RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 ANKRD24Q8TF21 1146 aa7.62□□□□□ -1.19
CMTM1-207ENST00000465057 OSBPL3Q9H4L5 887 aa7.62□□□□□ -1.19
CMTM1-207ENST00000465057 NLRP2Q9NX02 1062 aa7.62□□□□□ -1.19
CMTM1-207ENST00000465057 NINLQ9Y2I6 1382 aa7.61□□□□□ -1.19
CMTM1-207ENST00000465057 ST20-MTHFSA0A0A6YYL1 179 aa7.61□□□□□ -1.19
CMTM1-207ENST00000465057 A0A1W2PRU2 124 aa7.61□□□□□ -1.19
CMTM1-207ENST00000465057 SLC35F4A4IF30 521 aa7.61□□□□□ -1.19
CMTM1-207ENST00000465057 FBLN1P23142 703 aa7.61□□□□□ -1.19
CMTM1-207ENST00000465057 TXNRD1Q16881 649 aa7.61□□□□□ -1.19
CMTM1-207ENST00000465057 LTV1Q96GA3 475 aaPredicted RBP7.61□□□□□ -1.19
CMTM1-207ENST00000465057 TESK2Q96S53 571 aa7.61□□□□□ -1.19
CMTM1-207ENST00000465057 SPON1Q9HCB6 807 aa7.61□□□□□ -1.19
CMTM1-207ENST00000465057 PPP1R1BQ9UD71 204 aaPredicted RBP7.61□□□□□ -1.19
CMTM1-207ENST00000465057 ZBTB7AO95365 584 aa7.6□□□□□ -1.19
CMTM1-207ENST00000465057 IL2RBP14784 551 aa7.6□□□□□ -1.19
CMTM1-207ENST00000465057 GPC1P35052 558 aa7.6□□□□□ -1.19
CMTM1-207ENST00000465057 SOX11P35716 441 aa7.6□□□□□ -1.19
CMTM1-207ENST00000465057 INSM1Q01101 510 aaPredicted RBP7.6□□□□□ -1.19
CMTM1-207ENST00000465057 TSGA10IPQ3SY00 556 aa7.6□□□□□ -1.19
CMTM1-207ENST00000465057 SLFNL1Q499Z3 407 aa7.6□□□□□ -1.19
CMTM1-207ENST00000465057 CDCA8Q53HL2 280 aa7.6□□□□□ -1.19
CMTM1-207ENST00000465057 TERF2IPQ9NYB0 399 aa7.6□□□□□ -1.19
CMTM1-207ENST00000465057 MEGF6O75095 1541 aa7.6□□□□□ -1.19
CMTM1-207ENST00000465057 CHD4Q14839 1912 aa7.6□□□□□ -1.19
CMTM1-207ENST00000465057 MAP2P11137 1827 aaKnown RBP7.59□□□□□ -1.19
CMTM1-207ENST00000465057 ITGB4P16144 1822 aa7.59□□□□□ -1.19
CMTM1-207ENST00000465057 TOGARAM1Q9Y4F4 1720 aa7.59□□□□□ -1.19
CMTM1-207ENST00000465057 SEMA3FQ13275 785 aa7.59□□□□□ -1.19
CMTM1-207ENST00000465057 ERICH6BQ5W0A0 696 aa7.59□□□□□ -1.19
CMTM1-207ENST00000465057 LYSMD3Q7Z3D4 306 aa7.59□□□□□ -1.19
CMTM1-207ENST00000465057 RNF135Q8IUD6 432 aa7.59□□□□□ -1.19
CMTM1-207ENST00000465057 CCDC155Q8N6L0 562 aa7.59□□□□□ -1.19
CMTM1-207ENST00000465057 POM121Q96HA1 1249 aa7.59□□□□□ -1.19
CMTM1-207ENST00000465057 TAF1LQ8IZX4 1826 aa7.59□□□□□ -1.19
CMTM1-207ENST00000465057 ANKRD36BQ8N2N9 1353 aa7.59□□□□□ -1.2
CMTM1-207ENST00000465057 USP47Q96K76 1375 aa7.59□□□□□ -1.2
CMTM1-207ENST00000465057 COL24A1Q17RW2 1714 aa7.58□□□□□ -1.2
CMTM1-207ENST00000465057 ANKRD26Q9UPS8 1709 aa7.58□□□□□ -1.2
CMTM1-207ENST00000465057 MAP3K19Q56UN5 1328 aa7.58□□□□□ -1.2
CMTM1-207ENST00000465057 C5P01031 1676 aa7.58□□□□□ -1.2
CMTM1-207ENST00000465057 MEN1O00255 615 aa7.58□□□□□ -1.2
CMTM1-207ENST00000465057 MYCP01106 439 aaPredicted RBP7.58□□□□□ -1.2
CMTM1-207ENST00000465057 SLC15A2Q16348 729 aa7.58□□□□□ -1.2
CMTM1-207ENST00000465057 IP6K1Q92551 441 aa7.58□□□□□ -1.2
CMTM1-207ENST00000465057 COG3Q96JB2 828 aa7.58□□□□□ -1.2
CMTM1-207ENST00000465057 STK32BQ9NY57 414 aa7.58□□□□□ -1.2
CMTM1-207ENST00000465057 DOLKQ9UPQ8 538 aa7.58□□□□□ -1.2
CMTM1-207ENST00000465057 SENP3-EIF4A1A0A087X0R7 540 aa7.57□□□□□ -1.2
CMTM1-207ENST00000465057 RAD21O60216 631 aa7.57□□□□□ -1.2
CMTM1-207ENST00000465057 GNRH1P01148 92 aa7.57□□□□□ -1.2
CMTM1-207ENST00000465057 HOXC9P31274 260 aa7.57□□□□□ -1.2
CMTM1-207ENST00000465057 USP4Q13107 963 aa7.57□□□□□ -1.2
CMTM1-207ENST00000465057 CLN3Q13286 438 aa7.57□□□□□ -1.2
CMTM1-207ENST00000465057 RRS1Q15050 365 aaKnown RBP7.57□□□□□ -1.2
CMTM1-207ENST00000465057 ZNF827Q17R98 1081 aa7.57□□□□□ -1.2
CMTM1-207ENST00000465057 WWC1Q8IX03 1113 aa7.57□□□□□ -1.2
CMTM1-207ENST00000465057 DDX54Q8TDD1 881 aaKnown RBP7.57□□□□□ -1.2
CMTM1-207ENST00000465057 NANOS1Q8WY41 292 aaKnown RBP7.57□□□□□ -1.2
CMTM1-207ENST00000465057 NLRP3Q96P20 1036 aa7.57□□□□□ -1.2
CMTM1-207ENST00000465057 GGNBP2Q9H3C7 697 aa7.57□□□□□ -1.2
CMTM1-207ENST00000465057 PKD1L3Q7Z443 1732 aa7.57□□□□□ -1.2
CMTM1-207ENST00000465057 FANCIQ9NVI1 1328 aa7.56□□□□□ -1.2
CMTM1-207ENST00000465057 YY1P25490 414 aa7.56□□□□□ -1.2
CMTM1-207ENST00000465057 AMPHP49418 695 aa7.56□□□□□ -1.2
CMTM1-207ENST00000465057 PRICKLE2Q7Z3G6 844 aa7.56□□□□□ -1.2
CMTM1-207ENST00000465057 USHBP1Q8N6Y0 703 aa7.56□□□□□ -1.2
CMTM1-207ENST00000465057 ARHGEF10LQ9HCE6 1279 aa7.56□□□□□ -1.2
CMTM1-207ENST00000465057 LRRC4BQ9NT99 713 aa7.56□□□□□ -1.2
CMTM1-207ENST00000465057 RBM19Q9Y4C8 960 aaKnown RBP7.56□□□□□ -1.2
CMTM1-207ENST00000465057 RTL1A6NKG5 1358 aa7.56□□□□□ -1.2
CMTM1-207ENST00000465057 NSD2O96028 1365 aa7.56□□□□□ -1.2
CMTM1-207ENST00000465057 ITGA6P23229 1130 aa7.55□□□□□ -1.2
CMTM1-207ENST00000465057 KCNQ4P56696 695 aa7.55□□□□□ -1.2
CMTM1-207ENST00000465057 TMF1P82094 1093 aa7.55□□□□□ -1.2
CMTM1-207ENST00000465057 MAP7D1Q3KQU3 841 aa7.55□□□□□ -1.2
CMTM1-207ENST00000465057 SYTL4Q96C24 671 aaPredicted RBP7.55□□□□□ -1.2
CMTM1-207ENST00000465057 GRIP2Q9C0E4 1043 aa7.55□□□□□ -1.2
CMTM1-207ENST00000465057 ALG2Q9H553 416 aa7.55□□□□□ -1.2
CMTM1-207ENST00000465057 SMG6Q86US8 1419 aaKnown RBP7.54□□□□□ -1.2
CMTM1-207ENST00000465057 NSD3Q9BZ95 1437 aa7.54□□□□□ -1.2
CMTM1-207ENST00000465057 FYB1O15117 783 aa7.54□□□□□ -1.2
CMTM1-207ENST00000465057 SLC27A3Q5K4L6 730 aa7.54□□□□□ -1.2
CMTM1-207ENST00000465057 GPR161Q8N6U8 529 aaKnown RBP7.54□□□□□ -1.2
CMTM1-207ENST00000465057 PLPP7Q8NBV4 271 aa7.54□□□□□ -1.2
CMTM1-207ENST00000465057 ESYT1Q9BSJ8 1104 aa7.54□□□□□ -1.2
CMTM1-207ENST00000465057 FHDC1Q9C0D6 1143 aaPredicted RBP7.54□□□□□ -1.2
CMTM1-207ENST00000465057 MTFR1LQ9H019 292 aa7.54□□□□□ -1.2
CMTM1-207ENST00000465057 STK17AQ9UEE5 414 aa7.54□□□□□ -1.2
CMTM1-207ENST00000465057 IL2RAP01589 272 aa7.53□□□□□ -1.2
CMTM1-207ENST00000465057 RHOQP17081 205 aa7.53□□□□□ -1.2
CMTM1-207ENST00000465057 LORP23490 312 aaPredicted RBP7.53□□□□□ -1.2
CMTM1-207ENST00000465057 HSP90AB2PQ58FF8 381 aa7.53□□□□□ -1.2
CMTM1-207ENST00000465057 OXLD1Q5BKU9 147 aa7.53□□□□□ -1.2
CMTM1-207ENST00000465057 NBPF6Q5VWK0 638 aa7.53□□□□□ -1.2
CMTM1-207ENST00000465057 CNKSR1Q969H4 720 aa7.53□□□□□ -1.2
CMTM1-207ENST00000465057 XAGE2Q96GT9 111 aa7.53□□□□□ -1.2
CMTM1-207ENST00000465057 NBPF4Q96M43 638 aa7.53□□□□□ -1.2
CMTM1-207ENST00000465057 RAB6BQ9NRW1 208 aa7.53□□□□□ -1.2
CMTM1-207ENST00000465057 HRH3Q9Y5N1 445 aa7.53□□□□□ -1.2
CMTM1-207ENST00000465057 UBR3Q6ZT12 1888 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms