D1-209ENST00000475237 MPSTP25325 297 aa8.44□□□□□ -1.06
CACNA2D1-209ENST00000475237 CD97P48960 835 aa8.44□□□□□ -1.06
CACNA2D1-209ENST00000475237 SIK1P57059 783 aa8.44□□□□□ -1.06
CACNA2D1-209ENST00000475237 TAGLNQ01995 201 aaKnown RBP8.44□□□□□ -1.06
CACNA2D1-209ENST00000475237 FMR1Q06787 632 aaKnown RBP eCLIP8.44□□□□□ -1.06
CACNA2D1-209ENST00000475237 GDF6Q6KF10 455 aaPredicted RBP8.44□□□□□ -1.06
CACNA2D1-209ENST00000475237 IL22RA1Q8N6P7 574 aa8.44□□□□□ -1.06
CACNA2D1-209ENST00000475237 DMRTB1Q96MA1 342 aa8.44□□□□□ -1.06
CACNA2D1-209ENST00000475237 DRC1Q96MC2 740 aa8.44□□□□□ -1.06
CACNA2D1-209ENST00000475237 RBSNQ9H1K0 784 aa8.44□□□□□ -1.06
CACNA2D1-209ENST00000475237 J3QW42 95 aa8.43□□□□□ -1.06
CACNA2D1-209ENST00000475237 OPLAHO14841 1288 aa8.43□□□□□ -1.06
CACNA2D1-209ENST00000475237 XYLBO75191 536 aa8.43□□□□□ -1.06
CACNA2D1-209ENST00000475237 P4HBP07237 508 aaKnown RBP8.43□□□□□ -1.06
CACNA2D1-209ENST00000475237 TXKP42681 527 aa8.43□□□□□ -1.06
CACNA2D1-209ENST00000475237 MRPL58Q14197 206 aaKnown RBP8.43□□□□□ -1.06
CACNA2D1-209ENST00000475237 TSNAXIP1Q2TAA8 658 aa8.43□□□□□ -1.06
CACNA2D1-209ENST00000475237 Q6ZS46 218 aa8.43□□□□□ -1.06
CACNA2D1-209ENST00000475237 SCAMP3O14828 347 aaKnown RBP8.42□□□□□ -1.06
CACNA2D1-209ENST00000475237 HMGB1P09429 215 aaKnown RBP8.42□□□□□ -1.06
CACNA2D1-209ENST00000475237 PDE3BQ13370 1112 aa8.42□□□□□ -1.06
CACNA2D1-209ENST00000475237 SF3A1Q15459 793 aaKnown RBP8.42□□□□□ -1.06
CACNA2D1-209ENST00000475237 CACTIN-AS1Q8N1I8 211 aa8.42□□□□□ -1.06
CACNA2D1-209ENST00000475237 USP20Q9Y2K6 914 aa8.42□□□□□ -1.06
CACNA2D1-209ENST00000475237 RAXQ9Y2V3 346 aa8.42□□□□□ -1.06
CACNA2D1-209ENST00000475237 GLB1P16278 677 aa8.41□□□□□ -1.06
CACNA2D1-209ENST00000475237 SOX18P35713 384 aa8.41□□□□□ -1.06
CACNA2D1-209ENST00000475237 IRAK1P51617 712 aa8.41□□□□□ -1.06
CACNA2D1-209ENST00000475237 SETDB1Q15047 1291 aa8.41□□□□□ -1.06
CACNA2D1-209ENST00000475237 CMTR1Q8N1G2 835 aaKnown RBP8.41□□□□□ -1.06
CACNA2D1-209ENST00000475237 ABTB2Q8N961 1025 aa8.41□□□□□ -1.06
CACNA2D1-209ENST00000475237 NSUN5Q96P11 429 aaKnown RBP8.41□□□□□ -1.06
CACNA2D1-209ENST00000475237 MUC3BQ9H195 1237 aa8.41□□□□□ -1.06
CACNA2D1-209ENST00000475237 STIM2Q9P246 746 aa8.41□□□□□ -1.06
CACNA2D1-209ENST00000475237 MMP20O60882 483 aa8.4□□□□□ -1.06
CACNA2D1-209ENST00000475237 PRPF40AO75400 957 aaKnown RBP8.4□□□□□ -1.06
CACNA2D1-209ENST00000475237 HOXD8P13378 290 aaPredicted RBP8.4□□□□□ -1.06
CACNA2D1-209ENST00000475237 EIF1AXP47813 144 aaKnown RBP8.4□□□□□ -1.06
CACNA2D1-209ENST00000475237 COBLO75128 1261 aa8.39□□□□□ -1.07
CACNA2D1-209ENST00000475237 IGLV1-40P01703 118 aa8.39□□□□□ -1.07
CACNA2D1-209ENST00000475237 XPCQ01831 940 aaPredicted RBP8.39□□□□□ -1.07
CACNA2D1-209ENST00000475237 DSC3Q14574 896 aa8.39□□□□□ -1.07
CACNA2D1-209ENST00000475237 TREML1Q86YW5 311 aa8.39□□□□□ -1.07
CACNA2D1-209ENST00000475237 AGGF1Q8N302 714 aaeCLIP8.39□□□□□ -1.07
CACNA2D1-209ENST00000475237 TMC1Q8TDI8 760 aa8.39□□□□□ -1.07
CACNA2D1-209ENST00000475237 ALKBH8Q96BT7 664 aaKnown RBP8.39□□□□□ -1.07
CACNA2D1-209ENST00000475237 BACH2Q9BYV9 841 aa8.39□□□□□ -1.07
CACNA2D1-209ENST00000475237 STOML1Q9UBI4 398 aa8.39□□□□□ -1.07
CACNA2D1-209ENST00000475237 ATP2B2Q01814 1243 aa8.38□□□□□ -1.07
CACNA2D1-209ENST00000475237 PLCB3Q01970 1234 aa8.38□□□□□ -1.07
CACNA2D1-209ENST00000475237 AAMPQ13685 434 aa8.38□□□□□ -1.07
CACNA2D1-209ENST00000475237 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.38□□□□□ -1.07
CACNA2D1-209ENST00000475237 FMNL2Q96PY5 1086 aa8.38□□□□□ -1.07
CACNA2D1-209ENST00000475237 FAM129BQ96TA1 746 aa8.38□□□□□ -1.07
CACNA2D1-209ENST00000475237 SAP130Q9H0E3 1048 aa8.38□□□□□ -1.07
CACNA2D1-209ENST00000475237 LRFN2Q9ULH4 789 aa8.38□□□□□ -1.07
CACNA2D1-209ENST00000475237 PPME1Q9Y570 386 aa8.38□□□□□ -1.07
CACNA2D1-209ENST00000475237 KCNMB2Q9Y691 235 aa8.38□□□□□ -1.07
CACNA2D1-209ENST00000475237 KIAA1324LA8MWY0 1029 aaPredicted RBP8.37□□□□□ -1.07
CACNA2D1-209ENST00000475237 TNFRSF10BO14763 440 aa8.37□□□□□ -1.07
CACNA2D1-209ENST00000475237 FZD6O60353 706 aa8.37□□□□□ -1.07
CACNA2D1-209ENST00000475237 LDHBP07195 334 aaKnown RBP8.37□□□□□ -1.07
CACNA2D1-209ENST00000475237 ERCC5P28715 1186 aaPredicted RBP8.37□□□□□ -1.07
CACNA2D1-209ENST00000475237 EHHADHQ08426 723 aa8.37□□□□□ -1.07
CACNA2D1-209ENST00000475237 NAALADL2Q58DX5 795 aa8.37□□□□□ -1.07
CACNA2D1-209ENST00000475237 COX20Q5RI15 118 aa8.37□□□□□ -1.07
CACNA2D1-209ENST00000475237 UBXN4Q92575 508 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms