RNA–Protein interactions for RNA: ENST00000471563.5

GCOM1-206, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-206ENST00000471563 SNRKQ9NRH2 765 aa18.13■□□□□ 0.49
GCOM1-206ENST00000471563 AKAP2Q9Y2D5 859 aa18.13■□□□□ 0.49
GCOM1-206ENST00000471563 GORABQ5T7V8 394 aa18.12■□□□□ 0.49
GCOM1-206ENST00000471563 CCDC129Q6ZRS4 1044 aa18.12■□□□□ 0.49
GCOM1-206ENST00000471563 C3orf67Q6ZVT6 689 aa18.12■□□□□ 0.49
GCOM1-206ENST00000471563 MED23Q9ULK4 1368 aa18.12■□□□□ 0.49
GCOM1-206ENST00000471563 SBF2Q86WG5 1849 aa18.12■□□□□ 0.49
GCOM1-206ENST00000471563 BCORQ6W2J9 1755 aa18.12■□□□□ 0.49
GCOM1-206ENST00000471563 SNAP23O00161 211 aa18.12■□□□□ 0.49
GCOM1-206ENST00000471563 DYNC1I1O14576 645 aa18.12■□□□□ 0.49
GCOM1-206ENST00000471563 ATP2B3Q16720 1220 aa18.12■□□□□ 0.49
GCOM1-206ENST00000471563 ERFEQ4G0M1 354 aa18.12■□□□□ 0.49
GCOM1-206ENST00000471563 RC3H1Q5TC82 1133 aaKnown RBP18.12■□□□□ 0.49
GCOM1-206ENST00000471563 SASS6Q6UVJ0 657 aa18.12■□□□□ 0.49
GCOM1-206ENST00000471563 PI16Q6UXB8 463 aa18.12■□□□□ 0.49
GCOM1-206ENST00000471563 KBTBD3Q8NAB2 608 aa18.12■□□□□ 0.49
GCOM1-206ENST00000471563 LRRC4BQ9NT99 713 aa18.12■□□□□ 0.49
GCOM1-206ENST00000471563 WDR33Q9C0J8 1336 aaKnown RBP18.11■□□□□ 0.49
GCOM1-206ENST00000471563 FKBP4Q02790 459 aaKnown RBP eCLIP18.11■□□□□ 0.49
GCOM1-206ENST00000471563 AK7Q96M32 723 aa18.11■□□□□ 0.49
GCOM1-206ENST00000471563 CPA1P15085 419 aa18.11■□□□□ 0.49
GCOM1-206ENST00000471563 RBM8AQ9Y5S9 174 aaKnown RBP18.11■□□□□ 0.49
GCOM1-206ENST00000471563 DDX60Q8IY21 1712 aaKnown RBP18.11■□□□□ 0.49
GCOM1-206ENST00000471563 PDE8BO95263 885 aa18.1■□□□□ 0.49
GCOM1-206ENST00000471563 ADCK5Q3MIX3 580 aa18.1■□□□□ 0.49
GCOM1-206ENST00000471563 CCDC158Q5M9N0 1113 aa18.1■□□□□ 0.49
GCOM1-206ENST00000471563 TTC39AQ5SRH9 613 aa18.1■□□□□ 0.49
GCOM1-206ENST00000471563 ARHGEF1Q92888 912 aaKnown RBP18.1■□□□□ 0.49
GCOM1-206ENST00000471563 MAP4K1Q92918 833 aa18.1■□□□□ 0.49
GCOM1-206ENST00000471563 FAM13BQ9NYF5 915 aa18.1■□□□□ 0.49
GCOM1-206ENST00000471563 NARFQ9UHQ1 456 aa18.1■□□□□ 0.49
GCOM1-206ENST00000471563 PTMAP06454 111 aaKnown RBP18.1■□□□□ 0.49
GCOM1-206ENST00000471563 NECTIN1Q15223 517 aa18.1■□□□□ 0.49
GCOM1-206ENST00000471563 TMEM87AQ8NBN3 555 aa18.1■□□□□ 0.49
GCOM1-206ENST00000471563 BCL11BQ9C0K0 894 aaPredicted RBP18.1■□□□□ 0.49
GCOM1-206ENST00000471563 RTCBQ9Y3I0 505 aaKnown RBP18.1■□□□□ 0.49
GCOM1-206ENST00000471563 COL4A1P02462 1669 aa18.1■□□□□ 0.49
GCOM1-206ENST00000471563 TAF5LO75529 589 aa18.09■□□□□ 0.49
GCOM1-206ENST00000471563 KIAA2012Q0VF49 1180 aa18.09■□□□□ 0.49
GCOM1-206ENST00000471563 COL9A3Q14050 684 aaPredicted RBP18.09■□□□□ 0.49
GCOM1-206ENST00000471563 CCDC24Q8N4L8 307 aa18.09■□□□□ 0.49
GCOM1-206ENST00000471563 FAM184AQ8NB25 1140 aa18.09■□□□□ 0.49
GCOM1-206ENST00000471563 TAF6LQ9Y6J9 622 aa18.09■□□□□ 0.49
GCOM1-206ENST00000471563 GADD45BO75293 160 aaPredicted RBP18.09■□□□□ 0.49
GCOM1-206ENST00000471563 UVSSAQ2YD98 709 aa18.09■□□□□ 0.49
GCOM1-206ENST00000471563 CCDC152Q4G0S7 254 aa18.09■□□□□ 0.49
GCOM1-206ENST00000471563 MTERF4Q7Z6M4 381 aaKnown RBP18.09■□□□□ 0.49
GCOM1-206ENST00000471563 ZPR1O75312 459 aa18.08■□□□□ 0.48
GCOM1-206ENST00000471563 KCNJ4P48050 445 aa18.08■□□□□ 0.48
GCOM1-206ENST00000471563 FAM196AQ6ZSG2 479 aa18.08■□□□□ 0.48
GCOM1-206ENST00000471563 USP48Q86UV5 1035 aa18.08■□□□□ 0.48
GCOM1-206ENST00000471563 MPHOSPH8Q99549 860 aa18.08■□□□□ 0.48
GCOM1-206ENST00000471563 LARP6Q9BRS8 491 aaKnown RBP18.08■□□□□ 0.48
GCOM1-206ENST00000471563 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.08■□□□□ 0.48
GCOM1-206ENST00000471563 LY75O60449 1722 aa18.08■□□□□ 0.48
GCOM1-206ENST00000471563 TRIM37O94972 964 aa18.07■□□□□ 0.48
GCOM1-206ENST00000471563 ZAP70P43403 619 aa18.07■□□□□ 0.48
GCOM1-206ENST00000471563 CREB3L3Q68CJ9 461 aa18.07■□□□□ 0.48
GCOM1-206ENST00000471563 KRT27Q7Z3Y8 459 aa18.07■□□□□ 0.48
GCOM1-206ENST00000471563 ABCC12Q96J65 1359 aa18.07■□□□□ 0.48
GCOM1-206ENST00000471563 RPAP1Q9BWH6 1393 aaPredicted RBP18.07■□□□□ 0.48
GCOM1-206ENST00000471563 LRP5O75197 1615 aa18.06■□□□□ 0.48
GCOM1-206ENST00000471563 CASTP20810 708 aaKnown RBP18.06■□□□□ 0.48
GCOM1-206ENST00000471563 MCAMP43121 646 aa18.06■□□□□ 0.48
GCOM1-206ENST00000471563 MCMDC2Q4G0Z9 681 aa18.06■□□□□ 0.48
GCOM1-206ENST00000471563 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.06■□□□□ 0.48
GCOM1-206ENST00000471563 TAF1LQ8IZX4 1826 aa18.06■□□□□ 0.48
GCOM1-206ENST00000471563 RFX7Q2KHR2 1363 aa18.06■□□□□ 0.48
GCOM1-206ENST00000471563 SCN7AQ01118 1682 aa18.06■□□□□ 0.48
GCOM1-206ENST00000471563 SLC27A2O14975 620 aa18.06■□□□□ 0.48
GCOM1-206ENST00000471563 GTF2E1P29083 439 aaPredicted RBP18.06■□□□□ 0.48
GCOM1-206ENST00000471563 KCNB2Q92953 911 aa18.06■□□□□ 0.48
GCOM1-206ENST00000471563 JAKMIP1Q96N16 626 aaKnown RBP18.06■□□□□ 0.48
GCOM1-206ENST00000471563 GDPD2Q9HCC8 539 aa18.06■□□□□ 0.48
GCOM1-206ENST00000471563 PHKA1P46020 1223 aa18.05■□□□□ 0.48
GCOM1-206ENST00000471563 CCDC183Q5T5S1 534 aa18.05■□□□□ 0.48
GCOM1-206ENST00000471563 TTC14Q96N46 770 aa18.05■□□□□ 0.48
GCOM1-206ENST00000471563 SETDB2Q96T68 719 aa18.05■□□□□ 0.48
GCOM1-206ENST00000471563 MROH5Q6ZUA9 1318 aa18.05■□□□□ 0.48
GCOM1-206ENST00000471563 FGFR2P21802 821 aa18.05■□□□□ 0.48
GCOM1-206ENST00000471563 PUM3Q15397 648 aaKnown RBP18.05■□□□□ 0.48
GCOM1-206ENST00000471563 VPS53Q5VIR6 699 aa18.05■□□□□ 0.48
GCOM1-206ENST00000471563 BRWD3Q6RI45 1802 aa18.05■□□□□ 0.48
GCOM1-206ENST00000471563 C4BP0C0L5 1744 aa18.04■□□□□ 0.48
GCOM1-206ENST00000471563 WTIPA6NIX2 430 aaPredicted RBP18.04■□□□□ 0.48
GCOM1-206ENST00000471563 IGHMBP2P38935 993 aaKnown RBP18.04■□□□□ 0.48
GCOM1-206ENST00000471563 CCDC102BQ68D86 513 aa18.04■□□□□ 0.48
GCOM1-206ENST00000471563 LETM1O95202 739 aaPredicted RBP18.03■□□□□ 0.48
GCOM1-206ENST00000471563 RFC4P35249 363 aa18.03■□□□□ 0.48
GCOM1-206ENST00000471563 AK2P54819 239 aa18.03■□□□□ 0.48
GCOM1-206ENST00000471563 FOXD4L6Q3SYB3 417 aaPredicted RBP18.03■□□□□ 0.48
GCOM1-206ENST00000471563 ZMYM1Q5SVZ6 1142 aa18.03■□□□□ 0.48
GCOM1-206ENST00000471563 TRAPPC3LQ5T215 181 aa18.03■□□□□ 0.48
GCOM1-206ENST00000471563 FOXD4L3Q6VB84 417 aaPredicted RBP18.03■□□□□ 0.48
GCOM1-206ENST00000471563 NBPF5PQ86XG9 351 aaPredicted RBP18.03■□□□□ 0.48
GCOM1-206ENST00000471563 TAF1P21675 1872 aa18.03■□□□□ 0.48
GCOM1-206ENST00000471563 RNF113AO15541 343 aaKnown RBP18.03■□□□□ 0.48
GCOM1-206ENST00000471563 ZKSCAN1P17029 563 aaPredicted RBP18.03■□□□□ 0.48
GCOM1-206ENST00000471563 LPIN2Q92539 896 aa18.03■□□□□ 0.48
GCOM1-206ENST00000471563 RTL9Q8NET4 1388 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms