RNA–Protein interactions for RNA: ENST00000473843.1

MACF1-215, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-215ENST00000473843 CC2D1BQ5T0F9 858 aaKnown RBP14.74□□□□□ -0.05
MACF1-215ENST00000473843 LRP10Q7Z4F1 713 aa14.74□□□□□ -0.05
MACF1-215ENST00000473843 A0A1W2PPC1 479 aa14.73□□□□□ -0.05
MACF1-215ENST00000473843 CAP1Q01518 475 aa14.73□□□□□ -0.05
MACF1-215ENST00000473843 PRKG1Q13976 671 aa14.73□□□□□ -0.05
MACF1-215ENST00000473843 OTUD7BQ6GQQ9 843 aa14.73□□□□□ -0.05
MACF1-215ENST00000473843 SPDYE1Q8NFV5 336 aaPredicted RBP14.73□□□□□ -0.05
MACF1-215ENST00000473843 DPF3Q92784 378 aa14.73□□□□□ -0.05
MACF1-215ENST00000473843 PODXL2Q9NZ53 605 aa14.73□□□□□ -0.05
MACF1-215ENST00000473843 PTCH2Q9Y6C5 1203 aa14.73□□□□□ -0.05
MACF1-215ENST00000473843 ARHGEF6Q15052 776 aa14.72□□□□□ -0.05
MACF1-215ENST00000473843 SF3B3Q15393 1217 aaKnown RBP14.72□□□□□ -0.05
MACF1-215ENST00000473843 SLC10A4Q96EP9 437 aa14.72□□□□□ -0.05
MACF1-215ENST00000473843 WNK4Q96J92 1243 aa14.72□□□□□ -0.05
MACF1-215ENST00000473843 ANGEL1Q9UNK9 670 aaKnown RBP14.72□□□□□ -0.05
MACF1-215ENST00000473843 TIMELESSQ9UNS1 1208 aa14.72□□□□□ -0.05
MACF1-215ENST00000473843 UFL1O94874 794 aa14.71□□□□□ -0.05
MACF1-215ENST00000473843 THUMPD2Q9BTF0 503 aaKnown RBP14.71□□□□□ -0.05
MACF1-215ENST00000473843 ECM29Q5VYK3 1845 aa14.71□□□□□ -0.06
MACF1-215ENST00000473843 COL1A1P02452 1464 aaPredicted RBP14.7□□□□□ -0.06
MACF1-215ENST00000473843 USP17L3A6NCW0 530 aa14.7□□□□□ -0.06
MACF1-215ENST00000473843 USP17L4A6NCW7 530 aa14.7□□□□□ -0.06
MACF1-215ENST00000473843 SOX1O00570 391 aaPredicted RBP14.7□□□□□ -0.06
MACF1-215ENST00000473843 WNT10BO00744 389 aa14.7□□□□□ -0.06
MACF1-215ENST00000473843 PDIA6Q15084 440 aa14.7□□□□□ -0.06
MACF1-215ENST00000473843 USP17L1Q7RTZ2 530 aa14.7□□□□□ -0.06
MACF1-215ENST00000473843 APOBEC3FQ8IUX4 373 aaKnown RBP14.7□□□□□ -0.06
MACF1-215ENST00000473843 GGA1Q9UJY5 639 aa14.7□□□□□ -0.06
MACF1-215ENST00000473843 PER1O15534 1290 aaPredicted RBP14.69□□□□□ -0.06
MACF1-215ENST00000473843 MAP3K11Q16584 847 aa14.69□□□□□ -0.06
MACF1-215ENST00000473843 OGFOD1Q8N543 542 aa14.69□□□□□ -0.06
MACF1-215ENST00000473843 LRCH3Q96II8 777 aa14.69□□□□□ -0.06
MACF1-215ENST00000473843 HTATIP2Q9BUP3 242 aa14.69□□□□□ -0.06
MACF1-215ENST00000473843 COL25A1Q9BXS0 654 aaPredicted RBP14.69□□□□□ -0.06
MACF1-215ENST00000473843 ZSWIM8A7E2V4 1837 aa14.69□□□□□ -0.06
MACF1-215ENST00000473843 OTOFQ9HC10 1997 aa14.68□□□□□ -0.06
MACF1-215ENST00000473843 WTIPA6NIX2 430 aaPredicted RBP14.68□□□□□ -0.06
MACF1-215ENST00000473843 MYCP01106 439 aaPredicted RBP14.68□□□□□ -0.06
MACF1-215ENST00000473843 RPS8P62241 208 aaKnown RBP14.68□□□□□ -0.06
MACF1-215ENST00000473843 SHISA4Q96DD7 197 aa14.68□□□□□ -0.06
MACF1-215ENST00000473843 CLMNQ96JQ2 1002 aa14.68□□□□□ -0.06
MACF1-215ENST00000473843 CFAP53Q96M91 514 aa14.68□□□□□ -0.06
MACF1-215ENST00000473843 ANKIB1Q9P2G1 1089 aa14.68□□□□□ -0.06
MACF1-215ENST00000473843 NUDCQ9Y266 331 aa14.68□□□□□ -0.06
MACF1-215ENST00000473843 NR2E3Q9Y5X4 410 aa14.68□□□□□ -0.06
MACF1-215ENST00000473843 UNCXA6NJT0 531 aa14.67□□□□□ -0.06
MACF1-215ENST00000473843 U2AF1L5P0DN76 240 aaPredicted RBP14.67□□□□□ -0.06
MACF1-215ENST00000473843 U2AF1Q01081 240 aaKnown RBP eCLIP14.67□□□□□ -0.06
MACF1-215ENST00000473843 PROSER3Q2NL68 480 aa14.67□□□□□ -0.06
MACF1-215ENST00000473843 PODNQ7Z5L7 613 aa14.67□□□□□ -0.06
MACF1-215ENST00000473843 TTC28Q96AY4 2481 aa14.67□□□□□ -0.06
MACF1-215ENST00000473843 SSC5DA1L4H1 1573 aa14.66□□□□□ -0.06
MACF1-215ENST00000473843 SASH1O94885 1247 aa14.66□□□□□ -0.06
MACF1-215ENST00000473843 ANXA1P04083 346 aa14.66□□□□□ -0.06
MACF1-215ENST00000473843 MMP14P50281 582 aa14.66□□□□□ -0.06
MACF1-215ENST00000473843 GPR153Q6NV75 609 aa14.66□□□□□ -0.06
MACF1-215ENST00000473843 ANKRD13DQ6ZTN6 518 aa14.66□□□□□ -0.06
MACF1-215ENST00000473843 SH3TC2Q8TF17 1288 aa14.66□□□□□ -0.06
MACF1-215ENST00000473843 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.66□□□□□ -0.06
MACF1-215ENST00000473843 FZD1Q9UP38 647 aa14.66□□□□□ -0.06
MACF1-215ENST00000473843 MYO3BQ8WXR4 1341 aa14.66□□□□□ -0.06
MACF1-215ENST00000473843 TESPA1A2RU30 521 aaPredicted RBP14.65□□□□□ -0.06
MACF1-215ENST00000473843 ZBTB7BO15156 539 aaPredicted RBP14.65□□□□□ -0.06
MACF1-215ENST00000473843 COPS6Q7L5N1 327 aa14.65□□□□□ -0.06
MACF1-215ENST00000473843 NKX2-3Q8TAU0 364 aa14.65□□□□□ -0.06
MACF1-215ENST00000473843 PTPN18Q99952 460 aa14.65□□□□□ -0.06
MACF1-215ENST00000473843 STXBP5LQ9Y2K9 1186 aa14.65□□□□□ -0.06
MACF1-215ENST00000473843 UNC80Q8N2C7 3258 aa14.65□□□□□ -0.06
MACF1-215ENST00000473843 PPP1R12BO60237 982 aaPredicted RBP14.64□□□□□ -0.07
MACF1-215ENST00000473843 EIF2S2P20042 333 aaKnown RBP14.64□□□□□ -0.07
MACF1-215ENST00000473843 AIMP1Q12904 312 aaKnown RBP14.64□□□□□ -0.07
MACF1-215ENST00000473843 UBE2Q1Q7Z7E8 422 aa14.64□□□□□ -0.07
MACF1-215ENST00000473843 XAGE3Q8WTP9 111 aa14.64□□□□□ -0.07
MACF1-215ENST00000473843 FAM89AQ96GI7 184 aa14.64□□□□□ -0.07
MACF1-215ENST00000473843 XDHP47989 1333 aa14.64□□□□□ -0.07
MACF1-215ENST00000473843 GJA5P36382 358 aa14.63□□□□□ -0.07
MACF1-215ENST00000473843 DACT2Q5SW24 774 aa14.63□□□□□ -0.07
MACF1-215ENST00000473843 ZNF428Q96B54 188 aa14.63□□□□□ -0.07
MACF1-215ENST00000473843 TAF1CQ15572 869 aaPredicted RBP14.62□□□□□ -0.07
MACF1-215ENST00000473843 POTEHQ6S545 545 aa14.62□□□□□ -0.07
MACF1-215ENST00000473843 DEFB123Q8N688 67 aa14.62□□□□□ -0.07
MACF1-215ENST00000473843 MXD3Q9BW11 206 aa14.62□□□□□ -0.07
MACF1-215ENST00000473843 DEFB129Q9H1M3 183 aa14.62□□□□□ -0.07
MACF1-215ENST00000473843 ZFYVE28Q9HCC9 887 aa14.62□□□□□ -0.07
MACF1-215ENST00000473843 PPP2R3BQ9Y5P8 575 aa14.62□□□□□ -0.07
MACF1-215ENST00000473843 ALPK3Q96L96 1907 aa14.62□□□□□ -0.07
MACF1-215ENST00000473843 GNRH1P01148 92 aa14.61□□□□□ -0.07
MACF1-215ENST00000473843 ATP2B4P23634 1241 aa14.61□□□□□ -0.07
MACF1-215ENST00000473843 STRIP1Q5VSL9 837 aa14.61□□□□□ -0.07
MACF1-215ENST00000473843 ZBED3Q96IU2 234 aaPredicted RBP14.61□□□□□ -0.07
MACF1-215ENST00000473843 MED23Q9ULK4 1368 aa14.6□□□□□ -0.07
MACF1-215ENST00000473843 SPEF2Q9C093 1822 aa14.6□□□□□ -0.07
MACF1-215ENST00000473843 IRS4O14654 1257 aaPredicted RBP14.6□□□□□ -0.07
MACF1-215ENST00000473843 GJA8P48165 433 aa14.6□□□□□ -0.07
MACF1-215ENST00000473843 IREB2P48200 963 aaKnown RBP14.6□□□□□ -0.07
MACF1-215ENST00000473843 PRMT2P55345 433 aa14.6□□□□□ -0.07
MACF1-215ENST00000473843 KIF22Q14807 665 aa14.6□□□□□ -0.07
MACF1-215ENST00000473843 MTFR1Q15390 333 aa14.6□□□□□ -0.07
MACF1-215ENST00000473843 ISCA1Q9BUE6 129 aa14.6□□□□□ -0.07
MACF1-215ENST00000473843 SEC31BQ9NQW1 1179 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms