RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 SNPHO15079 494 aa9.46□□□□□ -0.9
CCDC93-207ENST00000474006 IGHDP01880 384 aa9.46□□□□□ -0.9
CCDC93-207ENST00000474006 ST5P78524 1137 aa9.46□□□□□ -0.9
CCDC93-207ENST00000474006 CEP85Q6P2H3 762 aa9.46□□□□□ -0.9
CCDC93-207ENST00000474006 PADI6Q6TGC4 694 aa9.46□□□□□ -0.9
CCDC93-207ENST00000474006 TTLL11Q8NHH1 800 aa9.46□□□□□ -0.9
CCDC93-207ENST00000474006 NLRP3Q96P20 1036 aa9.46□□□□□ -0.9
CCDC93-207ENST00000474006 REPIN1Q9BWE0 567 aaKnown RBP9.46□□□□□ -0.9
CCDC93-207ENST00000474006 GPCPD1Q9NPB8 672 aa9.46□□□□□ -0.9
CCDC93-207ENST00000474006 TAF1LQ8IZX4 1826 aa9.45□□□□□ -0.9
CCDC93-207ENST00000474006 PNMA6EA0A0J9YXQ4 647 aa9.45□□□□□ -0.9
CCDC93-207ENST00000474006 SRGAP3O43295 1099 aa9.45□□□□□ -0.9
CCDC93-207ENST00000474006 POLD1P28340 1107 aa9.45□□□□□ -0.9
CCDC93-207ENST00000474006 CTSWP56202 376 aa9.45□□□□□ -0.9
CCDC93-207ENST00000474006 SF3B3Q15393 1217 aaKnown RBP9.45□□□□□ -0.9
CCDC93-207ENST00000474006 RABL6Q3YEC7 729 aaPredicted RBP9.45□□□□□ -0.9
CCDC93-207ENST00000474006 METTL3Q86U44 580 aaKnown RBP9.45□□□□□ -0.9
CCDC93-207ENST00000474006 CCDC85AQ96PX6 553 aaPredicted RBP9.45□□□□□ -0.9
CCDC93-207ENST00000474006 PHOX2BQ99453 314 aa9.45□□□□□ -0.9
CCDC93-207ENST00000474006 BRIP1Q9BX63 1249 aa9.45□□□□□ -0.9
CCDC93-207ENST00000474006 RWDD1Q9H446 243 aaPredicted RBP9.45□□□□□ -0.9
CCDC93-207ENST00000474006 PPP4R2Q9NY27 417 aa9.45□□□□□ -0.9
CCDC93-207ENST00000474006 CHMP3Q9Y3E7 222 aa9.45□□□□□ -0.9
CCDC93-207ENST00000474006 ADGRG1Q9Y653 693 aa9.45□□□□□ -0.9
CCDC93-207ENST00000474006 KLRG2A4D1S0 409 aaPredicted RBP9.44□□□□□ -0.9
CCDC93-207ENST00000474006 MTX1Q13505 466 aa9.44□□□□□ -0.9
CCDC93-207ENST00000474006 CCDC152Q4G0S7 254 aa9.44□□□□□ -0.9
CCDC93-207ENST00000474006 PPP4R3BQ5MIZ7 849 aa9.44□□□□□ -0.9
CCDC93-207ENST00000474006 SSH3Q8TE77 659 aa9.44□□□□□ -0.9
CCDC93-207ENST00000474006 GREM2Q9H772 168 aa9.44□□□□□ -0.9
CCDC93-207ENST00000474006 LHX6Q9UPM6 363 aa9.44□□□□□ -0.9
CCDC93-207ENST00000474006 NUP188Q5SRE5 1749 aa9.43□□□□□ -0.9
CCDC93-207ENST00000474006 HMMRO75330 724 aa9.43□□□□□ -0.9
CCDC93-207ENST00000474006 ITGA6P23229 1130 aa9.43□□□□□ -0.9
CCDC93-207ENST00000474006 PDE6BP35913 854 aa9.43□□□□□ -0.9
CCDC93-207ENST00000474006 PRSS12P56730 875 aa9.43□□□□□ -0.9
CCDC93-207ENST00000474006 MDM2Q00987 491 aaPredicted RBP9.43□□□□□ -0.9
CCDC93-207ENST00000474006 IFIT5Q13325 482 aaKnown RBP9.43□□□□□ -0.9
CCDC93-207ENST00000474006 HDAC1Q13547 482 aaPredicted RBP9.43□□□□□ -0.9
CCDC93-207ENST00000474006 CCDC57Q2TAC2 916 aa9.43□□□□□ -0.9
CCDC93-207ENST00000474006 B4GALNT3Q6L9W6 998 aa9.43□□□□□ -0.9
CCDC93-207ENST00000474006 PXYLP1Q8TE99 480 aa9.43□□□□□ -0.9
CCDC93-207ENST00000474006 CCDC136Q96JN2 1154 aa9.43□□□□□ -0.9
CCDC93-207ENST00000474006 SPON1Q9HCB6 807 aa9.43□□□□□ -0.9
CCDC93-207ENST00000474006 SEC31BQ9NQW1 1179 aa9.43□□□□□ -0.9
CCDC93-207ENST00000474006 UBR3Q6ZT12 1888 aa9.42□□□□□ -0.9
CCDC93-207ENST00000474006 ABCC12Q96J65 1359 aa9.42□□□□□ -0.9
CCDC93-207ENST00000474006 ANKRD18BA2A2Z9 1011 aa9.42□□□□□ -0.9
CCDC93-207ENST00000474006 HOXB1P14653 301 aaPredicted RBP9.42□□□□□ -0.9
CCDC93-207ENST00000474006 RFX5P48382 616 aaPredicted RBP9.42□□□□□ -0.9
CCDC93-207ENST00000474006 PTPN12Q05209 780 aaKnown RBP9.42□□□□□ -0.9
CCDC93-207ENST00000474006 FAM161AQ3B820 660 aa9.42□□□□□ -0.9
CCDC93-207ENST00000474006 KLHDC4Q8TBB5 520 aa9.42□□□□□ -0.9
CCDC93-207ENST00000474006 ZNF594Q96JF6 807 aaPredicted RBP9.42□□□□□ -0.9
CCDC93-207ENST00000474006 PA2G4Q9UQ80 394 aaKnown RBP9.42□□□□□ -0.9
CCDC93-207ENST00000474006 CACNA1FO60840 1977 aa9.41□□□□□ -0.9
CCDC93-207ENST00000474006 H0YIN7 160 aa9.41□□□□□ -0.9
CCDC93-207ENST00000474006 SURF6O75683 361 aaKnown RBP9.41□□□□□ -0.9
CCDC93-207ENST00000474006 HOXA10P31260 410 aaPredicted RBP9.41□□□□□ -0.9
CCDC93-207ENST00000474006 CRY2Q49AN0 593 aa9.41□□□□□ -0.9
CCDC93-207ENST00000474006 DDX46Q7L014 1031 aaKnown RBP9.41□□□□□ -0.9
CCDC93-207ENST00000474006 C2CD5Q86YS7 1000 aa9.41□□□□□ -0.9
CCDC93-207ENST00000474006 RPGRQ92834 1020 aaKnown RBP9.41□□□□□ -0.9
CCDC93-207ENST00000474006 RBM17Q96I25 401 aaKnown RBP9.41□□□□□ -0.9
CCDC93-207ENST00000474006 DCTPP1Q9H773 170 aa9.41□□□□□ -0.9
CCDC93-207ENST00000474006 COPRSQ9NQ92 184 aa9.41□□□□□ -0.9
CCDC93-207ENST00000474006 SRGNP10124 158 aa9.4□□□□□ -0.9
CCDC93-207ENST00000474006 NPR1P16066 1061 aa9.4□□□□□ -0.9
CCDC93-207ENST00000474006 CHRNA5P30532 468 aa9.4□□□□□ -0.9
CCDC93-207ENST00000474006 RPS8P62241 208 aaKnown RBP9.4□□□□□ -0.9
CCDC93-207ENST00000474006 G3BP1Q13283 466 aaKnown RBP eCLIP9.4□□□□□ -0.9
CCDC93-207ENST00000474006 TAF7LQ5H9L4 462 aa9.4□□□□□ -0.9
CCDC93-207ENST00000474006 LDHAL6AQ6ZMR3 332 aa9.4□□□□□ -0.9
CCDC93-207ENST00000474006 ZNF622Q969S3 477 aaKnown RBP eCLIP9.4□□□□□ -0.91e-7■■■□□ 16.2
CCDC93-207ENST00000474006 PUS3Q9BZE2 481 aaKnown RBP9.4□□□□□ -0.9
CCDC93-207ENST00000474006 SIL1Q9H173 461 aa9.4□□□□□ -0.9
CCDC93-207ENST00000474006 PPP1R1BQ9UD71 204 aaPredicted RBP9.4□□□□□ -0.9
CCDC93-207ENST00000474006 NOP58Q9Y2X3 529 aaKnown RBP9.4□□□□□ -0.9
CCDC93-207ENST00000474006 ARFGEF2Q9Y6D5 1785 aa9.4□□□□□ -0.91
CCDC93-207ENST00000474006 A0A0G2JLW4 131 aa9.39□□□□□ -0.91
CCDC93-207ENST00000474006 BBOX1O75936 387 aa9.39□□□□□ -0.91
CCDC93-207ENST00000474006 ALDH1B1P30837 517 aa9.39□□□□□ -0.91
CCDC93-207ENST00000474006 IGHMBP2P38935 993 aaKnown RBP9.39□□□□□ -0.91
CCDC93-207ENST00000474006 TGFB2P61812 414 aa9.39□□□□□ -0.91
CCDC93-207ENST00000474006 LRRC24Q50LG9 513 aa9.39□□□□□ -0.91
CCDC93-207ENST00000474006 RBM46Q8TBY0 533 aaKnown RBP9.39□□□□□ -0.91
CCDC93-207ENST00000474006 CELF1Q92879 486 aaKnown RBP9.39□□□□□ -0.91
CCDC93-207ENST00000474006 GCC1Q96CN9 775 aa9.39□□□□□ -0.91
CCDC93-207ENST00000474006 MASTLQ96GX5 879 aa9.39□□□□□ -0.91
CCDC93-207ENST00000474006 CRAMP1Q96RY5 1269 aa9.39□□□□□ -0.91
CCDC93-207ENST00000474006 CDC5LQ99459 802 aaKnown RBP9.39□□□□□ -0.91
CCDC93-207ENST00000474006 PDZRN3Q9UPQ7 1066 aa9.39□□□□□ -0.91
CCDC93-207ENST00000474006 EXOC6BQ9Y2D4 811 aa9.39□□□□□ -0.91
CCDC93-207ENST00000474006 RIPOR2Q9Y4F9 1068 aa9.39□□□□□ -0.91
CCDC93-207ENST00000474006 CD2APQ9Y5K6 639 aa9.39□□□□□ -0.91
CCDC93-207ENST00000474006 RTL9Q8NET4 1388 aa9.38□□□□□ -0.91
CCDC93-207ENST00000474006 PPP1R3GB7ZBB8 358 aa9.38□□□□□ -0.91
CCDC93-207ENST00000474006 EYA2O00167 538 aa9.38□□□□□ -0.91
CCDC93-207ENST00000474006 APBB1O00213 710 aa9.38□□□□□ -0.91
CCDC93-207ENST00000474006 RAB11FIP3O75154 756 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms