RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 PTCH2Q9Y6C5 1203 aa13.9□□□□□ -0.18
SSBP1-209ENST00000473783 UNCXA6NJT0 531 aa13.89□□□□□ -0.19
SSBP1-209ENST00000473783 U2AF1L5P0DN76 240 aaPredicted RBP13.89□□□□□ -0.19
SSBP1-209ENST00000473783 U2AF1Q01081 240 aaKnown RBP eCLIP13.89□□□□□ -0.19
SSBP1-209ENST00000473783 CAP1Q01518 475 aa13.89□□□□□ -0.19
SSBP1-209ENST00000473783 MAP3K11Q16584 847 aa13.89□□□□□ -0.19
SSBP1-209ENST00000473783 PODNQ7Z5L7 613 aa13.89□□□□□ -0.19
SSBP1-209ENST00000473783 ANKIB1Q9P2G1 1089 aa13.89□□□□□ -0.19
SSBP1-209ENST00000473783 MMP14P50281 582 aa13.88□□□□□ -0.19
SSBP1-209ENST00000473783 MAPK8IP2Q13387 824 aaPredicted RBP13.88□□□□□ -0.19
SSBP1-209ENST00000473783 MYO3BQ8WXR4 1341 aa13.88□□□□□ -0.19
SSBP1-209ENST00000473783 ECM29Q5VYK3 1845 aa13.87□□□□□ -0.19
SSBP1-209ENST00000473783 PROSER3Q2NL68 480 aa13.87□□□□□ -0.19
SSBP1-209ENST00000473783 COPS6Q7L5N1 327 aa13.87□□□□□ -0.19
SSBP1-209ENST00000473783 HTATIP2Q9BUP3 242 aa13.87□□□□□ -0.19
SSBP1-209ENST00000473783 NR2E3Q9Y5X4 410 aa13.87□□□□□ -0.19
SSBP1-209ENST00000473783 UNC80Q8N2C7 3258 aa13.87□□□□□ -0.19
SSBP1-209ENST00000473783 ANXA1P04083 346 aa13.86□□□□□ -0.19
SSBP1-209ENST00000473783 TESPA1A2RU30 521 aaPredicted RBP13.85□□□□□ -0.19
SSBP1-209ENST00000473783 SOX1O00570 391 aaPredicted RBP13.85□□□□□ -0.19
SSBP1-209ENST00000473783 PPP1R12BO60237 982 aaPredicted RBP13.85□□□□□ -0.19
SSBP1-209ENST00000473783 EIF2S2P20042 333 aaKnown RBP13.85□□□□□ -0.19
SSBP1-209ENST00000473783 NKX2-3Q8TAU0 364 aa13.85□□□□□ -0.19
SSBP1-209ENST00000473783 XAGE3Q8WTP9 111 aa13.85□□□□□ -0.19
SSBP1-209ENST00000473783 SHISA4Q96DD7 197 aa13.85□□□□□ -0.19
SSBP1-209ENST00000473783 FAM89AQ96GI7 184 aa13.85□□□□□ -0.19
SSBP1-209ENST00000473783 CLMNQ96JQ2 1002 aa13.85□□□□□ -0.19
SSBP1-209ENST00000473783 XDHP47989 1333 aa13.85□□□□□ -0.19
SSBP1-209ENST00000473783 WTIPA6NIX2 430 aaPredicted RBP13.84□□□□□ -0.19
SSBP1-209ENST00000473783 SASH1O94885 1247 aa13.84□□□□□ -0.19
SSBP1-209ENST00000473783 MYCP01106 439 aaPredicted RBP13.84□□□□□ -0.19
SSBP1-209ENST00000473783 AIMP1Q12904 312 aaKnown RBP13.84□□□□□ -0.19
SSBP1-209ENST00000473783 DACT2Q5SW24 774 aa13.84□□□□□ -0.19
SSBP1-209ENST00000473783 GPR153Q6NV75 609 aa13.84□□□□□ -0.19
SSBP1-209ENST00000473783 ANKRD13DQ6ZTN6 518 aa13.84□□□□□ -0.19
SSBP1-209ENST00000473783 LRCH3Q96II8 777 aa13.84□□□□□ -0.19
SSBP1-209ENST00000473783 PTPN18Q99952 460 aa13.84□□□□□ -0.19
SSBP1-209ENST00000473783 COL25A1Q9BXS0 654 aaPredicted RBP13.84□□□□□ -0.19
SSBP1-209ENST00000473783 FZD1Q9UP38 647 aa13.84□□□□□ -0.19
SSBP1-209ENST00000473783 SSC5DA1L4H1 1573 aa13.83□□□□□ -0.19
SSBP1-209ENST00000473783 OTOFQ9HC10 1997 aa13.83□□□□□ -0.19
SSBP1-209ENST00000473783 SH3TC2Q8TF17 1288 aa13.83□□□□□ -0.2
SSBP1-209ENST00000473783 PPP2R3BQ9Y5P8 575 aa13.83□□□□□ -0.2
SSBP1-209ENST00000473783 ZSWIM8A7E2V4 1837 aa13.83□□□□□ -0.2
SSBP1-209ENST00000473783 ZBTB7BO15156 539 aaPredicted RBP13.82□□□□□ -0.2
SSBP1-209ENST00000473783 NEFMP07197 916 aa13.82□□□□□ -0.2
SSBP1-209ENST00000473783 ATP2B4P23634 1241 aa13.82□□□□□ -0.2
SSBP1-209ENST00000473783 GJA5P36382 358 aa13.82□□□□□ -0.2
SSBP1-209ENST00000473783 STRIP1Q5VSL9 837 aa13.82□□□□□ -0.2
SSBP1-209ENST00000473783 UBE2Q1Q7Z7E8 422 aa13.82□□□□□ -0.2
SSBP1-209ENST00000473783 ISCA1Q9BUE6 129 aa13.82□□□□□ -0.2
SSBP1-209ENST00000473783 DEFB129Q9H1M3 183 aa13.82□□□□□ -0.2
SSBP1-209ENST00000473783 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.82□□□□□ -0.2
SSBP1-209ENST00000473783 STXBP5LQ9Y2K9 1186 aa13.82□□□□□ -0.2
SSBP1-209ENST00000473783 MED23Q9ULK4 1368 aa13.82□□□□□ -0.2
SSBP1-209ENST00000473783 IRS4O14654 1257 aaPredicted RBP13.81□□□□□ -0.2
SSBP1-209ENST00000473783 GNRH1P01148 92 aa13.81□□□□□ -0.2
SSBP1-209ENST00000473783 PRMT2P55345 433 aa13.81□□□□□ -0.2
SSBP1-209ENST00000473783 TAF1CQ15572 869 aaPredicted RBP13.81□□□□□ -0.2
SSBP1-209ENST00000473783 ZNF428Q96B54 188 aa13.81□□□□□ -0.2
SSBP1-209ENST00000473783 ZBED3Q96IU2 234 aaPredicted RBP13.81□□□□□ -0.2
SSBP1-209ENST00000473783 ZFYVE28Q9HCC9 887 aa13.81□□□□□ -0.2
SSBP1-209ENST00000473783 SEC31BQ9NQW1 1179 aa13.81□□□□□ -0.2
SSBP1-209ENST00000473783 TSPYL4Q9UJ04 414 aa13.81□□□□□ -0.2
SSBP1-209ENST00000473783 HSP90B1P14625 803 aaKnown RBP13.8□□□□□ -0.2
SSBP1-209ENST00000473783 IREB2P48200 963 aaKnown RBP13.8□□□□□ -0.2
SSBP1-209ENST00000473783 CNGB1Q14028 1251 aaPredicted RBP13.8□□□□□ -0.2
SSBP1-209ENST00000473783 SUPT20HL1Q3ZLR7 823 aa13.8□□□□□ -0.2
SSBP1-209ENST00000473783 ANKRD13AQ8IZ07 590 aa13.8□□□□□ -0.2
SSBP1-209ENST00000473783 PLBD2Q8NHP8 589 aa13.8□□□□□ -0.2
SSBP1-209ENST00000473783 MXD3Q9BW11 206 aa13.8□□□□□ -0.2
SSBP1-209ENST00000473783 GJA8P48165 433 aa13.79□□□□□ -0.2
SSBP1-209ENST00000473783 KIF22Q14807 665 aa13.79□□□□□ -0.2
SSBP1-209ENST00000473783 RTL5Q5HYW3 569 aaPredicted RBP13.79□□□□□ -0.2
SSBP1-209ENST00000473783 DEFB123Q8N688 67 aa13.79□□□□□ -0.2
SSBP1-209ENST00000473783 WDHD1O75717 1129 aaPredicted RBP13.78□□□□□ -0.2
SSBP1-209ENST00000473783 GJB1P08034 283 aa13.78□□□□□ -0.2
SSBP1-209ENST00000473783 TRIM28Q13263 835 aaKnown RBP13.78□□□□□ -0.2
SSBP1-209ENST00000473783 MTFR1Q15390 333 aa13.78□□□□□ -0.2
SSBP1-209ENST00000473783 CCDC152Q4G0S7 254 aa13.78□□□□□ -0.2
SSBP1-209ENST00000473783 FBXW7Q969H0 707 aa13.78□□□□□ -0.2
SSBP1-209ENST00000473783 MS4A4AQ96JQ5 239 aa13.78□□□□□ -0.2
SSBP1-209ENST00000473783 COA1Q9GZY4 146 aa13.78□□□□□ -0.2
SSBP1-209ENST00000473783 ZNF804BA4D1E1 1349 aa13.77□□□□□ -0.21
SSBP1-209ENST00000473783 ATP5J2-PTCD1G3V325 749 aa13.77□□□□□ -0.21
SSBP1-209ENST00000473783 LACTBP83111 547 aaPredicted RBP13.77□□□□□ -0.21
SSBP1-209ENST00000473783 NFE2L2Q16236 605 aa13.77□□□□□ -0.21
SSBP1-209ENST00000473783 KIAA0825Q8IV33 1275 aa13.77□□□□□ -0.21
SSBP1-209ENST00000473783 BRI3BPQ8WY22 251 aa13.77□□□□□ -0.21
SSBP1-209ENST00000473783 TTC28Q96AY4 2481 aa13.77□□□□□ -0.21
SSBP1-209ENST00000473783 OPTNQ96CV9 577 aa13.77□□□□□ -0.21
SSBP1-209ENST00000473783 SPEF2Q9C093 1822 aa13.77□□□□□ -0.21
SSBP1-209ENST00000473783 CLSPNQ9HAW4 1339 aa13.76□□□□□ -0.21
SSBP1-209ENST00000473783 EVI5O60447 810 aa13.76□□□□□ -0.21
SSBP1-209ENST00000473783 USP2O75604 605 aaPredicted RBP13.76□□□□□ -0.21
SSBP1-209ENST00000473783 DLGAP5Q15398 846 aa13.76□□□□□ -0.21
SSBP1-209ENST00000473783 ANKRD18AQ8IVF6 992 aa13.76□□□□□ -0.21
SSBP1-209ENST00000473783 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.76□□□□□ -0.21
SSBP1-209ENST00000473783 ARHGAP39Q9C0H5 1083 aa13.76□□□□□ -0.21
SSBP1-209ENST00000473783 BABAM1Q9NWV8 329 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms