RNA–Protein interactions for RNA: ENST00000470121.5

CCNL1-212, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-212ENST00000470121 CCDC102BQ68D86 513 aa16.58■□□□□ 0.24
CCNL1-212ENST00000470121 PI16Q6UXB8 463 aa16.58■□□□□ 0.24
CCNL1-212ENST00000470121 NEK1Q96PY6 1258 aa16.58■□□□□ 0.24
CCNL1-212ENST00000470121 ARAP2Q8WZ64 1704 aa16.58■□□□□ 0.24
CCNL1-212ENST00000470121 HSPA1LP34931 641 aa16.57■□□□□ 0.24
CCNL1-212ENST00000470121 STOX1Q6ZVD7 989 aa16.57■□□□□ 0.24
CCNL1-212ENST00000470121 ATRNO75882 1429 aa16.57■□□□□ 0.24
CCNL1-212ENST00000470121 FSD2A1L4K1 749 aa16.56■□□□□ 0.24
CCNL1-212ENST00000470121 PHKA1P46020 1223 aa16.56■□□□□ 0.24
CCNL1-212ENST00000470121 SF3B3Q15393 1217 aaKnown RBP16.56■□□□□ 0.24
CCNL1-212ENST00000470121 SLC10A5Q5PT55 438 aa16.56■□□□□ 0.24
CCNL1-212ENST00000470121 FAM182BQ5T319 152 aa16.56■□□□□ 0.24
CCNL1-212ENST00000470121 CCDC83Q8IWF9 413 aa16.56■□□□□ 0.24
CCNL1-212ENST00000470121 HELBQ8NG08 1087 aaPredicted RBP16.56■□□□□ 0.24
CCNL1-212ENST00000470121 MPHOSPH8Q99549 860 aa16.56■□□□□ 0.24
CCNL1-212ENST00000470121 GZF1Q9H116 711 aaPredicted RBP16.56■□□□□ 0.24
CCNL1-212ENST00000470121 NARFQ9UHQ1 456 aa16.56■□□□□ 0.24
CCNL1-212ENST00000470121 AFF2P51816 1311 aa16.56■□□□□ 0.24
CCNL1-212ENST00000470121 WDR33Q9C0J8 1336 aaKnown RBP16.56■□□□□ 0.24
CCNL1-212ENST00000470121 SCN7AQ01118 1682 aa16.56■□□□□ 0.24
CCNL1-212ENST00000470121 FOXP2O15409 715 aa16.56■□□□□ 0.24
CCNL1-212ENST00000470121 UQCRFS1P1P0C7P4 283 aa16.56■□□□□ 0.24
CCNL1-212ENST00000470121 KLHL40Q2TBA0 621 aa16.56■□□□□ 0.24
CCNL1-212ENST00000470121 ERFEQ4G0M1 354 aa16.56■□□□□ 0.24
CCNL1-212ENST00000470121 SMIM5Q71RC9 77 aa16.56■□□□□ 0.24
CCNL1-212ENST00000470121 APPBP2Q92624 585 aa16.56■□□□□ 0.24
CCNL1-212ENST00000470121 SMC3Q9UQE7 1217 aa16.56■□□□□ 0.24
CCNL1-212ENST00000470121 CHAMP1Q96JM3 812 aa16.55■□□□□ 0.24
CCNL1-212ENST00000470121 TCEANC2Q96MN5 208 aa16.55■□□□□ 0.24
CCNL1-212ENST00000470121 SLC5A1P13866 664 aa16.54■□□□□ 0.24
CCNL1-212ENST00000470121 ADD2P35612 726 aa16.54■□□□□ 0.24
CCNL1-212ENST00000470121 IGHMBP2P38935 993 aaKnown RBP16.54■□□□□ 0.24
CCNL1-212ENST00000470121 TTF1Q15361 905 aaPredicted RBP16.54■□□□□ 0.24
CCNL1-212ENST00000470121 MEX3CQ5U5Q3 659 aaKnown RBP16.54■□□□□ 0.24
CCNL1-212ENST00000470121 FOXD4L5Q5VV16 416 aaPredicted RBP16.54■□□□□ 0.24
CCNL1-212ENST00000470121 TBC1D9BQ66K14 1250 aa16.54■□□□□ 0.24
CCNL1-212ENST00000470121 NECAB1Q8N987 351 aa16.54■□□□□ 0.24
CCNL1-212ENST00000470121 FOXD4L4Q8WXT5 416 aaPredicted RBP16.54■□□□□ 0.24
CCNL1-212ENST00000470121 PUS7LQ9H0K6 701 aaKnown RBP16.54■□□□□ 0.24
CCNL1-212ENST00000470121 PIH1D3Q9NQM4 214 aaKnown RBP16.54■□□□□ 0.24
CCNL1-212ENST00000470121 COL4A1P02462 1669 aa16.54■□□□□ 0.24
CCNL1-212ENST00000470121 LY75O60449 1722 aa16.54■□□□□ 0.24
CCNL1-212ENST00000470121 MYH7P12883 1935 aa16.54■□□□□ 0.24
CCNL1-212ENST00000470121 A0A0G2JLW4 131 aa16.54■□□□□ 0.24
CCNL1-212ENST00000470121 SYT1P21579 422 aa16.54■□□□□ 0.24
CCNL1-212ENST00000470121 C3orf67Q6ZVT6 689 aa16.54■□□□□ 0.24
CCNL1-212ENST00000470121 CCNL1Q9UK58 526 aaPredicted RBP16.54■□□□□ 0.24
CCNL1-212ENST00000470121 SBF2Q86WG5 1849 aa16.54■□□□□ 0.24
CCNL1-212ENST00000470121 SNAP23O00161 211 aa16.53■□□□□ 0.24
CCNL1-212ENST00000470121 GJB2P29033 226 aa16.53■□□□□ 0.24
CCNL1-212ENST00000470121 EXOSC10Q01780 885 aaKnown RBP16.53■□□□□ 0.24
CCNL1-212ENST00000470121 STX6O43752 255 aa16.52■□□□□ 0.24
CCNL1-212ENST00000470121 PRPF40AO75400 957 aaKnown RBP16.52■□□□□ 0.24
CCNL1-212ENST00000470121 HMGB1P09429 215 aaKnown RBP16.52■□□□□ 0.24
CCNL1-212ENST00000470121 UBE3CQ15386 1083 aa16.52■□□□□ 0.24
CCNL1-212ENST00000470121 WASHC4Q2M389 1173 aa16.52■□□□□ 0.24
CCNL1-212ENST00000470121 ZSCAN25Q6NSZ9 544 aa16.52■□□□□ 0.24
CCNL1-212ENST00000470121 AMIGO3Q86WK7 504 aa16.52■□□□□ 0.24
CCNL1-212ENST00000470121 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.52■□□□□ 0.242e-13■□□□□ 8.5
CCNL1-212ENST00000470121 SRP68Q9UHB9 627 aaKnown RBP16.52■□□□□ 0.24
CCNL1-212ENST00000470121 TRPC5Q9UL62 973 aaPredicted RBP16.52■□□□□ 0.24
CCNL1-212ENST00000470121 DDX49Q9Y6V7 483 aaKnown RBP16.52■□□□□ 0.24
CCNL1-212ENST00000470121 LAMA4Q16363 1823 aa16.52■□□□□ 0.23
CCNL1-212ENST00000470121 E7EWF7 191 aa16.52■□□□□ 0.23
CCNL1-212ENST00000470121 ZSCAN22P10073 491 aaPredicted RBP16.52■□□□□ 0.23
CCNL1-212ENST00000470121 CHRNDQ07001 517 aa16.52■□□□□ 0.23
CCNL1-212ENST00000470121 Q6ZUG5 572 aa16.52■□□□□ 0.23
CCNL1-212ENST00000470121 DHX32Q7L7V1 743 aaKnown RBP16.52■□□□□ 0.23
CCNL1-212ENST00000470121 CDC5LQ99459 802 aaKnown RBP16.52■□□□□ 0.23
CCNL1-212ENST00000470121 AGXT2Q9BYV1 514 aa16.52■□□□□ 0.23
CCNL1-212ENST00000470121 TAF1LQ8IZX4 1826 aa16.51■□□□□ 0.23
CCNL1-212ENST00000470121 TCRBV5S4A2TA0A5A2 114 aa16.51■□□□□ 0.23
CCNL1-212ENST00000470121 GNPATO15228 680 aa16.51■□□□□ 0.23
CCNL1-212ENST00000470121 TTLL5Q6EMB2 1281 aa16.51■□□□□ 0.23
CCNL1-212ENST00000470121 SEPT12Q8IYM1 358 aa16.51■□□□□ 0.23
CCNL1-212ENST00000470121 CTNNA3Q9UI47 895 aa16.51■□□□□ 0.23
CCNL1-212ENST00000470121 COL24A1Q17RW2 1714 aa16.51■□□□□ 0.23
CCNL1-212ENST00000470121 GPAA1O43292 621 aa16.5■□□□□ 0.23
CCNL1-212ENST00000470121 FGAP02671 866 aa16.5■□□□□ 0.23
CCNL1-212ENST00000470121 SLC9C2Q5TAH2 1124 aa16.5■□□□□ 0.23
CCNL1-212ENST00000470121 SPATA5Q8NB90 893 aa16.5■□□□□ 0.23
CCNL1-212ENST00000470121 ARHGEF1Q92888 912 aaKnown RBP16.5■□□□□ 0.23
CCNL1-212ENST00000470121 MTMR6Q9Y217 621 aa16.5■□□□□ 0.23
CCNL1-212ENST00000470121 RTCBQ9Y3I0 505 aaKnown RBP16.5■□□□□ 0.23
CCNL1-212ENST00000470121 MYO5AQ9Y4I1 1855 aaKnown RBP16.5■□□□□ 0.23
CCNL1-212ENST00000470121 GOLGA6L3A6NEY3 463 aa16.5■□□□□ 0.23
CCNL1-212ENST00000470121 RASGRF1Q13972 1273 aa16.5■□□□□ 0.23
CCNL1-212ENST00000470121 L1TD1Q5T7N2 865 aaKnown RBP16.5■□□□□ 0.23
CCNL1-212ENST00000470121 BICDL1Q6ZP65 573 aa16.5■□□□□ 0.23
CCNL1-212ENST00000470121 GPT2Q8TD30 523 aa16.5■□□□□ 0.23
CCNL1-212ENST00000470121 NYXQ9GZU5 481 aa16.5■□□□□ 0.23
CCNL1-212ENST00000470121 BSDC1Q9NW68 430 aaPredicted RBP16.5■□□□□ 0.23
CCNL1-212ENST00000470121 CASZ1Q86V15 1759 aa16.49■□□□□ 0.23
CCNL1-212ENST00000470121 ZPR1O75312 459 aa16.49■□□□□ 0.23
CCNL1-212ENST00000470121 PDE6AP16499 860 aa16.49■□□□□ 0.23
CCNL1-212ENST00000470121 ANKRD18AQ8IVF6 992 aa16.49■□□□□ 0.23
CCNL1-212ENST00000470121 FBXL16Q8N461 479 aa16.49■□□□□ 0.23
CCNL1-212ENST00000470121 SETDB2Q96T68 719 aa16.49■□□□□ 0.23
CCNL1-212ENST00000470121 BCL11BQ9C0K0 894 aaPredicted RBP16.49■□□□□ 0.23
CCNL1-212ENST00000470121 F13A1P00488 732 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms