RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 FLAD1Q8NFF5 587 aa8.63□□□□□ -1.03
TPM3-214ENST00000466010 SPSB2Q99619 263 aa8.63□□□□□ -1.03
TPM3-214ENST00000466010 TFCP2L1Q9NZI6 479 aa8.63□□□□□ -1.03
TPM3-214ENST00000466010 PKD1L3Q7Z443 1732 aa8.63□□□□□ -1.03
TPM3-214ENST00000466010 SHANK3Q9BYB0 1731 aa8.63□□□□□ -1.03
TPM3-214ENST00000466010 NPC1L1Q9UHC9 1359 aa8.62□□□□□ -1.03
TPM3-214ENST00000466010 MAP2P11137 1827 aaKnown RBP8.62□□□□□ -1.03
TPM3-214ENST00000466010 MAGEB6P1A0A0J9YX57 407 aa8.62□□□□□ -1.03
TPM3-214ENST00000466010 ZBTB7AO95365 584 aa8.62□□□□□ -1.03
TPM3-214ENST00000466010 POLD1P28340 1107 aa8.62□□□□□ -1.03
TPM3-214ENST00000466010 TSGA10IPQ3SY00 556 aa8.62□□□□□ -1.03
TPM3-214ENST00000466010 MPRIPQ6WCQ1 1025 aa8.62□□□□□ -1.03
TPM3-214ENST00000466010 SLC10A4Q96EP9 437 aa8.62□□□□□ -1.03
TPM3-214ENST00000466010 LRRC4BQ9NT99 713 aa8.62□□□□□ -1.03
TPM3-214ENST00000466010 TMOD3Q9NYL9 352 aa8.62□□□□□ -1.03
TPM3-214ENST00000466010 TSR3Q9UJK0 312 aaKnown RBP8.62□□□□□ -1.03
TPM3-214ENST00000466010 RGPD2P0DJD1 1756 aa8.62□□□□□ -1.03
TPM3-214ENST00000466010 KAT6BQ8WYB5 2073 aa8.61□□□□□ -1.03
TPM3-214ENST00000466010 PALLDQ8WX93 1383 aa8.61□□□□□ -1.03
TPM3-214ENST00000466010 MAP3K5Q99683 1374 aa8.61□□□□□ -1.03
TPM3-214ENST00000466010 ERVV-2B6SEH9 535 aa8.61□□□□□ -1.03
TPM3-214ENST00000466010 CDK11BP21127 795 aaKnown RBP8.61□□□□□ -1.03
TPM3-214ENST00000466010 SF3A1Q15459 793 aaKnown RBP8.61□□□□□ -1.03
TPM3-214ENST00000466010 NBPF20Q3BBV1 942 aa8.61□□□□□ -1.03
TPM3-214ENST00000466010 PLEKHO1Q53GL0 409 aaPredicted RBP8.61□□□□□ -1.03
TPM3-214ENST00000466010 RGL4Q8IZJ4 473 aa8.61□□□□□ -1.03
TPM3-214ENST00000466010 DCAF5Q96JK2 942 aa8.61□□□□□ -1.03
TPM3-214ENST00000466010 UNC93B1Q9H1C4 597 aa8.61□□□□□ -1.03
TPM3-214ENST00000466010 LY75O60449 1722 aa8.6□□□□□ -1.03
TPM3-214ENST00000466010 QSER1Q2KHR3 1735 aa8.6□□□□□ -1.03
TPM3-214ENST00000466010 SOWAHBA6NEL2 793 aa8.6□□□□□ -1.03
TPM3-214ENST00000466010 M0R2N6 131 aa8.6□□□□□ -1.03
TPM3-214ENST00000466010 GIGYF1O75420 1035 aaPredicted RBP8.6□□□□□ -1.03
TPM3-214ENST00000466010 RECKO95980 971 aa8.6□□□□□ -1.03
TPM3-214ENST00000466010 PHKG2P15735 406 aa8.6□□□□□ -1.03
TPM3-214ENST00000466010 AGERQ15109 404 aa8.6□□□□□ -1.03
TPM3-214ENST00000466010 ZNF827Q17R98 1081 aa8.6□□□□□ -1.03
TPM3-214ENST00000466010 BPHLQ86WA6 291 aaPredicted RBP8.6□□□□□ -1.03
TPM3-214ENST00000466010 ZNF687Q8N1G0 1237 aa8.6□□□□□ -1.03
TPM3-214ENST00000466010 MKNK1Q9BUB5 465 aa8.6□□□□□ -1.03
TPM3-214ENST00000466010 KDRP35968 1356 aa8.6□□□□□ -1.03
TPM3-214ENST00000466010 FGD1P98174 961 aa8.59□□□□□ -1.03
TPM3-214ENST00000466010 TSNAXIP1Q2TAA8 658 aa8.59□□□□□ -1.03
TPM3-214ENST00000466010 C1orf141Q5JVX7 400 aa8.59□□□□□ -1.03
TPM3-214ENST00000466010 CCDC24Q8N4L8 307 aa8.59□□□□□ -1.03
TPM3-214ENST00000466010 SEPT3Q9UH03 358 aa8.59□□□□□ -1.03
TPM3-214ENST00000466010 PCDHGA11Q9Y5H2 935 aa8.59□□□□□ -1.03
TPM3-214ENST00000466010 DNMT3AQ9Y6K1 912 aaPredicted RBP8.59□□□□□ -1.03
TPM3-214ENST00000466010 PNPLA7Q6ZV29 1317 aa8.58□□□□□ -1.04
TPM3-214ENST00000466010 MYCP01106 439 aaPredicted RBP8.58□□□□□ -1.04
TPM3-214ENST00000466010 CANXP27824 592 aaKnown RBP8.58□□□□□ -1.04
TPM3-214ENST00000466010 WEE1P30291 646 aa8.58□□□□□ -1.04
TPM3-214ENST00000466010 FAM160A2Q8N612 972 aaPredicted RBP8.58□□□□□ -1.04
TPM3-214ENST00000466010 PIGBQ92521 554 aa8.58□□□□□ -1.04
TPM3-214ENST00000466010 COL26A1Q96A83 441 aa8.58□□□□□ -1.04
TPM3-214ENST00000466010 PDGFDQ9GZP0 370 aaPredicted RBP8.58□□□□□ -1.04
TPM3-214ENST00000466010 CDV3Q9UKY7 258 aaKnown RBP8.58□□□□□ -1.04
TPM3-214ENST00000466010 PCDHB11Q9Y5F2 797 aa8.58□□□□□ -1.04
TPM3-214ENST00000466010 LOC102724428A0A0B4J2F2 783 aa8.57□□□□□ -1.04
TPM3-214ENST00000466010 FAM13AO94988 1023 aa8.57□□□□□ -1.04
TPM3-214ENST00000466010 IL13P35225 146 aa8.57□□□□□ -1.04
TPM3-214ENST00000466010 SIK1P57059 783 aa8.57□□□□□ -1.04
TPM3-214ENST00000466010 ARHGAP4P98171 946 aa8.57□□□□□ -1.04
TPM3-214ENST00000466010 ERFEQ4G0M1 354 aa8.57□□□□□ -1.04
TPM3-214ENST00000466010 SULT6B1Q6IMI4 303 aa8.57□□□□□ -1.04
TPM3-214ENST00000466010 ZNF530Q6P9A1 599 aaPredicted RBP8.57□□□□□ -1.04
TPM3-214ENST00000466010 SH3RF1Q7Z6J0 888 aa8.57□□□□□ -1.04
TPM3-214ENST00000466010 HELQQ8TDG4 1101 aa8.57□□□□□ -1.04
TPM3-214ENST00000466010 UBXN4Q92575 508 aa8.57□□□□□ -1.04
TPM3-214ENST00000466010 SYT17Q9BSW7 474 aa8.57□□□□□ -1.04
TPM3-214ENST00000466010 FHDC1Q9C0D6 1143 aaPredicted RBP8.57□□□□□ -1.04
TPM3-214ENST00000466010 PRDM9Q9NQV7 894 aa8.57□□□□□ -1.04
TPM3-214ENST00000466010 C5P01031 1676 aa8.56□□□□□ -1.04
TPM3-214ENST00000466010 NDUFB5O43674 189 aa8.56□□□□□ -1.04
TPM3-214ENST00000466010 DIAPH1O60610 1272 aaKnown RBP8.56□□□□□ -1.04
TPM3-214ENST00000466010 MTHFSP49914 203 aa8.56□□□□□ -1.04
TPM3-214ENST00000466010 CABP4P57796 275 aa8.56□□□□□ -1.04
TPM3-214ENST00000466010 FKBP5Q13451 457 aaPredicted RBP8.56□□□□□ -1.04
TPM3-214ENST00000466010 NAALADL2Q58DX5 795 aa8.56□□□□□ -1.04
TPM3-214ENST00000466010 ADGRD1Q6QNK2 874 aa8.56□□□□□ -1.04
TPM3-214ENST00000466010 FAM177A1Q8N128 213 aaPredicted RBP8.56□□□□□ -1.04
TPM3-214ENST00000466010 BCAMP50895 628 aa8.55□□□□□ -1.04
TPM3-214ENST00000466010 EMP3P54852 163 aa8.55□□□□□ -1.04
TPM3-214ENST00000466010 KCNQ4P56696 695 aa8.55□□□□□ -1.04
TPM3-214ENST00000466010 TAGLNQ01995 201 aaKnown RBP8.55□□□□□ -1.04
TPM3-214ENST00000466010 AKAP4Q5JQC9 854 aa8.55□□□□□ -1.04
TPM3-214ENST00000466010 TSEN2Q8NCE0 465 aaKnown RBP8.55□□□□□ -1.04
TPM3-214ENST00000466010 VTI1AQ96AJ9 217 aa8.55□□□□□ -1.04
TPM3-214ENST00000466010 CFAP53Q96M91 514 aa8.55□□□□□ -1.04
TPM3-214ENST00000466010 PCDH10Q9P2E7 1040 aa8.55□□□□□ -1.04
TPM3-214ENST00000466010 C4BP0C0L5 1744 aa8.54□□□□□ -1.04
TPM3-214ENST00000466010 TOGARAM1Q9Y4F4 1720 aa8.54□□□□□ -1.04
TPM3-214ENST00000466010 ZNF831Q5JPB2 1677 aa8.54□□□□□ -1.04
TPM3-214ENST00000466010 ADH1BP00325 375 aa8.54□□□□□ -1.04
TPM3-214ENST00000466010 IGFBP4P22692 258 aa8.54□□□□□ -1.04
TPM3-214ENST00000466010 ERCC5P28715 1186 aaPredicted RBP8.54□□□□□ -1.04
TPM3-214ENST00000466010 MTMR3Q13615 1198 aa8.54□□□□□ -1.04
TPM3-214ENST00000466010 CC2D1BQ5T0F9 858 aaKnown RBP8.54□□□□□ -1.04
TPM3-214ENST00000466010 COL23A1Q86Y22 540 aaPredicted RBP8.54□□□□□ -1.04
TPM3-214ENST00000466010 RBCK1Q9BYM8 510 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms