RNA–Protein interactions for RNA: ENST00000465768.1

SAMM50-202, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 169 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-202ENST00000465768 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.45□□□□□ -1.38
SAMM50-202ENST00000465768 PHACTR2O75167 634 aa6.45□□□□□ -1.38
SAMM50-202ENST00000465768 TRAPPC3LQ5T215 181 aa6.45□□□□□ -1.38
SAMM50-202ENST00000465768 ALG1LQ6GMV1 187 aa6.45□□□□□ -1.38
SAMM50-202ENST00000465768 BHMTQ93088 406 aa6.45□□□□□ -1.38
SAMM50-202ENST00000465768 UBE2OQ9C0C9 1292 aaKnown RBP6.45□□□□□ -1.38
SAMM50-202ENST00000465768 SASH3O75995 380 aa6.44□□□□□ -1.38
SAMM50-202ENST00000465768 MAP3K6O95382 1288 aa6.44□□□□□ -1.38
SAMM50-202ENST00000465768 RARAP10276 462 aa6.44□□□□□ -1.38
SAMM50-202ENST00000465768 HOXD8P13378 290 aaPredicted RBP6.44□□□□□ -1.38
SAMM50-202ENST00000465768 VAMP1P23763 118 aa6.44□□□□□ -1.38
SAMM50-202ENST00000465768 SOX18P35713 384 aa6.44□□□□□ -1.38
SAMM50-202ENST00000465768 LRP8Q14114 963 aa6.44□□□□□ -1.38
SAMM50-202ENST00000465768 NBPF11Q86T75 865 aa6.44□□□□□ -1.38
SAMM50-202ENST00000465768 OR13H1Q8NG92 308 aa6.44□□□□□ -1.38
SAMM50-202ENST00000465768 LENG1Q96BZ8 264 aaPredicted RBP6.44□□□□□ -1.38
SAMM50-202ENST00000465768 ZFYVE28Q9HCC9 887 aa6.44□□□□□ -1.38
SAMM50-202ENST00000465768 JPH1Q9HDC5 661 aaPredicted RBP6.44□□□□□ -1.38
SAMM50-202ENST00000465768 CNTN3Q9P232 1028 aa6.44□□□□□ -1.38
SAMM50-202ENST00000465768 ZFATQ9P243 1243 aa6.44□□□□□ -1.38
SAMM50-202ENST00000465768 SLC6A14Q9UN76 642 aa6.44□□□□□ -1.38
SAMM50-202ENST00000465768 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.44□□□□□ -1.38
SAMM50-202ENST00000465768 NFKB1P19838 968 aa6.43□□□□□ -1.38
SAMM50-202ENST00000465768 TARSP26639 723 aaKnown RBP6.43□□□□□ -1.38
SAMM50-202ENST00000465768 TBC1D8BQ0IIM8 1120 aa6.43□□□□□ -1.38
SAMM50-202ENST00000465768 KRT25Q7Z3Z0 450 aa6.43□□□□□ -1.38
SAMM50-202ENST00000465768 C1orf127Q8N9H9 656 aa6.43□□□□□ -1.38
SAMM50-202ENST00000465768 PMEPA1Q969W9 287 aa6.43□□□□□ -1.38
SAMM50-202ENST00000465768 MRRFQ96E11 262 aaKnown RBP6.43□□□□□ -1.38
SAMM50-202ENST00000465768 PNMA5Q96PV4 448 aa6.43□□□□□ -1.38
SAMM50-202ENST00000465768 SETDB2Q96T68 719 aa6.43□□□□□ -1.38
SAMM50-202ENST00000465768 KIAA1522Q9P206 1035 aaPredicted RBP6.43□□□□□ -1.38
SAMM50-202ENST00000465768 WWC3Q9ULE0 1092 aa6.43□□□□□ -1.38
SAMM50-202ENST00000465768 KRTAP9-6A0A140TA67 174 aa6.42□□□□□ -1.38
SAMM50-202ENST00000465768 MMP20O60882 483 aa6.42□□□□□ -1.38
SAMM50-202ENST00000465768 SELPP16109 830 aa6.42□□□□□ -1.38
SAMM50-202ENST00000465768 TTC39BQ5VTQ0 682 aaPredicted RBP6.42□□□□□ -1.38
SAMM50-202ENST00000465768 USPL1Q5W0Q7 1092 aa6.42□□□□□ -1.38
SAMM50-202ENST00000465768 DUSP9Q99956 384 aaKnown RBP6.42□□□□□ -1.38
SAMM50-202ENST00000465768 BCL11AQ9H165 835 aa6.42□□□□□ -1.38
SAMM50-202ENST00000465768 E9PSI1 815 aa6.41□□□□□ -1.38
SAMM50-202ENST00000465768 EREGO14944 169 aa6.41□□□□□ -1.38
SAMM50-202ENST00000465768 GNA15P30679 374 aa6.41□□□□□ -1.38
SAMM50-202ENST00000465768 MRPL58Q14197 206 aaKnown RBP6.41□□□□□ -1.38
SAMM50-202ENST00000465768 TMC4Q7Z404 712 aa6.41□□□□□ -1.38
SAMM50-202ENST00000465768 GALNT12Q8IXK2 581 aa6.41□□□□□ -1.38
SAMM50-202ENST00000465768 FMR1NBQ8N0W7 255 aaPredicted RBP6.41□□□□□ -1.38
SAMM50-202ENST00000465768 CCDC74AQ96AQ1 378 aa6.41□□□□□ -1.38
SAMM50-202ENST00000465768 FRMD6Q96NE9 622 aa6.41□□□□□ -1.38
SAMM50-202ENST00000465768 TLR7Q9NYK1 1049 aaKnown RBP6.41□□□□□ -1.38
SAMM50-202ENST00000465768 PARP2Q9UGN5 583 aa6.41□□□□□ -1.38
SAMM50-202ENST00000465768 KIF4AO95239 1232 aa6.4□□□□□ -1.38
SAMM50-202ENST00000465768 CYP2E1P05181 493 aaPredicted RBP6.4□□□□□ -1.38
SAMM50-202ENST00000465768 PSAPP07602 524 aa6.4□□□□□ -1.38
SAMM50-202ENST00000465768 CES1P23141 567 aa6.4□□□□□ -1.38
SAMM50-202ENST00000465768 ITGAEP38570 1179 aa6.4□□□□□ -1.38
SAMM50-202ENST00000465768 NRLP54845 237 aa6.4□□□□□ -1.38
SAMM50-202ENST00000465768 DAB2P98082 770 aa6.4□□□□□ -1.38
SAMM50-202ENST00000465768 PCSK7Q16549 785 aa6.4□□□□□ -1.38
SAMM50-202ENST00000465768 DHX32Q7L7V1 743 aaKnown RBP6.4□□□□□ -1.38
SAMM50-202ENST00000465768 DTWD1Q8N5C7 304 aa6.4□□□□□ -1.38
SAMM50-202ENST00000465768 NPHS2Q9NP85 383 aa6.4□□□□□ -1.38
SAMM50-202ENST00000465768 USP21Q9UK80 565 aa6.4□□□□□ -1.38
SAMM50-202ENST00000465768 RECKO95980 971 aa6.39□□□□□ -1.39
SAMM50-202ENST00000465768 AFF1P51825 1210 aaKnown RBP6.39□□□□□ -1.39
SAMM50-202ENST00000465768 GPLD1P80108 840 aa6.39□□□□□ -1.39
SAMM50-202ENST00000465768 XPCQ01831 940 aaPredicted RBP6.39□□□□□ -1.39
SAMM50-202ENST00000465768 PLAURQ03405 335 aa6.39□□□□□ -1.39
SAMM50-202ENST00000465768 PSAPL1Q6NUJ1 521 aa6.39□□□□□ -1.39
SAMM50-202ENST00000465768 TP53INP1Q96A56 240 aa6.39□□□□□ -1.39
SAMM50-202ENST00000465768 RNF19AQ9NV58 838 aa6.39□□□□□ -1.39
SAMM50-202ENST00000465768 DNAJB12Q9NXW2 375 aaKnown RBP6.39□□□□□ -1.39
SAMM50-202ENST00000465768 KANSL3Q9P2N6 904 aa6.39□□□□□ -1.39
SAMM50-202ENST00000465768 SALL4Q9UJQ4 1053 aa6.39□□□□□ -1.39
SAMM50-202ENST00000465768 NAGPAQ9UK23 515 aa6.39□□□□□ -1.39
SAMM50-202ENST00000465768 POLR3DP05423 398 aaPredicted RBP6.38□□□□□ -1.39
SAMM50-202ENST00000465768 EDN3P14138 238 aa6.38□□□□□ -1.39
SAMM50-202ENST00000465768 RANGAP1P46060 587 aaPredicted RBP6.38□□□□□ -1.39
SAMM50-202ENST00000465768 HYAL2Q12891 473 aa6.38□□□□□ -1.39
SAMM50-202ENST00000465768 PSMD2Q13200 908 aa6.38□□□□□ -1.39
SAMM50-202ENST00000465768 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.38□□□□□ -1.39
SAMM50-202ENST00000465768 TRPM4Q8TD43 1214 aa6.38□□□□□ -1.39
SAMM50-202ENST00000465768 NUDT8Q8WV74 236 aa6.38□□□□□ -1.39
SAMM50-202ENST00000465768 SSBP4Q9BWG4 385 aaPredicted RBP6.38□□□□□ -1.39
SAMM50-202ENST00000465768 FRRS1LQ9P0K9 344 aa6.38□□□□□ -1.39
SAMM50-202ENST00000465768 SPG7Q9UQ90 795 aa6.38□□□□□ -1.39
SAMM50-202ENST00000465768 GIPC1O14908 333 aa6.37□□□□□ -1.39
SAMM50-202ENST00000465768 SORBS3O60504 671 aa6.37□□□□□ -1.39
SAMM50-202ENST00000465768 RGS9O75916 674 aaPredicted RBP6.37□□□□□ -1.39
SAMM50-202ENST00000465768 COL13A1Q5TAT6 717 aaPredicted RBP6.37□□□□□ -1.39
SAMM50-202ENST00000465768 KIAA0319Q5VV43 1072 aa6.37□□□□□ -1.39
SAMM50-202ENST00000465768 PEAR1Q5VY43 1037 aaPredicted RBP6.37□□□□□ -1.39
SAMM50-202ENST00000465768 SHISA2Q6UWI4 295 aa6.37□□□□□ -1.39
SAMM50-202ENST00000465768 PI16Q6UXB8 463 aa6.37□□□□□ -1.39
SAMM50-202ENST00000465768 ILDR2Q71H61 639 aa6.37□□□□□ -1.39
SAMM50-202ENST00000465768 EPS8L3Q8TE67 593 aaKnown RBP6.37□□□□□ -1.39
SAMM50-202ENST00000465768 IGFLR1Q9H665 355 aa6.37□□□□□ -1.39
SAMM50-202ENST00000465768 NLRP2Q9NX02 1062 aa6.37□□□□□ -1.39
SAMM50-202ENST00000465768 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.37□□□□□ -1.39
SAMM50-202ENST00000465768 MSL1Q68DK7 614 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms