RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-208ENST00000472230 TTF1Q15361 905 aaPredicted RBP21.93■■□□□ 1.1
GCFC2-208ENST00000472230 NLRP3Q96P20 1036 aa21.93■■□□□ 1.1
GCFC2-208ENST00000472230 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.93■■□□□ 1.1
GCFC2-208ENST00000472230 ADCK5Q3MIX3 580 aa21.92■■□□□ 1.1
GCFC2-208ENST00000472230 AMIGO3Q86WK7 504 aa21.92■■□□□ 1.1
GCFC2-208ENST00000472230 TTC14Q96N46 770 aa21.92■■□□□ 1.1
GCFC2-208ENST00000472230 ZSWIM6Q9HCJ5 1215 aa21.92■■□□□ 1.1
GCFC2-208ENST00000472230 PDRG1Q9NUG6 133 aa21.92■■□□□ 1.1
GCFC2-208ENST00000472230 AKAP11Q9UKA4 1901 aa21.92■■□□□ 1.1
GCFC2-208ENST00000472230 NUCB2P80303 420 aa21.92■■□□□ 1.1
GCFC2-208ENST00000472230 ARID4AP29374 1257 aaPredicted RBP21.91■■□□□ 1.1
GCFC2-208ENST00000472230 PHKA1P46020 1223 aa21.91■■□□□ 1.1
GCFC2-208ENST00000472230 AK2P54819 239 aa21.91■■□□□ 1.1
GCFC2-208ENST00000472230 CHRNDQ07001 517 aa21.91■■□□□ 1.1
GCFC2-208ENST00000472230 CUL4AQ13619 759 aa21.91■■□□□ 1.1
GCFC2-208ENST00000472230 WASHC4Q2M389 1173 aa21.91■■□□□ 1.1
GCFC2-208ENST00000472230 ZSCAN25Q6NSZ9 544 aa21.91■■□□□ 1.1
GCFC2-208ENST00000472230 ZGPATQ8N5A5 531 aaKnown RBP21.91■■□□□ 1.1
GCFC2-208ENST00000472230 KRT32Q14532 448 aa21.91■■□□□ 1.1
GCFC2-208ENST00000472230 VPS53Q5VIR6 699 aa21.91■■□□□ 1.1
GCFC2-208ENST00000472230 PI16Q6UXB8 463 aa21.91■■□□□ 1.1
GCFC2-208ENST00000472230 C3orf67Q6ZVT6 689 aa21.91■■□□□ 1.1
GCFC2-208ENST00000472230 RUFY3Q7L099 469 aa21.91■■□□□ 1.1
GCFC2-208ENST00000472230 HMGB2P26583 209 aaKnown RBP21.9■■□□□ 1.1
GCFC2-208ENST00000472230 SLFNL1Q499Z3 407 aa21.9■■□□□ 1.1
GCFC2-208ENST00000472230 TNPO1Q92973 898 aaKnown RBP21.9■■□□□ 1.1
GCFC2-208ENST00000472230 MAST3O60307 1309 aa21.9■■□□□ 1.1
GCFC2-208ENST00000472230 CPA1P15085 419 aa21.9■■□□□ 1.1
GCFC2-208ENST00000472230 INTS4Q96HW7 963 aaKnown RBP21.9■■□□□ 1.1
GCFC2-208ENST00000472230 GBP4Q96PP9 640 aa21.9■■□□□ 1.1
GCFC2-208ENST00000472230 DSCC1Q9BVC3 393 aa21.9■■□□□ 1.1
GCFC2-208ENST00000472230 LIMCH1Q9UPQ0 1083 aa21.9■■□□□ 1.1
GCFC2-208ENST00000472230 MCM4P33991 863 aa21.89■■□□□ 1.09
GCFC2-208ENST00000472230 BLOC1S2Q6QNY1 142 aa21.89■■□□□ 1.09
GCFC2-208ENST00000472230 UBR3Q6ZT12 1888 aa21.89■■□□□ 1.09
GCFC2-208ENST00000472230 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.89■■□□□ 1.09
GCFC2-208ENST00000472230 TSGA10IPQ3SY00 556 aa21.89■■□□□ 1.09
GCFC2-208ENST00000472230 BSDC1Q9NW68 430 aaPredicted RBP21.89■■□□□ 1.09
GCFC2-208ENST00000472230 CARMIL3Q8ND23 1372 aa21.88■■□□□ 1.09
GCFC2-208ENST00000472230 RPAP1Q9BWH6 1393 aaPredicted RBP21.88■■□□□ 1.09
GCFC2-208ENST00000472230 APPBP2Q92624 585 aa21.88■■□□□ 1.09
GCFC2-208ENST00000472230 TAF1P21675 1872 aa21.88■■□□□ 1.09
GCFC2-208ENST00000472230 M0R2C6 588 aa21.87■■□□□ 1.09
GCFC2-208ENST00000472230 SNAP23O00161 211 aa21.87■■□□□ 1.09
GCFC2-208ENST00000472230 CYP2E1P05181 493 aaPredicted RBP21.87■■□□□ 1.09
GCFC2-208ENST00000472230 OSBP2Q969R2 916 aa21.87■■□□□ 1.09
GCFC2-208ENST00000472230 A0A1B0GUL6 1792 aa21.86■■□□□ 1.09
GCFC2-208ENST00000472230 COL4A1P02462 1669 aa21.86■■□□□ 1.09
GCFC2-208ENST00000472230 CCDC24Q8N4L8 307 aa21.86■■□□□ 1.09
GCFC2-208ENST00000472230 SPATA5Q8NB90 893 aa21.86■■□□□ 1.09
GCFC2-208ENST00000472230 ZSCAN31Q96LW9 406 aaPredicted RBP21.86■■□□□ 1.09
GCFC2-208ENST00000472230 DDX11L8A8MPP1 907 aa21.85■■□□□ 1.09
GCFC2-208ENST00000472230 IDH1O75874 414 aaKnown RBP21.85■■□□□ 1.09
GCFC2-208ENST00000472230 HSPD1P10809 573 aaKnown RBP21.85■■□□□ 1.09
GCFC2-208ENST00000472230 NFIXQ14938 502 aa21.85■■□□□ 1.09
GCFC2-208ENST00000472230 ANKRD1Q15327 319 aa21.85■■□□□ 1.09
GCFC2-208ENST00000472230 CELF1Q92879 486 aaKnown RBP21.85■■□□□ 1.09
GCFC2-208ENST00000472230 PIH1D3Q9NQM4 214 aaKnown RBP21.85■■□□□ 1.09
GCFC2-208ENST00000472230 RPS6KB1P23443 525 aa21.84■■□□□ 1.09
GCFC2-208ENST00000472230 RPS8P62241 208 aaKnown RBP21.84■■□□□ 1.09
GCFC2-208ENST00000472230 SLC9C2Q5TAH2 1124 aa21.84■■□□□ 1.09
GCFC2-208ENST00000472230 NEK1Q96PY6 1258 aa21.84■■□□□ 1.09
GCFC2-208ENST00000472230 CYP21A2P08686 494 aa21.83■■□□□ 1.09
GCFC2-208ENST00000472230 ADD2P35612 726 aa21.83■■□□□ 1.09
GCFC2-208ENST00000472230 UBE4AQ14139 1066 aa21.83■■□□□ 1.09
GCFC2-208ENST00000472230 TXNRD1Q16881 649 aa21.83■■□□□ 1.09
GCFC2-208ENST00000472230 CNBD1Q8NA66 436 aa21.83■■□□□ 1.09
GCFC2-208ENST00000472230 LARP6Q9BRS8 491 aaKnown RBP21.83■■□□□ 1.09
GCFC2-208ENST00000472230 MINPP1Q9UNW1 487 aa21.83■■□□□ 1.09
GCFC2-208ENST00000472230 BCAMP50895 628 aa21.83■■□□□ 1.09
GCFC2-208ENST00000472230 SH2B1Q9NRF2 756 aaPredicted RBP21.83■■□□□ 1.09
GCFC2-208ENST00000472230 TAF6LQ9Y6J9 622 aa21.83■■□□□ 1.09
GCFC2-208ENST00000472230 MYO5AQ9Y4I1 1855 aaKnown RBP21.83■■□□□ 1.08
GCFC2-208ENST00000472230 RASGRF1Q13972 1273 aa21.82■■□□□ 1.08
GCFC2-208ENST00000472230 GNL3LQ9NVN8 582 aaKnown RBP21.82■■□□□ 1.08
GCFC2-208ENST00000472230 CTNNA3Q9UI47 895 aa21.82■■□□□ 1.08
GCFC2-208ENST00000472230 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.82■■□□□ 1.08
GCFC2-208ENST00000472230 UBE3CQ15386 1083 aa21.81■■□□□ 1.08
GCFC2-208ENST00000472230 PUS7LQ9H0K6 701 aaKnown RBP21.81■■□□□ 1.08
GCFC2-208ENST00000472230 ALDH8A1Q9H2A2 487 aaPredicted RBP21.81■■□□□ 1.08
GCFC2-208ENST00000472230 MAP3K12Q12852 859 aa21.81■■□□□ 1.08
GCFC2-208ENST00000472230 CAVIN4Q5BKX8 364 aa21.81■■□□□ 1.08
GCFC2-208ENST00000472230 ANKRD2Q9GZV1 360 aa21.81■■□□□ 1.08
GCFC2-208ENST00000472230 DOCK2Q92608 1830 aa21.8■■□□□ 1.08
GCFC2-208ENST00000472230 TNRC6CQ9HCJ0 1690 aaKnown RBP21.8■■□□□ 1.08
GCFC2-208ENST00000472230 GOLGA6L22H0YM25 854 aa21.8■■□□□ 1.08
GCFC2-208ENST00000472230 GPAA1O43292 621 aa21.8■■□□□ 1.08
GCFC2-208ENST00000472230 GYS1P13807 737 aa21.8■■□□□ 1.08
GCFC2-208ENST00000472230 PTMSP20962 102 aa21.8■■□□□ 1.08
GCFC2-208ENST00000472230 RXRBP28702 533 aa21.8■■□□□ 1.08
GCFC2-208ENST00000472230 ZNF532Q9HCE3 1301 aa21.8■■□□□ 1.08
GCFC2-208ENST00000472230 HMGB1P09429 215 aaKnown RBP21.8■■□□□ 1.08
GCFC2-208ENST00000472230 PDE6AP16499 860 aa21.8■■□□□ 1.08
GCFC2-208ENST00000472230 VPS37DQ86XT2 251 aa21.8■■□□□ 1.08
GCFC2-208ENST00000472230 ST5P78524 1137 aa21.78■■□□□ 1.08
GCFC2-208ENST00000472230 PKP1Q13835 747 aa21.78■■□□□ 1.08
GCFC2-208ENST00000472230 TCEANC2Q96MN5 208 aa21.78■■□□□ 1.08
GCFC2-208ENST00000472230 WWC3Q9ULE0 1092 aa21.78■■□□□ 1.08
GCFC2-208ENST00000472230 APBA3O96018 575 aa21.78■■□□□ 1.08
GCFC2-208ENST00000472230 SMC3Q9UQE7 1217 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms