RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 ESYT1Q9BSJ8 1104 aa8.13□□□□□ -1.11
PTCD3-207ENST00000467273 C1orf115Q9H7X2 142 aa8.13□□□□□ -1.11
PTCD3-207ENST00000467273 STK26Q9P289 416 aa8.13□□□□□ -1.11
PTCD3-207ENST00000467273 NRKQ7Z2Y5 1582 aa8.13□□□□□ -1.11
PTCD3-207ENST00000467273 PIK3C2GO75747 1445 aa8.12□□□□□ -1.11
PTCD3-207ENST00000467273 SCO2A0A1W2PP80 73 aa8.12□□□□□ -1.11
PTCD3-207ENST00000467273 A6NJR5 290 aa8.12□□□□□ -1.11
PTCD3-207ENST00000467273 PLSCR1O15162 318 aa8.12□□□□□ -1.11
PTCD3-207ENST00000467273 IL2RAP01589 272 aa8.12□□□□□ -1.11
PTCD3-207ENST00000467273 EPXP11678 715 aa8.12□□□□□ -1.11
PTCD3-207ENST00000467273 DGKGP49619 791 aa8.12□□□□□ -1.11
PTCD3-207ENST00000467273 CTBSQ01459 385 aa8.12□□□□□ -1.11
PTCD3-207ENST00000467273 UBAP2LQ14157 1087 aaKnown RBP8.12□□□□□ -1.11
PTCD3-207ENST00000467273 LBRQ14739 615 aaKnown RBP8.12□□□□□ -1.11
PTCD3-207ENST00000467273 BTBD6Q96KE9 485 aa8.12□□□□□ -1.11
PTCD3-207ENST00000467273 PRDM11Q9NQV5 511 aa8.12□□□□□ -1.11
PTCD3-207ENST00000467273 ADGRF5Q8IZF2 1346 aa8.11□□□□□ -1.11
PTCD3-207ENST00000467273 LOC105371045A0A1W2PR82 267 aa8.11□□□□□ -1.11
PTCD3-207ENST00000467273 NEURL1BA8MQ27 555 aa8.11□□□□□ -1.11
PTCD3-207ENST00000467273 GNRH1P01148 92 aa8.11□□□□□ -1.11
PTCD3-207ENST00000467273 MSX1P28360 303 aa8.11□□□□□ -1.11
PTCD3-207ENST00000467273 RNF135Q8IUD6 432 aa8.11□□□□□ -1.11
PTCD3-207ENST00000467273 SNRKQ9NRH2 765 aa8.11□□□□□ -1.11
PTCD3-207ENST00000467273 THRAP3Q9Y2W1 955 aaKnown RBP8.11□□□□□ -1.11
PTCD3-207ENST00000467273 PARP4Q9UKK3 1724 aaKnown RBP8.11□□□□□ -1.11
PTCD3-207ENST00000467273 MAP3K5Q99683 1374 aa8.1□□□□□ -1.11
PTCD3-207ENST00000467273 ACIN1Q9UKV3 1341 aaKnown RBP8.1□□□□□ -1.11
PTCD3-207ENST00000467273 DLC1Q96QB1 1528 aa8.1□□□□□ -1.11
PTCD3-207ENST00000467273 BNIP3LO60238 219 aa8.1□□□□□ -1.11
PTCD3-207ENST00000467273 C4orf17Q53FE4 359 aa8.1□□□□□ -1.11
PTCD3-207ENST00000467273 POM121Q96HA1 1249 aa8.1□□□□□ -1.11
PTCD3-207ENST00000467273 MYOM1P52179 1685 aa8.1□□□□□ -1.11
PTCD3-207ENST00000467273 SPATA31E1Q6ZUB1 1445 aa8.1□□□□□ -1.11
PTCD3-207ENST00000467273 DHX57Q6P158 1386 aaKnown RBP8.1□□□□□ -1.11
PTCD3-207ENST00000467273 ATP7BP35670 1465 aa8.09□□□□□ -1.11
PTCD3-207ENST00000467273 APBB1O00213 710 aa8.09□□□□□ -1.11
PTCD3-207ENST00000467273 TMEM132EQ6IEE7 984 aa8.09□□□□□ -1.11
PTCD3-207ENST00000467273 KRTAP1-3Q8IUG1 177 aa8.09□□□□□ -1.11
PTCD3-207ENST00000467273 BANK1Q8NDB2 785 aa8.09□□□□□ -1.11
PTCD3-207ENST00000467273 PHRF1Q9P1Y6 1649 aaKnown RBP8.09□□□□□ -1.11
PTCD3-207ENST00000467273 OVOS2A0A0G2JMS6 1433 aa8.09□□□□□ -1.11
PTCD3-207ENST00000467273 OVOS2A0A0J9YW53 1432 aa8.09□□□□□ -1.11
PTCD3-207ENST00000467273 OVOS2Q6IE36 1432 aa8.09□□□□□ -1.11
PTCD3-207ENST00000467273 SSH2Q76I76 1423 aa8.09□□□□□ -1.11
PTCD3-207ENST00000467273 KIAA0232Q92628 1395 aa8.09□□□□□ -1.12
PTCD3-207ENST00000467273 MYCP01106 439 aaPredicted RBP8.08□□□□□ -1.12
PTCD3-207ENST00000467273 TMEM259Q4ZIN3 620 aa8.08□□□□□ -1.12
PTCD3-207ENST00000467273 CHSY3Q70JA7 882 aa8.08□□□□□ -1.12
PTCD3-207ENST00000467273 TCP11L2Q8N4U5 519 aa8.08□□□□□ -1.12
PTCD3-207ENST00000467273 ARID3AQ99856 593 aa8.08□□□□□ -1.12
PTCD3-207ENST00000467273 SYT17Q9BSW7 474 aa8.08□□□□□ -1.12
PTCD3-207ENST00000467273 C14orf93Q9H972 538 aaKnown RBP8.08□□□□□ -1.12
PTCD3-207ENST00000467273 PEAK1Q9H792 1746 aa8.08□□□□□ -1.12
PTCD3-207ENST00000467273 TULP4Q9NRJ4 1543 aa8.08□□□□□ -1.12
PTCD3-207ENST00000467273 BCL9O00512 1426 aa8.07□□□□□ -1.12
PTCD3-207ENST00000467273 ARAFP10398 606 aa8.07□□□□□ -1.12
PTCD3-207ENST00000467273 GATA4P43694 442 aa8.07□□□□□ -1.12
PTCD3-207ENST00000467273 PMFBP1Q8TBY8 1022 aa8.07□□□□□ -1.12
PTCD3-207ENST00000467273 SBF2Q86WG5 1849 aa8.07□□□□□ -1.12
PTCD3-207ENST00000467273 ITSN1Q15811 1721 aa8.06□□□□□ -1.12
PTCD3-207ENST00000467273 LMO7Q8WWI1 1683 aa8.06□□□□□ -1.12
PTCD3-207ENST00000467273 EVA1CP58658 441 aa8.06□□□□□ -1.12
PTCD3-207ENST00000467273 MCCD1P59942 119 aaPredicted RBP8.06□□□□□ -1.12
PTCD3-207ENST00000467273 ZNF592Q92610 1267 aa8.06□□□□□ -1.12
PTCD3-207ENST00000467273 PRAM1Q96QH2 718 aa8.06□□□□□ -1.12
PTCD3-207ENST00000467273 FHDC1Q9C0D6 1143 aaPredicted RBP8.06□□□□□ -1.12
PTCD3-207ENST00000467273 MTFR1LQ9H019 292 aa8.06□□□□□ -1.12
PTCD3-207ENST00000467273 STRN4Q9NRL3 753 aa8.06□□□□□ -1.12
PTCD3-207ENST00000467273 NDFIP2Q9NV92 336 aa8.06□□□□□ -1.12
PTCD3-207ENST00000467273 ZNF330Q9Y3S2 320 aaPredicted RBP8.06□□□□□ -1.12
PTCD3-207ENST00000467273 CPDO75976 1380 aa8.06□□□□□ -1.12
PTCD3-207ENST00000467273 AATKQ6ZMQ8 1374 aa8.06□□□□□ -1.12
PTCD3-207ENST00000467273 GOLGB1Q14789 3259 aaKnown RBP8.05□□□□□ -1.12
PTCD3-207ENST00000467273 RAD21O60216 631 aa8.05□□□□□ -1.12
PTCD3-207ENST00000467273 ITGAEP38570 1179 aa8.05□□□□□ -1.12
PTCD3-207ENST00000467273 NR1H3Q13133 447 aa8.05□□□□□ -1.12
PTCD3-207ENST00000467273 NGDNQ8NEJ9 315 aaKnown RBP8.05□□□□□ -1.12
PTCD3-207ENST00000467273 COG6Q9Y2V7 657 aa8.05□□□□□ -1.12
PTCD3-207ENST00000467273 ZBTB7AO95365 584 aa8.04□□□□□ -1.12
PTCD3-207ENST00000467273 FIGNL1Q6PIW4 674 aa8.04□□□□□ -1.12
PTCD3-207ENST00000467273 MTMR14Q8NCE2 650 aa8.04□□□□□ -1.12
PTCD3-207ENST00000467273 RHBDD1Q8TEB9 315 aa8.04□□□□□ -1.12
PTCD3-207ENST00000467273 XAGE2Q96GT9 111 aa8.04□□□□□ -1.12
PTCD3-207ENST00000467273 POGKQ9P215 609 aa8.04□□□□□ -1.12
PTCD3-207ENST00000467273 USP35Q9P2H5 1018 aa8.04□□□□□ -1.12
PTCD3-207ENST00000467273 HRH3Q9Y5N1 445 aa8.04□□□□□ -1.12
PTCD3-207ENST00000467273 ADH6P28332 368 aa8.03□□□□□ -1.12
PTCD3-207ENST00000467273 PLA2G4AP47712 749 aa8.03□□□□□ -1.12
PTCD3-207ENST00000467273 CHRNA2Q15822 529 aa8.03□□□□□ -1.12
PTCD3-207ENST00000467273 RGL3Q3MIN7 710 aa8.03□□□□□ -1.12
PTCD3-207ENST00000467273 TBC1D9Q6ZT07 1266 aa8.03□□□□□ -1.12
PTCD3-207ENST00000467273 CRISPLD1Q9H336 500 aa8.03□□□□□ -1.12
PTCD3-207ENST00000467273 STK32BQ9NY57 414 aa8.03□□□□□ -1.12
PTCD3-207ENST00000467273 LRRC37A3O60309 1634 aa8.03□□□□□ -1.12
PTCD3-207ENST00000467273 CRB1P82279 1406 aa8.03□□□□□ -1.12
PTCD3-207ENST00000467273 PRR36Q9H6K5 1346 aa8.03□□□□□ -1.12
PTCD3-207ENST00000467273 COL5A2P05997 1499 aaPredicted RBP8.02□□□□□ -1.13
PTCD3-207ENST00000467273 DCDC2BA2VCK2 349 aa8.02□□□□□ -1.13
PTCD3-207ENST00000467273 TLR1Q15399 786 aa8.02□□□□□ -1.13
PTCD3-207ENST00000467273 SLC15A2Q16348 729 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms