RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 NYXQ9GZU5 481 aa21.63■■□□□ 1.05
VARS2-206ENST00000473916 MAST3O60307 1309 aa21.63■■□□□ 1.05
VARS2-206ENST00000473916 M0R2C6 588 aa21.63■■□□□ 1.05
VARS2-206ENST00000473916 RNF113AO15541 343 aaKnown RBP21.63■■□□□ 1.05
VARS2-206ENST00000473916 NFIXQ14938 502 aa21.63■■□□□ 1.05
VARS2-206ENST00000473916 CDC5LQ99459 802 aaKnown RBP21.62■■□□□ 1.05
VARS2-206ENST00000473916 CYP2E1P05181 493 aaPredicted RBP21.62■■□□□ 1.05
VARS2-206ENST00000473916 SLC5A1P13866 664 aa21.62■■□□□ 1.05
VARS2-206ENST00000473916 ANKRD18AQ8IVF6 992 aa21.62■■□□□ 1.05
VARS2-206ENST00000473916 OSBP2Q969R2 916 aa21.62■■□□□ 1.05
VARS2-206ENST00000473916 ARID4AP29374 1257 aaPredicted RBP21.61■■□□□ 1.05
VARS2-206ENST00000473916 TXNRD1Q16881 649 aa21.61■■□□□ 1.05
VARS2-206ENST00000473916 SLC27A3Q5K4L6 730 aa21.61■■□□□ 1.05
VARS2-206ENST00000473916 PIH1D3Q9NQM4 214 aaKnown RBP21.61■■□□□ 1.05
VARS2-206ENST00000473916 HELLSQ9NRZ9 838 aa21.61■■□□□ 1.05
VARS2-206ENST00000473916 AK2P54819 239 aa21.6■■□□□ 1.05
VARS2-206ENST00000473916 TPTE2Q6XPS3 522 aa21.6■■□□□ 1.05
VARS2-206ENST00000473916 SLC51AQ86UW1 340 aa21.6■■□□□ 1.05
VARS2-206ENST00000473916 SSFA2P28290 1259 aa21.6■■□□□ 1.05
VARS2-206ENST00000473916 ZNF512BQ96KM6 892 aaPredicted RBP21.6■■□□□ 1.05
VARS2-206ENST00000473916 RPAP1Q9BWH6 1393 aaPredicted RBP21.6■■□□□ 1.05
VARS2-206ENST00000473916 A0A0G2JLW4 131 aa21.59■■□□□ 1.05
VARS2-206ENST00000473916 ZKSCAN1P17029 563 aaPredicted RBP21.59■■□□□ 1.05
VARS2-206ENST00000473916 BCAMP50895 628 aa21.59■■□□□ 1.05
VARS2-206ENST00000473916 PKP1Q13835 747 aa21.59■■□□□ 1.05
VARS2-206ENST00000473916 NLRP3Q96P20 1036 aa21.59■■□□□ 1.05
VARS2-206ENST00000473916 HMG20BQ9P0W2 317 aa21.59■■□□□ 1.05
VARS2-206ENST00000473916 CARMIL3Q8ND23 1372 aa21.58■■□□□ 1.05
VARS2-206ENST00000473916 GYS1P13807 737 aa21.58■■□□□ 1.05
VARS2-206ENST00000473916 MCM2P49736 904 aa21.58■■□□□ 1.05
VARS2-206ENST00000473916 RASGRF1Q13972 1273 aa21.58■■□□□ 1.05
VARS2-206ENST00000473916 RUFY3Q7L099 469 aa21.58■■□□□ 1.05
VARS2-206ENST00000473916 ZSWIM6Q9HCJ5 1215 aa21.58■■□□□ 1.05
VARS2-206ENST00000473916 CIZ1Q9ULV3 898 aaPredicted RBP21.58■■□□□ 1.05
VARS2-206ENST00000473916 LAMA4Q16363 1823 aa21.58■■□□□ 1.05
VARS2-206ENST00000473916 NPHP1O15259 732 aa21.58■■□□□ 1.04
VARS2-206ENST00000473916 ADRA2BP18089 450 aa21.58■■□□□ 1.04
VARS2-206ENST00000473916 TCEANC2Q96MN5 208 aa21.58■■□□□ 1.04
VARS2-206ENST00000473916 BSDC1Q9NW68 430 aaPredicted RBP21.58■■□□□ 1.04
VARS2-206ENST00000473916 DOCK2Q92608 1830 aa21.57■■□□□ 1.04
VARS2-206ENST00000473916 RAB3GAP1Q15042 981 aa21.57■■□□□ 1.04
VARS2-206ENST00000473916 WASHC4Q2M389 1173 aa21.57■■□□□ 1.04
VARS2-206ENST00000473916 TNPO1Q92973 898 aaKnown RBP21.57■■□□□ 1.04
VARS2-206ENST00000473916 PUS7LQ9H0K6 701 aaKnown RBP21.57■■□□□ 1.04
VARS2-206ENST00000473916 MINPP1Q9UNW1 487 aa21.57■■□□□ 1.04
VARS2-206ENST00000473916 LARGE1O95461 756 aa21.56■■□□□ 1.04
VARS2-206ENST00000473916 TM4SF1P30408 202 aa21.56■■□□□ 1.04
VARS2-206ENST00000473916 CUL4AQ13619 759 aa21.56■■□□□ 1.04
VARS2-206ENST00000473916 TM6SF1Q9BZW5 370 aa21.56■■□□□ 1.04
VARS2-206ENST00000473916 FOXP2O15409 715 aa21.56■■□□□ 1.04
VARS2-206ENST00000473916 CYP21A2P08686 494 aa21.56■■□□□ 1.04
VARS2-206ENST00000473916 UQCRFS1P1P0C7P4 283 aa21.56■■□□□ 1.04
VARS2-206ENST00000473916 HSPD1P10809 573 aaKnown RBP21.56■■□□□ 1.04
VARS2-206ENST00000473916 PDRG1Q9NUG6 133 aa21.56■■□□□ 1.04
VARS2-206ENST00000473916 IQSEC3Q9UPP2 1182 aaPredicted RBP21.56■■□□□ 1.04
VARS2-206ENST00000473916 CYP46A1Q9Y6A2 500 aa21.56■■□□□ 1.04
VARS2-206ENST00000473916 IDH1O75874 414 aaKnown RBP21.55■■□□□ 1.04
VARS2-206ENST00000473916 ZNF827Q17R98 1081 aa21.55■■□□□ 1.04
VARS2-206ENST00000473916 RNF20Q5VTR2 975 aa21.55■■□□□ 1.04
VARS2-206ENST00000473916 SPATA5Q8NB90 893 aa21.55■■□□□ 1.04
VARS2-206ENST00000473916 RGS17Q9UGC6 210 aaPredicted RBP21.55■■□□□ 1.04
VARS2-206ENST00000473916 U3KPZ7 1027 aaPredicted RBP21.55■■□□□ 1.04
VARS2-206ENST00000473916 RXRBP28702 533 aa21.55■■□□□ 1.04
VARS2-206ENST00000473916 CNBD1Q8NA66 436 aa21.55■■□□□ 1.04
VARS2-206ENST00000473916 WWC3Q9ULE0 1092 aa21.55■■□□□ 1.04
VARS2-206ENST00000473916 APBA3O96018 575 aa21.54■■□□□ 1.04
VARS2-206ENST00000473916 GYG1P46976 350 aa21.54■■□□□ 1.04
VARS2-206ENST00000473916 RPS8P62241 208 aaKnown RBP21.54■■□□□ 1.04
VARS2-206ENST00000473916 TICAM2Q86XR7 235 aa21.54■■□□□ 1.04
VARS2-206ENST00000473916 DTNBO60941 627 aa21.53■■□□□ 1.04
VARS2-206ENST00000473916 KLRK1P26718 216 aa21.53■■□□□ 1.04
VARS2-206ENST00000473916 SLC9C2Q5TAH2 1124 aa21.53■■□□□ 1.04
VARS2-206ENST00000473916 PRR5LQ6MZQ0 368 aa21.53■■□□□ 1.04
VARS2-206ENST00000473916 STOX1Q6ZVD7 989 aa21.53■■□□□ 1.04
VARS2-206ENST00000473916 APPBP2Q92624 585 aa21.53■■□□□ 1.04
VARS2-206ENST00000473916 TNS1Q9HBL0 1735 aaKnown RBP21.53■■□□□ 1.04
VARS2-206ENST00000473916 ZFYP08048 801 aaPredicted RBP21.53■■□□□ 1.04
VARS2-206ENST00000473916 ADD2P35612 726 aa21.53■■□□□ 1.04
VARS2-206ENST00000473916 TSGA10IPQ3SY00 556 aa21.53■■□□□ 1.04
VARS2-206ENST00000473916 TTLL5Q6EMB2 1281 aa21.53■■□□□ 1.04
VARS2-206ENST00000473916 DSCC1Q9BVC3 393 aa21.53■■□□□ 1.04
VARS2-206ENST00000473916 COL1A1P02452 1464 aaPredicted RBP21.52■■□□□ 1.04
VARS2-206ENST00000473916 MCM4P33991 863 aa21.51■■□□□ 1.03
VARS2-206ENST00000473916 DDR1Q08345 913 aa21.51■■□□□ 1.03
VARS2-206ENST00000473916 TTF1Q15361 905 aaPredicted RBP21.51■■□□□ 1.03
VARS2-206ENST00000473916 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.51■■□□□ 1.034e-7■■■■□ 23.7
VARS2-206ENST00000473916 LIMCH1Q9UPQ0 1083 aa21.51■■□□□ 1.03
VARS2-206ENST00000473916 ZNF532Q9HCE3 1301 aa21.51■■□□□ 1.03
VARS2-206ENST00000473916 PDE6AP16499 860 aa21.51■■□□□ 1.03
VARS2-206ENST00000473916 BLOC1S2Q6QNY1 142 aa21.51■■□□□ 1.03
VARS2-206ENST00000473916 GPAA1O43292 621 aa21.5■■□□□ 1.03
VARS2-206ENST00000473916 RPS6KB1P23443 525 aa21.5■■□□□ 1.03
VARS2-206ENST00000473916 LRRFIP1Q32MZ4 808 aaKnown RBP21.5■■□□□ 1.03
VARS2-206ENST00000473916 POTEAQ6S8J7 498 aa21.5■■□□□ 1.03
VARS2-206ENST00000473916 CWC22Q9HCG8 908 aaKnown RBP21.5■■□□□ 1.03
VARS2-206ENST00000473916 ZDHHC9Q9Y397 364 aa21.5■■□□□ 1.03
VARS2-206ENST00000473916 TCRBV5S4A2TA0A5A2 114 aa21.5■■□□□ 1.03
VARS2-206ENST00000473916 PSMA5P28066 241 aa21.5■■□□□ 1.03
VARS2-206ENST00000473916 TFCP2L1Q9NZI6 479 aa21.5■■□□□ 1.03
VARS2-206ENST00000473916 ZNF804BA4D1E1 1349 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms