RNA–Protein interactions for RNA: ENST00000465818.5

VPS8-218, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-218ENST00000465818 CCNYL3P0C7X3 344 aa9.8□□□□□ -0.84
VPS8-218ENST00000465818 USP17L24Q0WX57 530 aa9.8□□□□□ -0.84
VPS8-218ENST00000465818 PTK7Q13308 1070 aa9.8□□□□□ -0.84
VPS8-218ENST00000465818 NCOA4Q13772 614 aa9.8□□□□□ -0.84
VPS8-218ENST00000465818 KRT24Q2M2I5 525 aa9.8□□□□□ -0.84
VPS8-218ENST00000465818 ZNF790Q6PG37 636 aa9.8□□□□□ -0.84
VPS8-218ENST00000465818 FAM196AQ6ZSG2 479 aa9.8□□□□□ -0.84
VPS8-218ENST00000465818 TRMT2AQ8IZ69 625 aaKnown RBP9.8□□□□□ -0.84
VPS8-218ENST00000465818 BABAM1Q9NWV8 329 aa9.8□□□□□ -0.84
VPS8-218ENST00000465818 WBP1LQ9NX94 342 aa9.8□□□□□ -0.84
VPS8-218ENST00000465818 MKRN1Q9UHC7 482 aaKnown RBP9.8□□□□□ -0.84
VPS8-218ENST00000465818 TUBGCP6Q96RT7 1819 aa9.79□□□□□ -0.84
VPS8-218ENST00000465818 FAM196BA6NMK8 535 aa9.79□□□□□ -0.84
VPS8-218ENST00000465818 EXOSC9Q06265 439 aaKnown RBP9.79□□□□□ -0.84
VPS8-218ENST00000465818 KCNH2Q12809 1159 aa9.79□□□□□ -0.84
VPS8-218ENST00000465818 PDXDC2PQ6P474 469 aa9.79□□□□□ -0.84
VPS8-218ENST00000465818 TTC5Q8N0Z6 440 aa9.79□□□□□ -0.84
VPS8-218ENST00000465818 ASAP1Q9ULH1 1129 aa9.79□□□□□ -0.84
VPS8-218ENST00000465818 MYH14Q7Z406 1995 aaKnown RBP9.79□□□□□ -0.84
VPS8-218ENST00000465818 NUP188Q5SRE5 1749 aa9.79□□□□□ -0.84
VPS8-218ENST00000465818 N4BP2Q86UW6 1770 aaPredicted RBP9.78□□□□□ -0.84
VPS8-218ENST00000465818 HEG1Q9ULI3 1381 aa9.78□□□□□ -0.84
VPS8-218ENST00000465818 TRIM37O94972 964 aa9.78□□□□□ -0.84
VPS8-218ENST00000465818 RBM25P49756 843 aaKnown RBP9.78□□□□□ -0.84
VPS8-218ENST00000465818 EIF4A1P60842 406 aaKnown RBP9.78□□□□□ -0.84
VPS8-218ENST00000465818 PTCRAQ6ISU1 281 aaPredicted RBP9.78□□□□□ -0.84
VPS8-218ENST00000465818 TRAF7Q6Q0C0 670 aa9.78□□□□□ -0.84
VPS8-218ENST00000465818 ZNF496Q96IT1 587 aaPredicted RBP9.78□□□□□ -0.84
VPS8-218ENST00000465818 NUDT12Q9BQG2 462 aa9.78□□□□□ -0.84
VPS8-218ENST00000465818 ATG3Q9NT62 314 aa9.78□□□□□ -0.84
VPS8-218ENST00000465818 GPSM3Q9Y4H4 160 aa9.78□□□□□ -0.84
VPS8-218ENST00000465818 C4BP0C0L5 1744 aa9.78□□□□□ -0.84
VPS8-218ENST00000465818 C4AP0C0L4 1744 aa9.77□□□□□ -0.85
VPS8-218ENST00000465818 PTCD1O75127 700 aaKnown RBP9.77□□□□□ -0.85
VPS8-218ENST00000465818 SSFA2P28290 1259 aa9.77□□□□□ -0.85
VPS8-218ENST00000465818 TSPYL6Q8N831 410 aa9.77□□□□□ -0.85
VPS8-218ENST00000465818 C8orf58Q8NAV2 365 aa9.77□□□□□ -0.85
VPS8-218ENST00000465818 WNT2BQ93097 391 aa9.77□□□□□ -0.85
VPS8-218ENST00000465818 SPSB2Q99619 263 aa9.77□□□□□ -0.85
VPS8-218ENST00000465818 UBR3Q6ZT12 1888 aa9.76□□□□□ -0.85
VPS8-218ENST00000465818 ARFGEF2Q9Y6D5 1785 aa9.76□□□□□ -0.85
VPS8-218ENST00000465818 ELL2O00472 640 aaPredicted RBP9.76□□□□□ -0.85
VPS8-218ENST00000465818 TLL1O43897 1013 aa9.76□□□□□ -0.85
VPS8-218ENST00000465818 DKK1O94907 266 aa9.76□□□□□ -0.85
VPS8-218ENST00000465818 CENPBP07199 599 aaPredicted RBP9.76□□□□□ -0.85
VPS8-218ENST00000465818 SCNN1AP37088 669 aa9.76□□□□□ -0.85
VPS8-218ENST00000465818 TWISTNBQ3B726 338 aaPredicted RBP9.76□□□□□ -0.85
VPS8-218ENST00000465818 PLPP7Q8NBV4 271 aa9.76□□□□□ -0.85
VPS8-218ENST00000465818 ADAM32Q8TC27 787 aa9.76□□□□□ -0.85
VPS8-218ENST00000465818 FMNL2Q96PY5 1086 aa9.76□□□□□ -0.85
VPS8-218ENST00000465818 PCDHB9Q9Y5E1 797 aa9.76□□□□□ -0.85
VPS8-218ENST00000465818 BCORQ6W2J9 1755 aa9.75□□□□□ -0.85
VPS8-218ENST00000465818 SCN7AQ01118 1682 aa9.75□□□□□ -0.85
VPS8-218ENST00000465818 PRAMEF22A3QJZ6 481 aa9.75□□□□□ -0.85
VPS8-218ENST00000465818 COPS2P61201 443 aa9.75□□□□□ -0.85
VPS8-218ENST00000465818 CLDN10P78369 228 aa9.75□□□□□ -0.85
VPS8-218ENST00000465818 PTK2Q05397 1052 aa9.75□□□□□ -0.85
VPS8-218ENST00000465818 SH3BP5LQ7L8J4 393 aa9.75□□□□□ -0.85
VPS8-218ENST00000465818 SMARCC1Q92922 1105 aaPredicted RBP9.75□□□□□ -0.85
VPS8-218ENST00000465818 ANKRD36CQ5JPF3 1778 aa9.74□□□□□ -0.85
VPS8-218ENST00000465818 LOC102724428A0A0B4J2F2 783 aa9.74□□□□□ -0.85
VPS8-218ENST00000465818 GIGYF1O75420 1035 aaPredicted RBP9.74□□□□□ -0.85
VPS8-218ENST00000465818 HOXB7P09629 217 aa9.74□□□□□ -0.85
VPS8-218ENST00000465818 SIK1P57059 783 aa9.74□□□□□ -0.85
VPS8-218ENST00000465818 ANKRD13DQ6ZTN6 518 aa9.74□□□□□ -0.85
VPS8-218ENST00000465818 RNF135Q8IUD6 432 aa9.74□□□□□ -0.85
VPS8-218ENST00000465818 GPKOWQ92917 476 aaPredicted RBP eCLIP9.74□□□□□ -0.85
VPS8-218ENST00000465818 SLC4A9Q96Q91 983 aa9.74□□□□□ -0.85
VPS8-218ENST00000465818 SOS1Q07889 1333 aaPredicted RBP9.74□□□□□ -0.85
VPS8-218ENST00000465818 QSER1Q2KHR3 1735 aa9.73□□□□□ -0.85
VPS8-218ENST00000465818 AFDNP55196 1824 aaKnown RBP9.73□□□□□ -0.85
VPS8-218ENST00000465818 VAMP4O75379 141 aa9.73□□□□□ -0.85
VPS8-218ENST00000465818 SNRPA1P09661 255 aaKnown RBP9.73□□□□□ -0.85
VPS8-218ENST00000465818 CT47B1P0C2W7 299 aaPredicted RBP9.73□□□□□ -0.85
VPS8-218ENST00000465818 RASA1P20936 1047 aa9.73□□□□□ -0.85
VPS8-218ENST00000465818 SLFNL1Q499Z3 407 aa9.73□□□□□ -0.85
VPS8-218ENST00000465818 NOM1Q5C9Z4 860 aaKnown RBP9.73□□□□□ -0.85
VPS8-218ENST00000465818 DNAJC10Q8IXB1 793 aa9.73□□□□□ -0.85
VPS8-218ENST00000465818 FAM163AQ96GL9 167 aaPredicted RBP9.73□□□□□ -0.85
VPS8-218ENST00000465818 CCDC85AQ96PX6 553 aaPredicted RBP9.73□□□□□ -0.85
VPS8-218ENST00000465818 BCL2L13Q9BXK5 485 aa9.73□□□□□ -0.85
VPS8-218ENST00000465818 RCAN3Q9UKA8 241 aa9.73□□□□□ -0.85
VPS8-218ENST00000465818 KIAA1024Q9UPX6 916 aa9.73□□□□□ -0.85
VPS8-218ENST00000465818 GOLGA8CPA6NN73 597 aa9.72□□□□□ -0.85
VPS8-218ENST00000465818 TCERG1O14776 1098 aaKnown RBP9.72□□□□□ -0.85
VPS8-218ENST00000465818 KCNQ4P56696 695 aa9.72□□□□□ -0.85
VPS8-218ENST00000465818 ITPK1Q13572 414 aa9.72□□□□□ -0.85
VPS8-218ENST00000465818 ANKMY2Q8IV38 441 aa9.72□□□□□ -0.85
VPS8-218ENST00000465818 CLP1Q92989 425 aaKnown RBP9.72□□□□□ -0.85
VPS8-218ENST00000465818 UNC93B1Q9H1C4 597 aa9.72□□□□□ -0.85
VPS8-218ENST00000465818 SMC4Q9NTJ3 1288 aa9.72□□□□□ -0.85
VPS8-218ENST00000465818 CCNL1Q9UK58 526 aaPredicted RBP9.72□□□□□ -0.85
VPS8-218ENST00000465818 ATP5J2-PTCD1G3V325 749 aa9.71□□□□□ -0.86
VPS8-218ENST00000465818 ZBTB7BO15156 539 aaPredicted RBP9.71□□□□□ -0.86
VPS8-218ENST00000465818 APBA3O96018 575 aa9.71□□□□□ -0.86
VPS8-218ENST00000465818 EIF2S2P20042 333 aaKnown RBP9.71□□□□□ -0.86
VPS8-218ENST00000465818 RARSP54136 660 aaKnown RBP9.71□□□□□ -0.86
VPS8-218ENST00000465818 SH3RF1Q7Z6J0 888 aa9.71□□□□□ -0.86
VPS8-218ENST00000465818 ARMC2Q8NEN0 867 aa9.71□□□□□ -0.86
VPS8-218ENST00000465818 SSH1Q8WYL5 1049 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms