RNA–Protein interactions for RNA: ENST00000475237.5

CACNA2D1-209, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 1, humanhuman

TSL 3

Gene CACNA2D1, Length 419 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1-209ENST00000475237 AEBP2Q6ZN18 517 aaPredicted RBP29.58■■■□□ 2.33
CACNA2D1-209ENST00000475237 CHIC1Q5VXU3 224 aa28.02■■■□□ 2.08
CACNA2D1-209ENST00000475237 SENP3Q9H4L4 574 aaPredicted RBP25.32■■□□□ 1.64
CACNA2D1-209ENST00000475237 PHF23Q9BUL5 403 aaPredicted RBP24.95■■□□□ 1.58
CACNA2D1-209ENST00000475237 FOXD1Q16676 465 aa23.57■■□□□ 1.36
CACNA2D1-209ENST00000475237 PLPPR3Q6T4P5 718 aa22.37■■□□□ 1.17
CACNA2D1-209ENST00000475237 MSH5O43196 834 aa22.17■■□□□ 1.14
CACNA2D1-209ENST00000475237 PIAS4Q8N2W9 510 aaPredicted RBP22.03■■□□□ 1.12
CACNA2D1-209ENST00000475237 PPP6R1Q9UPN7 881 aa21.92■■□□□ 1.1
CACNA2D1-209ENST00000475237 ADRA2BP18089 450 aa21.86■■□□□ 1.09
CACNA2D1-209ENST00000475237 POTEDQ86YR6 584 aa21.78■■□□□ 1.08
CACNA2D1-209ENST00000475237 MAPK8IP2Q13387 824 aaPredicted RBP20.1■□□□□ 0.81
CACNA2D1-209ENST00000475237 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
CACNA2D1-209ENST00000475237 DMRT2Q9Y5R5 561 aa20.04■□□□□ 0.8
CACNA2D1-209ENST00000475237 PPP4R3CPQ6ZMV5 832 aa19.56■□□□□ 0.72
CACNA2D1-209ENST00000475237 HOXD11P31277 338 aaPredicted RBP19.26■□□□□ 0.67
CACNA2D1-209ENST00000475237 DCAF8L1A6NGE4 600 aa19.25■□□□□ 0.67
CACNA2D1-209ENST00000475237 CNKSR2Q8WXI2 1034 aa19.25■□□□□ 0.67
CACNA2D1-209ENST00000475237 RNF216Q9NWF9 866 aaPredicted RBP19.1■□□□□ 0.65
CACNA2D1-209ENST00000475237 CACNB1Q02641 598 aaPredicted RBP19.08■□□□□ 0.64
CACNA2D1-209ENST00000475237 RNF39Q9H2S5 420 aa18.86■□□□□ 0.61
CACNA2D1-209ENST00000475237 NCBP3Q53F19 620 aaKnown RBP18.82■□□□□ 0.6
CACNA2D1-209ENST00000475237 DNAJC5BQ9UF47 199 aa18.66■□□□□ 0.58
CACNA2D1-209ENST00000475237 C1QBPQ07021 282 aaKnown RBP18.62■□□□□ 0.57
CACNA2D1-209ENST00000475237 NPM3O75607 178 aaKnown RBP18.49■□□□□ 0.55
CACNA2D1-209ENST00000475237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.38■□□□□ 0.53
CACNA2D1-209ENST00000475237 KCNA4P22459 653 aa18.02■□□□□ 0.48
CACNA2D1-209ENST00000475237 U3KPZ7 1027 aaPredicted RBP17.93■□□□□ 0.46
CACNA2D1-209ENST00000475237 CAPN15O75808 1086 aa17.72■□□□□ 0.43
CACNA2D1-209ENST00000475237 SPINK5Q9NQ38 1064 aaPredicted RBP17.7■□□□□ 0.42
CACNA2D1-209ENST00000475237 SLC4A2P04920 1241 aa17.67■□□□□ 0.42
CACNA2D1-209ENST00000475237 DSG3P32926 999 aa17.62■□□□□ 0.41
CACNA2D1-209ENST00000475237 APLP2Q06481 763 aa17.51■□□□□ 0.39
CACNA2D1-209ENST00000475237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.46■□□□□ 0.39
CACNA2D1-209ENST00000475237 HNRNPUL2Q1KMD3 747 aaKnown RBP17.46■□□□□ 0.39
CACNA2D1-209ENST00000475237 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
CACNA2D1-209ENST00000475237 ZNF219Q9P2Y4 722 aaPredicted RBP17.39■□□□□ 0.37
CACNA2D1-209ENST00000475237 SAMD1Q6SPF0 538 aaPredicted RBP17.34■□□□□ 0.37
CACNA2D1-209ENST00000475237 ABCB7O75027 752 aa17.27■□□□□ 0.36
CACNA2D1-209ENST00000475237 MYCNP04198 464 aaPredicted RBP17.14■□□□□ 0.33
CACNA2D1-209ENST00000475237 POTEHQ6S545 545 aa17.07■□□□□ 0.32
CACNA2D1-209ENST00000475237 SLC4A1APQ9BWU0 796 aaKnown RBP17.02■□□□□ 0.32
CACNA2D1-209ENST00000475237 POLA2Q14181 598 aa16.9■□□□□ 0.3
CACNA2D1-209ENST00000475237 FOXD4L1Q9NU39 408 aa16.89■□□□□ 0.29
CACNA2D1-209ENST00000475237 RBM42Q9BTD8 480 aaKnown RBP16.88■□□□□ 0.29
CACNA2D1-209ENST00000475237 ATF5Q9Y2D1 282 aaPredicted RBP16.69■□□□□ 0.26
CACNA2D1-209ENST00000475237 ZBTB12Q9Y330 459 aaPredicted RBP16.6■□□□□ 0.25
CACNA2D1-209ENST00000475237 ZBTB22O15209 634 aa16.53■□□□□ 0.24
CACNA2D1-209ENST00000475237 CHRDL2Q6WN34 429 aa16.51■□□□□ 0.23
CACNA2D1-209ENST00000475237 AKT1S1Q96B36 256 aa16.44■□□□□ 0.22
CACNA2D1-209ENST00000475237 ATXN8OSP0DMR3 200 aa16.4■□□□□ 0.22
CACNA2D1-209ENST00000475237 OSCARQ8IYS5 282 aa16.35■□□□□ 0.21
CACNA2D1-209ENST00000475237 REM2Q8IYK8 340 aaPredicted RBP16.26■□□□□ 0.19
CACNA2D1-209ENST00000475237 FBLN2P98095 1184 aa16.13■□□□□ 0.17
CACNA2D1-209ENST00000475237 PITPNM1O00562 1244 aa16.08■□□□□ 0.16
CACNA2D1-209ENST00000475237 PIP4P2Q8N4L2 257 aa16.08■□□□□ 0.16
CACNA2D1-209ENST00000475237 SPDYE2BA6NHP3 402 aa16.06■□□□□ 0.16
CACNA2D1-209ENST00000475237 SPDYE6P0CI01 402 aa16.06■□□□□ 0.16
CACNA2D1-209ENST00000475237 SPDYE2Q495Y8 402 aa16.06■□□□□ 0.16
CACNA2D1-209ENST00000475237 FXR2P51116 673 aaKnown RBP eCLIP15.98■□□□□ 0.15
CACNA2D1-209ENST00000475237 SP7Q8TDD2 431 aaPredicted RBP15.95■□□□□ 0.14
CACNA2D1-209ENST00000475237 MKRN4PQ13434 485 aaPredicted RBP15.92■□□□□ 0.14
CACNA2D1-209ENST00000475237 HAX1O00165 279 aa15.85■□□□□ 0.13
CACNA2D1-209ENST00000475237 ZNF692Q9BU19 519 aaPredicted RBP15.84■□□□□ 0.13
CACNA2D1-209ENST00000475237 SPDYE1Q8NFV5 336 aaPredicted RBP15.81■□□□□ 0.12
CACNA2D1-209ENST00000475237 SSUH2Q9Y2M2 353 aa15.8■□□□□ 0.12
CACNA2D1-209ENST00000475237 CLEC11AQ9Y240 323 aa15.78■□□□□ 0.12
CACNA2D1-209ENST00000475237 CSRNP3Q8WYN3 585 aa15.69■□□□□ 0.1
CACNA2D1-209ENST00000475237 PRKAR2AP13861 404 aaKnown RBP15.68■□□□□ 0.1
CACNA2D1-209ENST00000475237 PABPN1Q86U42 306 aaKnown RBP eCLIP15.58■□□□□ 0.08
CACNA2D1-209ENST00000475237 EVX2Q03828 476 aa15.57■□□□□ 0.08
CACNA2D1-209ENST00000475237 PRR29P0C7W0 189 aa15.51■□□□□ 0.07
CACNA2D1-209ENST00000475237 C19orf67A6NJJ6 358 aa15.46■□□□□ 0.07
CACNA2D1-209ENST00000475237 CHADLQ6NUI6 762 aa15.45■□□□□ 0.06
CACNA2D1-209ENST00000475237 EHMT2Q96KQ7 1210 aa15.43■□□□□ 0.06
CACNA2D1-209ENST00000475237 GABBR2O75899 941 aa15.26■□□□□ 0.03
CACNA2D1-209ENST00000475237 FARP1Q9Y4F1 1045 aaPredicted RBP15.24■□□□□ 0.03
CACNA2D1-209ENST00000475237 STAG3Q9UJ98 1225 aa15.19■□□□□ 0.02
CACNA2D1-209ENST00000475237 CD44P16070 742 aaKnown RBP15.18■□□□□ 0.02
CACNA2D1-209ENST00000475237 SPDYE4A6NLX3 237 aa15.15■□□□□ 0.02
CACNA2D1-209ENST00000475237 CLCN6P51797 869 aa15.06■□□□□ 0
CACNA2D1-209ENST00000475237 CREBZFQ9NS37 354 aa15.05■□□□□ -0
CACNA2D1-209ENST00000475237 LHX8Q68G74 356 aa14.96□□□□□ -0.01
CACNA2D1-209ENST00000475237 ZRANB1Q9UGI0 708 aa14.95□□□□□ -0.02
CACNA2D1-209ENST00000475237 ZNF579Q8NAF0 562 aaKnown RBP14.94□□□□□ -0.02
CACNA2D1-209ENST00000475237 POTEIP0CG38 1075 aa14.9□□□□□ -0.02
CACNA2D1-209ENST00000475237 DCBLD2Q96PD2 775 aa14.87□□□□□ -0.03
CACNA2D1-209ENST00000475237 PAK3O75914 559 aaPredicted RBP14.85□□□□□ -0.03
CACNA2D1-209ENST00000475237 NPM1P06748 294 aaKnown RBP eCLIP14.84□□□□□ -0.03
CACNA2D1-209ENST00000475237 MNX1P50219 401 aaPredicted RBP14.77□□□□□ -0.05
CACNA2D1-209ENST00000475237 PROM2Q8N271 834 aa14.75□□□□□ -0.05
CACNA2D1-209ENST00000475237 GALR2O43603 387 aaPredicted RBP14.74□□□□□ -0.05
CACNA2D1-209ENST00000475237 PHF12Q96QT6 1004 aa14.7□□□□□ -0.06
CACNA2D1-209ENST00000475237 PLEKHG5O94827 1062 aa14.54□□□□□ -0.08
CACNA2D1-209ENST00000475237 TSPYL2Q9H2G4 693 aaPredicted RBP14.52□□□□□ -0.09
CACNA2D1-209ENST00000475237 MS4A3Q96HJ5 214 aa14.51□□□□□ -0.09
CACNA2D1-209ENST00000475237 MIER1Q8N108 512 aa14.49□□□□□ -0.09
CACNA2D1-209ENST00000475237 CCDC61Q9Y6R9 512 aa14.46□□□□□ -0.09
CACNA2D1-209ENST00000475237 ASTLQ6HA08 431 aaPredicted RBP14.45□□□□□ -0.1
CACNA2D1-209ENST00000475237 PELP1Q8IZL8 1130 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms