RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 KLRG2A4D1S0 409 aaPredicted RBP17.91■□□□□ 0.46
LMNA-213ENST00000473598 FGFR2P21802 821 aa17.91■□□□□ 0.46
LMNA-213ENST00000473598 SLC4A3P48751 1232 aa17.91■□□□□ 0.46
LMNA-213ENST00000473598 PUM3Q15397 648 aaKnown RBP17.91■□□□□ 0.46
LMNA-213ENST00000473598 HELBQ8NG08 1087 aaPredicted RBP17.91■□□□□ 0.46
LMNA-213ENST00000473598 BOLA2Q9H3K6 86 aa17.91■□□□□ 0.46
LMNA-213ENST00000473598 DPEP1P16444 411 aa17.9■□□□□ 0.46
LMNA-213ENST00000473598 ADORA1P30542 326 aa17.9■□□□□ 0.46
LMNA-213ENST00000473598 CASC1Q6TDU7 716 aa17.9■□□□□ 0.46
LMNA-213ENST00000473598 BRIP1Q9BX63 1249 aa17.9■□□□□ 0.46
LMNA-213ENST00000473598 TAF5LO75529 589 aa17.89■□□□□ 0.46
LMNA-213ENST00000473598 LPIN2Q92539 896 aa17.89■□□□□ 0.46
LMNA-213ENST00000473598 RPGRQ92834 1020 aaKnown RBP17.89■□□□□ 0.46
LMNA-213ENST00000473598 MINPP1Q9UNW1 487 aa17.89■□□□□ 0.46
LMNA-213ENST00000473598 COL11A2P13942 1736 aaPredicted RBP17.89■□□□□ 0.45
LMNA-213ENST00000473598 KCNA3P22001 575 aa17.89■□□□□ 0.45
LMNA-213ENST00000473598 GRAPQ13588 217 aa17.89■□□□□ 0.45
LMNA-213ENST00000473598 CCDC158Q5M9N0 1113 aa17.89■□□□□ 0.45
LMNA-213ENST00000473598 GRAPLQ8TC17 118 aaPredicted RBP17.89■□□□□ 0.45
LMNA-213ENST00000473598 EVI5LQ96CN4 794 aa17.89■□□□□ 0.45
LMNA-213ENST00000473598 GORABQ5T7V8 394 aa17.88■□□□□ 0.45
LMNA-213ENST00000473598 TGFB2P61812 414 aa17.88■□□□□ 0.45
LMNA-213ENST00000473598 C2CD5Q86YS7 1000 aa17.88■□□□□ 0.45
LMNA-213ENST00000473598 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.88■□□□□ 0.45
LMNA-213ENST00000473598 RBM17Q96I25 401 aaKnown RBP17.88■□□□□ 0.45
LMNA-213ENST00000473598 HAUS7Q99871 368 aa17.88■□□□□ 0.45
LMNA-213ENST00000473598 AKAP11Q9UKA4 1901 aa17.87■□□□□ 0.45
LMNA-213ENST00000473598 SLC5A1P13866 664 aa17.87■□□□□ 0.45
LMNA-213ENST00000473598 CHMLP26374 656 aa17.87■□□□□ 0.45
LMNA-213ENST00000473598 HOXA10P31260 410 aaPredicted RBP17.87■□□□□ 0.45
LMNA-213ENST00000473598 MFAP1P55081 439 aaKnown RBP17.87■□□□□ 0.45
LMNA-213ENST00000473598 PDE6BP35913 854 aa17.86■□□□□ 0.45
LMNA-213ENST00000473598 TTC39AQ5SRH9 613 aa17.86■□□□□ 0.45
LMNA-213ENST00000473598 IFIT1P09914 478 aaKnown RBP17.86■□□□□ 0.45
LMNA-213ENST00000473598 SNAP23O00161 211 aa17.85■□□□□ 0.45
LMNA-213ENST00000473598 ZNF512BQ96KM6 892 aaPredicted RBP17.85■□□□□ 0.45
LMNA-213ENST00000473598 CRAMP1Q96RY5 1269 aa17.85■□□□□ 0.45
LMNA-213ENST00000473598 ANKRD2Q9GZV1 360 aa17.85■□□□□ 0.45
LMNA-213ENST00000473598 H0YIN7 160 aa17.84■□□□□ 0.45
LMNA-213ENST00000473598 SRGNP10124 158 aa17.84■□□□□ 0.45
LMNA-213ENST00000473598 UBE4AQ14139 1066 aa17.84■□□□□ 0.45
LMNA-213ENST00000473598 DNAJC2Q99543 621 aaKnown RBP17.84■□□□□ 0.45
LMNA-213ENST00000473598 ZNF622Q969S3 477 aaKnown RBP eCLIP17.84■□□□□ 0.452e-8■■□□□ 12.1
LMNA-213ENST00000473598 C22orf23Q9BZE7 217 aa17.84■□□□□ 0.45
LMNA-213ENST00000473598 NDUFB9Q9Y6M9 179 aa17.84■□□□□ 0.45
LMNA-213ENST00000473598 LRRC37AA6NMS7 1700 aa17.83■□□□□ 0.45
LMNA-213ENST00000473598 BRCA1P38398 1863 aaKnown RBP17.83■□□□□ 0.45
LMNA-213ENST00000473598 CACNA1SQ13698 1873 aa17.83■□□□□ 0.45
LMNA-213ENST00000473598 CCDC102BQ68D86 513 aa17.83■□□□□ 0.45
LMNA-213ENST00000473598 EDC3Q96F86 508 aaKnown RBP17.83■□□□□ 0.45
LMNA-213ENST00000473598 BBOX1O75936 387 aa17.82■□□□□ 0.44
LMNA-213ENST00000473598 BECN1Q14457 450 aa17.82■□□□□ 0.44
LMNA-213ENST00000473598 ESYT1Q9BSJ8 1104 aa17.82■□□□□ 0.44
LMNA-213ENST00000473598 PAG1Q9NWQ8 432 aa17.82■□□□□ 0.44
LMNA-213ENST00000473598 DLEC1Q9Y238 1755 aa17.82■□□□□ 0.44
LMNA-213ENST00000473598 NPR1P16066 1061 aa17.82■□□□□ 0.44
LMNA-213ENST00000473598 YBX3P16989 372 aaKnown RBP eCLIP17.82■□□□□ 0.44
LMNA-213ENST00000473598 ARID4AP29374 1257 aaPredicted RBP17.82■□□□□ 0.44
LMNA-213ENST00000473598 PHKA1P46020 1223 aa17.82■□□□□ 0.44
LMNA-213ENST00000473598 FSD1Q9BTV5 496 aa17.82■□□□□ 0.44
LMNA-213ENST00000473598 MYH7P12883 1935 aa17.82■□□□□ 0.44
LMNA-213ENST00000473598 UQCRFS1P1P0C7P4 283 aa17.81■□□□□ 0.44
LMNA-213ENST00000473598 SCARF1Q14162 830 aa17.81■□□□□ 0.44
LMNA-213ENST00000473598 SLC51AQ86UW1 340 aa17.81■□□□□ 0.44
LMNA-213ENST00000473598 BCS1LQ9Y276 419 aa17.81■□□□□ 0.44
LMNA-213ENST00000473598 RFX7Q2KHR2 1363 aa17.81■□□□□ 0.44
LMNA-213ENST00000473598 WTIPA6NIX2 430 aaPredicted RBP17.81■□□□□ 0.44
LMNA-213ENST00000473598 HIP1O00291 1037 aa17.81■□□□□ 0.44
LMNA-213ENST00000473598 GOLIM4O00461 696 aa17.81■□□□□ 0.44
LMNA-213ENST00000473598 MCAMP43121 646 aa17.81■□□□□ 0.44
LMNA-213ENST00000473598 MASTLQ96GX5 879 aa17.81■□□□□ 0.44
LMNA-213ENST00000473598 DIAPH3Q9NSV4 1193 aa17.81■□□□□ 0.44
LMNA-213ENST00000473598 PIM2Q9P1W9 311 aa17.81■□□□□ 0.44
LMNA-213ENST00000473598 REC8O95072 547 aa17.8■□□□□ 0.44
LMNA-213ENST00000473598 TMC4Q7Z404 712 aa17.8■□□□□ 0.44
LMNA-213ENST00000473598 KBTBD3Q8NAB2 608 aa17.8■□□□□ 0.44
LMNA-213ENST00000473598 MYH13Q9UKX3 1938 aa17.8■□□□□ 0.44
LMNA-213ENST00000473598 MYO5AQ9Y4I1 1855 aaKnown RBP17.8■□□□□ 0.44
LMNA-213ENST00000473598 ALDH1B1P30837 517 aa17.79■□□□□ 0.44
LMNA-213ENST00000473598 KCNJ4P48050 445 aa17.79■□□□□ 0.44
LMNA-213ENST00000473598 FKBP4Q02790 459 aaKnown RBP eCLIP17.79■□□□□ 0.44
LMNA-213ENST00000473598 SNRKQ9NRH2 765 aa17.79■□□□□ 0.44
LMNA-213ENST00000473598 ZNF219Q9P2Y4 722 aaPredicted RBP17.79■□□□□ 0.44
LMNA-213ENST00000473598 ZNF804BA4D1E1 1349 aa17.79■□□□□ 0.44
LMNA-213ENST00000473598 XDHP47989 1333 aa17.79■□□□□ 0.44
LMNA-213ENST00000473598 ZAP70P43403 619 aa17.79■□□□□ 0.44
LMNA-213ENST00000473598 BCAMP50895 628 aa17.79■□□□□ 0.44
LMNA-213ENST00000473598 TICAM2Q86XR7 235 aa17.79■□□□□ 0.44
LMNA-213ENST00000473598 ANKIB1Q9P2G1 1089 aa17.79■□□□□ 0.44
LMNA-213ENST00000473598 LTBP1Q14766 1721 aa17.78■□□□□ 0.44
LMNA-213ENST00000473598 FSD2A1L4K1 749 aa17.78■□□□□ 0.44
LMNA-213ENST00000473598 RBM25P49756 843 aaKnown RBP17.78■□□□□ 0.44
LMNA-213ENST00000473598 GPR162Q16538 588 aa17.78■□□□□ 0.44
LMNA-213ENST00000473598 STYK1Q6J9G0 422 aa17.78■□□□□ 0.44
LMNA-213ENST00000473598 CWC27Q6UX04 472 aaKnown RBP17.78■□□□□ 0.44
LMNA-213ENST00000473598 RUFY2Q8WXA3 655 aa17.78■□□□□ 0.44
LMNA-213ENST00000473598 IL25Q9H293 177 aa17.78■□□□□ 0.44
LMNA-213ENST00000473598 ANTXR1Q9H6X2 564 aa17.78■□□□□ 0.44
LMNA-213ENST00000473598 LEMD3Q9Y2U8 911 aa17.78■□□□□ 0.44
LMNA-213ENST00000473598 SLX4Q8IY92 1834 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms