RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 ATG3Q9NT62 314 aa6.21□□□□□ -1.42
LMNB1-205ENST00000472034 V9GY48 417 aaPredicted RBP6.21□□□□□ -1.42
LMNB1-205ENST00000472034 COL11A2P13942 1736 aaPredicted RBP6.21□□□□□ -1.42
LMNB1-205ENST00000472034 MON2Q7Z3U7 1717 aa6.21□□□□□ -1.42
LMNB1-205ENST00000472034 PCDH11XQ9BZA7 1347 aa6.21□□□□□ -1.42
LMNB1-205ENST00000472034 PCDH11YQ9BZA8 1340 aa6.21□□□□□ -1.42
LMNB1-205ENST00000472034 USP42Q9H9J4 1324 aaKnown RBP6.21□□□□□ -1.42
LMNB1-205ENST00000472034 CD163L1Q9NR16 1453 aa6.21□□□□□ -1.42
LMNB1-205ENST00000472034 MUC3AQ02505 3323 aa6.2□□□□□ -1.42
LMNB1-205ENST00000472034 KTN1Q86UP2 1357 aaKnown RBP6.2□□□□□ -1.42
LMNB1-205ENST00000472034 COL5A3P25940 1745 aaPredicted RBP6.2□□□□□ -1.42
LMNB1-205ENST00000472034 EYSQ5T1H1 3165 aa6.2□□□□□ -1.42
LMNB1-205ENST00000472034 H0YGN5 161 aa6.2□□□□□ -1.42
LMNB1-205ENST00000472034 CELF2O95319 508 aaKnown RBP6.2□□□□□ -1.42
LMNB1-205ENST00000472034 USP17L8P0C7I0 530 aa6.2□□□□□ -1.42
LMNB1-205ENST00000472034 PNMA8AQ86V59 439 aaPredicted RBP6.2□□□□□ -1.42
LMNB1-205ENST00000472034 ZNF622Q969S3 477 aaKnown RBP eCLIP6.2□□□□□ -1.42
LMNB1-205ENST00000472034 PRKD2Q9BZL6 878 aa6.2□□□□□ -1.42
LMNB1-205ENST00000472034 RNF186Q9NXI6 227 aa6.2□□□□□ -1.42
LMNB1-205ENST00000472034 LTBP3Q9NS15 1303 aa6.2□□□□□ -1.42
LMNB1-205ENST00000472034 CACNA1SQ13698 1873 aa6.19□□□□□ -1.42
LMNB1-205ENST00000472034 FAM155AB1AL88 458 aaPredicted RBP6.19□□□□□ -1.42
LMNB1-205ENST00000472034 FLIIQ13045 1269 aa6.19□□□□□ -1.42
LMNB1-205ENST00000472034 NFIXQ14938 502 aa6.19□□□□□ -1.42
LMNB1-205ENST00000472034 DLK2Q6UY11 383 aa6.19□□□□□ -1.42
LMNB1-205ENST00000472034 BICDL1Q6ZP65 573 aa6.19□□□□□ -1.42
LMNB1-205ENST00000472034 RAPGEF4Q8WZA2 1011 aa6.19□□□□□ -1.42
LMNB1-205ENST00000472034 ZNF277Q9NRM2 450 aaPredicted RBP6.19□□□□□ -1.42
LMNB1-205ENST00000472034 SLX4Q8IY92 1834 aa6.19□□□□□ -1.42
LMNB1-205ENST00000472034 KIAA0100Q14667 2235 aaKnown RBP6.19□□□□□ -1.42
LMNB1-205ENST00000472034 ANKRD31Q8N7Z5 1873 aa6.19□□□□□ -1.42
LMNB1-205ENST00000472034 MAP3K19Q56UN5 1328 aa6.19□□□□□ -1.42
LMNB1-205ENST00000472034 CNTNAP4Q9C0A0 1308 aa6.19□□□□□ -1.42
LMNB1-205ENST00000472034 CENPJQ9HC77 1338 aaPredicted RBP6.19□□□□□ -1.42
LMNB1-205ENST00000472034 NRXN2Q9P2S2 1712 aa6.19□□□□□ -1.42
LMNB1-205ENST00000472034 H0YIN7 160 aa6.18□□□□□ -1.42
LMNB1-205ENST00000472034 SOX1O00570 391 aaPredicted RBP6.18□□□□□ -1.42
LMNB1-205ENST00000472034 PER1O15534 1290 aaPredicted RBP6.18□□□□□ -1.42
LMNB1-205ENST00000472034 TATP17735 454 aaPredicted RBP6.18□□□□□ -1.42
LMNB1-205ENST00000472034 HOXC9P31274 260 aa6.18□□□□□ -1.42
LMNB1-205ENST00000472034 EPS15P42566 896 aa6.18□□□□□ -1.42
LMNB1-205ENST00000472034 KIF23Q02241 960 aaPredicted RBP6.18□□□□□ -1.42
LMNB1-205ENST00000472034 RC3H1Q5TC82 1133 aaKnown RBP6.18□□□□□ -1.42
LMNB1-205ENST00000472034 USPL1Q5W0Q7 1092 aa6.18□□□□□ -1.42
LMNB1-205ENST00000472034 OLFM4Q6UX06 510 aa6.18□□□□□ -1.42
LMNB1-205ENST00000472034 GLIS2Q9BZE0 524 aaPredicted RBP6.18□□□□□ -1.42
LMNB1-205ENST00000472034 UNC93B1Q9H1C4 597 aa6.18□□□□□ -1.42
LMNB1-205ENST00000472034 ZNF408Q9H9D4 720 aa6.18□□□□□ -1.42
LMNB1-205ENST00000472034 PRDM6Q9NQX0 595 aa6.18□□□□□ -1.42
LMNB1-205ENST00000472034 TMOD3Q9NYL9 352 aa6.18□□□□□ -1.42
LMNB1-205ENST00000472034 PAPPA2Q9BXP8 1791 aa6.18□□□□□ -1.42
LMNB1-205ENST00000472034 SBNO2Q9Y2G9 1366 aa6.18□□□□□ -1.42
LMNB1-205ENST00000472034 SERPINB2P05120 415 aa6.17□□□□□ -1.42
LMNB1-205ENST00000472034 EN2P19622 333 aaPredicted RBP6.17□□□□□ -1.42
LMNB1-205ENST00000472034 CRKLP46109 303 aaKnown RBP6.17□□□□□ -1.42
LMNB1-205ENST00000472034 NOGQ13253 232 aa6.17□□□□□ -1.42
LMNB1-205ENST00000472034 AKAP4Q5JQC9 854 aa6.17□□□□□ -1.42
LMNB1-205ENST00000472034 NPM2Q86SE8 214 aaKnown RBP6.17□□□□□ -1.42
LMNB1-205ENST00000472034 LRRN4Q8WUT4 740 aa6.17□□□□□ -1.42
LMNB1-205ENST00000472034 SAGE1Q9NXZ1 904 aa6.17□□□□□ -1.42
LMNB1-205ENST00000472034 GTF3C3Q9Y5Q9 886 aa6.17□□□□□ -1.42
LMNB1-205ENST00000472034 INSRP06213 1382 aa6.17□□□□□ -1.42
LMNB1-205ENST00000472034 COL4A5P29400 1685 aa6.17□□□□□ -1.42
LMNB1-205ENST00000472034 SMG6Q86US8 1419 aaKnown RBP6.16□□□□□ -1.42
LMNB1-205ENST00000472034 F12P00748 615 aaPredicted RBP6.16□□□□□ -1.42
LMNB1-205ENST00000472034 SCNN1DP51172 638 aa6.16□□□□□ -1.42
LMNB1-205ENST00000472034 TRIM32Q13049 653 aa6.16□□□□□ -1.42
LMNB1-205ENST00000472034 SPRYD7Q5W111 196 aa6.16□□□□□ -1.42
LMNB1-205ENST00000472034 ZNF296Q8WUU4 475 aaPredicted RBP6.16□□□□□ -1.42
LMNB1-205ENST00000472034 GPKOWQ92917 476 aaPredicted RBP eCLIP6.16□□□□□ -1.42
LMNB1-205ENST00000472034 MAP10Q9P2G4 905 aa6.16□□□□□ -1.42
LMNB1-205ENST00000472034 GJA3Q9Y6H8 435 aa6.16□□□□□ -1.42
LMNB1-205ENST00000472034 CGNL1Q0VF96 1302 aa6.16□□□□□ -1.42
LMNB1-205ENST00000472034 PRUNE2Q8WUY3 3088 aa6.15□□□□□ -1.42
LMNB1-205ENST00000472034 AMPHP49418 695 aa6.15□□□□□ -1.42
LMNB1-205ENST00000472034 WNT7BP56706 349 aa6.15□□□□□ -1.42
LMNB1-205ENST00000472034 HUNKP57058 714 aa6.15□□□□□ -1.42
LMNB1-205ENST00000472034 AGERQ15109 404 aa6.15□□□□□ -1.42
LMNB1-205ENST00000472034 NR6A1Q15406 480 aa6.15□□□□□ -1.42
LMNB1-205ENST00000472034 PLA2G2CQ5R387 149 aa6.15□□□□□ -1.42
LMNB1-205ENST00000472034 PRPF40BQ6NWY9 871 aaKnown RBP6.15□□□□□ -1.42
LMNB1-205ENST00000472034 LIAT1Q6ZQX7 453 aa6.15□□□□□ -1.42
LMNB1-205ENST00000472034 ZNF598Q86UK7 904 aaKnown RBP6.15□□□□□ -1.42
LMNB1-205ENST00000472034 HHIPL1Q96JK4 782 aa6.15□□□□□ -1.42
LMNB1-205ENST00000472034 CSRNP1Q96S65 589 aa6.15□□□□□ -1.42
LMNB1-205ENST00000472034 AKAP11Q9UKA4 1901 aa6.15□□□□□ -1.43
LMNB1-205ENST00000472034 LAMB4A4D0S4 1761 aa6.14□□□□□ -1.43
LMNB1-205ENST00000472034 FZD9O00144 591 aa6.14□□□□□ -1.43
LMNB1-205ENST00000472034 RAD21O60216 631 aa6.14□□□□□ -1.43
LMNB1-205ENST00000472034 TBC1D8O95759 1140 aa6.14□□□□□ -1.43
LMNB1-205ENST00000472034 PKN2Q16513 984 aaKnown RBP6.14□□□□□ -1.43
LMNB1-205ENST00000472034 ZNF697Q5TEC3 545 aa6.14□□□□□ -1.43
LMNB1-205ENST00000472034 PTCRAQ6ISU1 281 aaPredicted RBP6.14□□□□□ -1.43
LMNB1-205ENST00000472034 INTS5Q6P9B9 1019 aaKnown RBP6.14□□□□□ -1.43
LMNB1-205ENST00000472034 FBXO46Q6PJ61 603 aaPredicted RBP6.14□□□□□ -1.43
LMNB1-205ENST00000472034 WWC1Q8IX03 1113 aa6.14□□□□□ -1.43
LMNB1-205ENST00000472034 GPC2Q8N158 579 aa6.14□□□□□ -1.43
LMNB1-205ENST00000472034 FKBPLQ9UIM3 349 aa6.14□□□□□ -1.43
LMNB1-205ENST00000472034 HDAC9Q9UKV0 1011 aa6.14□□□□□ -1.43
LMNB1-205ENST00000472034 NDUFB9Q9Y6M9 179 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms