RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 ATRNO75882 1429 aa24.43■■□□□ 1.5
CCDC78-207ENST00000466708 MYH7P12883 1935 aa24.43■■□□□ 1.5
CCDC78-207ENST00000466708 HMGB1P09429 215 aaKnown RBP24.42■■□□□ 1.5
CCDC78-207ENST00000466708 CCDC102BQ68D86 513 aa24.42■■□□□ 1.5
CCDC78-207ENST00000466708 APPBP2Q92624 585 aa24.42■■□□□ 1.5
CCDC78-207ENST00000466708 SEC31BQ9NQW1 1179 aa24.42■■□□□ 1.5
CCDC78-207ENST00000466708 TRPC5Q9UL62 973 aaPredicted RBP24.42■■□□□ 1.5
CCDC78-207ENST00000466708 TAF6LQ9Y6J9 622 aa24.42■■□□□ 1.5
CCDC78-207ENST00000466708 OSBP2Q969R2 916 aa24.42■■□□□ 1.5
CCDC78-207ENST00000466708 CDC5LQ99459 802 aaKnown RBP24.42■■□□□ 1.5
CCDC78-207ENST00000466708 CCNL1Q9UK58 526 aaPredicted RBP24.42■■□□□ 1.5
CCDC78-207ENST00000466708 LARGE1O95461 756 aa24.41■■□□□ 1.5
CCDC78-207ENST00000466708 KCNQ4P56696 695 aa24.41■■□□□ 1.5
CCDC78-207ENST00000466708 LARP6Q9BRS8 491 aaKnown RBP24.41■■□□□ 1.5
CCDC78-207ENST00000466708 LY75O60449 1722 aa24.4■■□□□ 1.5
CCDC78-207ENST00000466708 SF3B3Q15393 1217 aaKnown RBP24.4■■□□□ 1.5
CCDC78-207ENST00000466708 ME3Q16798 604 aa24.4■■□□□ 1.5
CCDC78-207ENST00000466708 SLFNL1Q499Z3 407 aa24.4■■□□□ 1.5
CCDC78-207ENST00000466708 SBF2Q86WG5 1849 aa24.4■■□□□ 1.5
CCDC78-207ENST00000466708 M0R2C6 588 aa24.4■■□□□ 1.5
CCDC78-207ENST00000466708 PDIA4P13667 645 aaKnown RBP24.4■■□□□ 1.5
CCDC78-207ENST00000466708 WASHC4Q2M389 1173 aa24.4■■□□□ 1.5
CCDC78-207ENST00000466708 CCDC83Q8IWF9 413 aa24.4■■□□□ 1.5
CCDC78-207ENST00000466708 NYXQ9GZU5 481 aa24.4■■□□□ 1.5
CCDC78-207ENST00000466708 TPCN1Q9ULQ1 816 aa24.4■■□□□ 1.5
CCDC78-207ENST00000466708 PHKA1P46020 1223 aa24.39■■□□□ 1.49
CCDC78-207ENST00000466708 KLHL40Q2TBA0 621 aa24.39■■□□□ 1.49
CCDC78-207ENST00000466708 SLC10A5Q5PT55 438 aa24.39■■□□□ 1.49
CCDC78-207ENST00000466708 HELBQ8NG08 1087 aaPredicted RBP24.39■■□□□ 1.49
CCDC78-207ENST00000466708 CTNNA3Q9UI47 895 aa24.39■■□□□ 1.49
CCDC78-207ENST00000466708 RTCBQ9Y3I0 505 aaKnown RBP24.39■■□□□ 1.49
CCDC78-207ENST00000466708 TOB2Q14106 344 aaPredicted RBP24.38■■□□□ 1.49
CCDC78-207ENST00000466708 ERFEQ4G0M1 354 aa24.38■■□□□ 1.49
CCDC78-207ENST00000466708 PI16Q6UXB8 463 aa24.38■■□□□ 1.49
CCDC78-207ENST00000466708 GZF1Q9H116 711 aaPredicted RBP24.38■■□□□ 1.49
CCDC78-207ENST00000466708 BCL2L12Q9HB09 334 aa24.38■■□□□ 1.49
CCDC78-207ENST00000466708 LMBRD1Q9NUN5 540 aa24.38■■□□□ 1.49
CCDC78-207ENST00000466708 GNPATO15228 680 aa24.38■■□□□ 1.49
CCDC78-207ENST00000466708 ZPR1O75312 459 aa24.38■■□□□ 1.49
CCDC78-207ENST00000466708 TAF1LQ8IZX4 1826 aa24.37■■□□□ 1.49
CCDC78-207ENST00000466708 FAM182BQ5T319 152 aa24.37■■□□□ 1.49
CCDC78-207ENST00000466708 TBC1D9BQ66K14 1250 aa24.37■■□□□ 1.49
CCDC78-207ENST00000466708 DDX49Q9Y6V7 483 aaKnown RBP24.37■■□□□ 1.49
CCDC78-207ENST00000466708 ADD2P35612 726 aa24.36■■□□□ 1.49
CCDC78-207ENST00000466708 UBE3CQ15386 1083 aa24.36■■□□□ 1.49
CCDC78-207ENST00000466708 SEPT12Q8IYM1 358 aa24.36■■□□□ 1.49
CCDC78-207ENST00000466708 GTF2E1P29083 439 aaPredicted RBP24.35■■□□□ 1.49
CCDC78-207ENST00000466708 COL9A3Q14050 684 aaPredicted RBP24.35■■□□□ 1.49
CCDC78-207ENST00000466708 L1TD1Q5T7N2 865 aaKnown RBP24.35■■□□□ 1.49
CCDC78-207ENST00000466708 SETDB2Q96T68 719 aa24.35■■□□□ 1.49
CCDC78-207ENST00000466708 ISY1Q9ULR0 285 aaKnown RBP24.35■■□□□ 1.49
CCDC78-207ENST00000466708 STX6O43752 255 aa24.35■■□□□ 1.49
CCDC78-207ENST00000466708 SYT1P21579 422 aa24.35■■□□□ 1.49
CCDC78-207ENST00000466708 GJB2P29033 226 aa24.35■■□□□ 1.49
CCDC78-207ENST00000466708 DHX32Q7L7V1 743 aaKnown RBP24.35■■□□□ 1.49
CCDC78-207ENST00000466708 ANKRD18AQ8IVF6 992 aa24.35■■□□□ 1.49
CCDC78-207ENST00000466708 CHRNDQ07001 517 aa24.34■■□□□ 1.49
CCDC78-207ENST00000466708 FOXD4L5Q5VV16 416 aaPredicted RBP24.34■■□□□ 1.49
CCDC78-207ENST00000466708 FOXD4L4Q8WXT5 416 aaPredicted RBP24.34■■□□□ 1.49
CCDC78-207ENST00000466708 TCEANC2Q96MN5 208 aa24.34■■□□□ 1.49
CCDC78-207ENST00000466708 PUS7LQ9H0K6 701 aaKnown RBP24.34■■□□□ 1.49
CCDC78-207ENST00000466708 COL24A1Q17RW2 1714 aa24.34■■□□□ 1.49
CCDC78-207ENST00000466708 ZSCAN22P10073 491 aaPredicted RBP24.33■■□□□ 1.49
CCDC78-207ENST00000466708 ST3GAL1Q11201 340 aa24.33■■□□□ 1.49
CCDC78-207ENST00000466708 SLC9C2Q5TAH2 1124 aa24.33■■□□□ 1.49
CCDC78-207ENST00000466708 BICDL1Q6ZP65 573 aa24.33■■□□□ 1.49
CCDC78-207ENST00000466708 STOX1Q6ZVD7 989 aa24.33■■□□□ 1.49
CCDC78-207ENST00000466708 SPATA5Q8NB90 893 aa24.33■■□□□ 1.49
CCDC78-207ENST00000466708 BCL11BQ9C0K0 894 aaPredicted RBP24.33■■□□□ 1.49
CCDC78-207ENST00000466708 PIH1D3Q9NQM4 214 aaKnown RBP24.33■■□□□ 1.49
CCDC78-207ENST00000466708 E7EWF7 191 aa24.33■■□□□ 1.48
CCDC78-207ENST00000466708 BSDC1Q9NW68 430 aaPredicted RBP24.33■■□□□ 1.48
CCDC78-207ENST00000466708 LAMA4Q16363 1823 aa24.33■■□□□ 1.48
CCDC78-207ENST00000466708 FSD2A1L4K1 749 aa24.32■■□□□ 1.48
CCDC78-207ENST00000466708 GOLGA6L3A6NEY3 463 aa24.32■■□□□ 1.48
CCDC78-207ENST00000466708 GPAA1O43292 621 aa24.32■■□□□ 1.48
CCDC78-207ENST00000466708 PRPF40AO75400 957 aaKnown RBP24.32■■□□□ 1.48
CCDC78-207ENST00000466708 IMMTQ16891 758 aaKnown RBP24.32■■□□□ 1.48
CCDC78-207ENST00000466708 Q6ZUG5 572 aa24.32■■□□□ 1.48
CCDC78-207ENST00000466708 NECAB1Q8N987 351 aa24.32■■□□□ 1.48
CCDC78-207ENST00000466708 ARHGEF1Q92888 912 aaKnown RBP24.32■■□□□ 1.48
CCDC78-207ENST00000466708 SRP68Q9UHB9 627 aaKnown RBP24.32■■□□□ 1.48
CCDC78-207ENST00000466708 ATP6V1DQ9Y5K8 247 aa24.32■■□□□ 1.48
CCDC78-207ENST00000466708 IDH1O75874 414 aaKnown RBP24.31■■□□□ 1.48
CCDC78-207ENST00000466708 AEBP2Q6ZN18 517 aaPredicted RBP24.31■■□□□ 1.48
CCDC78-207ENST00000466708 CASZ1Q86V15 1759 aa24.31■■□□□ 1.48
CCDC78-207ENST00000466708 C4BP0C0L5 1744 aa24.31■■□□□ 1.48
CCDC78-207ENST00000466708 FOXP2O15409 715 aa24.31■■□□□ 1.48
CCDC78-207ENST00000466708 PDCP20941 246 aa24.31■■□□□ 1.48
CCDC78-207ENST00000466708 EXOSC10Q01780 885 aaKnown RBP24.31■■□□□ 1.48
CCDC78-207ENST00000466708 TPTE2Q6XPS3 522 aa24.31■■□□□ 1.48
CCDC78-207ENST00000466708 NBPF5PQ86XG9 351 aaPredicted RBP24.31■■□□□ 1.48
CCDC78-207ENST00000466708 AGXT2Q9BYV1 514 aa24.31■■□□□ 1.48
CCDC78-207ENST00000466708 FGAP02671 866 aa24.3■■□□□ 1.48
CCDC78-207ENST00000466708 RASGRF1Q13972 1273 aa24.3■■□□□ 1.48
CCDC78-207ENST00000466708 UBE4AQ14139 1066 aa24.3■■□□□ 1.48
CCDC78-207ENST00000466708 NLRP3Q96P20 1036 aa24.3■■□□□ 1.48
CCDC78-207ENST00000466708 DOCK2Q92608 1830 aa24.29■■□□□ 1.48
CCDC78-207ENST00000466708 PDE6AP16499 860 aa24.29■■□□□ 1.48
CCDC78-207ENST00000466708 FGD1P98174 961 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms