RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 SH2B1Q9NRF2 756 aaPredicted RBP25.95■■□□□ 1.75
PDLIM2-216ENST00000464275 CCNL1Q9UK58 526 aaPredicted RBP25.95■■□□□ 1.75
PDLIM2-216ENST00000464275 SEC31BQ9NQW1 1179 aa25.95■■□□□ 1.74
PDLIM2-216ENST00000464275 NARFQ9UHQ1 456 aa25.95■■□□□ 1.74
PDLIM2-216ENST00000464275 XRCC6P12956 609 aaKnown RBP eCLIP25.94■■□□□ 1.74
PDLIM2-216ENST00000464275 IGHMBP2P38935 993 aaKnown RBP25.94■■□□□ 1.74
PDLIM2-216ENST00000464275 FAM182BQ5T319 152 aa25.94■■□□□ 1.74
PDLIM2-216ENST00000464275 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.94■■□□□ 1.74
PDLIM2-216ENST00000464275 MAST3O60307 1309 aa25.94■■□□□ 1.74
PDLIM2-216ENST00000464275 UQCRFS1P1P0C7P4 283 aa25.93■■□□□ 1.74
PDLIM2-216ENST00000464275 RPS6KB1P23443 525 aa25.93■■□□□ 1.74
PDLIM2-216ENST00000464275 C4AP0C0L4 1744 aa25.93■■□□□ 1.74
PDLIM2-216ENST00000464275 C4BP0C0L5 1744 aa25.93■■□□□ 1.74
PDLIM2-216ENST00000464275 DOCK2Q92608 1830 aa25.93■■□□□ 1.74
PDLIM2-216ENST00000464275 MCAMP43121 646 aa25.93■■□□□ 1.74
PDLIM2-216ENST00000464275 ANKRD1Q15327 319 aa25.93■■□□□ 1.74
PDLIM2-216ENST00000464275 BRD1O95696 1058 aa25.92■■□□□ 1.74
PDLIM2-216ENST00000464275 SLC5A1P13866 664 aa25.92■■□□□ 1.74
PDLIM2-216ENST00000464275 ARID4AP29374 1257 aaPredicted RBP25.92■■□□□ 1.74
PDLIM2-216ENST00000464275 SLFNL1Q499Z3 407 aa25.92■■□□□ 1.74
PDLIM2-216ENST00000464275 TAF1P21675 1872 aa25.92■■□□□ 1.74
PDLIM2-216ENST00000464275 TTF1Q15361 905 aaPredicted RBP25.91■■□□□ 1.74
PDLIM2-216ENST00000464275 GZF1Q9H116 711 aaPredicted RBP25.91■■□□□ 1.74
PDLIM2-216ENST00000464275 TAF6LQ9Y6J9 622 aa25.91■■□□□ 1.74
PDLIM2-216ENST00000464275 CCDC102BQ68D86 513 aa25.91■■□□□ 1.74
PDLIM2-216ENST00000464275 SEPT12Q8IYM1 358 aa25.91■■□□□ 1.74
PDLIM2-216ENST00000464275 BCL2L12Q9HB09 334 aa25.91■■□□□ 1.74
PDLIM2-216ENST00000464275 M0R2C6 588 aa25.9■■□□□ 1.74
PDLIM2-216ENST00000464275 GNPATO15228 680 aa25.9■■□□□ 1.74
PDLIM2-216ENST00000464275 CYP21A2P08686 494 aa25.9■■□□□ 1.74
PDLIM2-216ENST00000464275 ERFEQ4G0M1 354 aa25.9■■□□□ 1.74
PDLIM2-216ENST00000464275 ZSCAN25Q6NSZ9 544 aa25.9■■□□□ 1.74
PDLIM2-216ENST00000464275 HELBQ8NG08 1087 aaPredicted RBP25.9■■□□□ 1.74
PDLIM2-216ENST00000464275 LARP6Q9BRS8 491 aaKnown RBP25.9■■□□□ 1.74
PDLIM2-216ENST00000464275 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.9■■□□□ 1.74
PDLIM2-216ENST00000464275 HSPD1P10809 573 aaKnown RBP25.89■■□□□ 1.74
PDLIM2-216ENST00000464275 SF3B3Q15393 1217 aaKnown RBP25.89■■□□□ 1.74
PDLIM2-216ENST00000464275 TBC1D9BQ66K14 1250 aa25.89■■□□□ 1.74
PDLIM2-216ENST00000464275 OSBP2Q969R2 916 aa25.89■■□□□ 1.74
PDLIM2-216ENST00000464275 NEK1Q96PY6 1258 aa25.89■■□□□ 1.74
PDLIM2-216ENST00000464275 CDC5LQ99459 802 aaKnown RBP25.89■■□□□ 1.74
PDLIM2-216ENST00000464275 RTCBQ9Y3I0 505 aaKnown RBP25.89■■□□□ 1.74
PDLIM2-216ENST00000464275 LARGE1O95461 756 aa25.89■■□□□ 1.73
PDLIM2-216ENST00000464275 APPBP2Q92624 585 aa25.89■■□□□ 1.73
PDLIM2-216ENST00000464275 BRWD3Q6RI45 1802 aa25.88■■□□□ 1.73
PDLIM2-216ENST00000464275 ZPR1O75312 459 aa25.88■■□□□ 1.73
PDLIM2-216ENST00000464275 PHKA1P46020 1223 aa25.88■■□□□ 1.73
PDLIM2-216ENST00000464275 SLC10A5Q5PT55 438 aa25.88■■□□□ 1.73
PDLIM2-216ENST00000464275 PI16Q6UXB8 463 aa25.88■■□□□ 1.73
PDLIM2-216ENST00000464275 NYXQ9GZU5 481 aa25.88■■□□□ 1.73
PDLIM2-216ENST00000464275 WASHC4Q2M389 1173 aa25.87■■□□□ 1.73
PDLIM2-216ENST00000464275 GRPEL1Q9HAV7 217 aa25.87■■□□□ 1.73
PDLIM2-216ENST00000464275 SMC3Q9UQE7 1217 aa25.87■■□□□ 1.73
PDLIM2-216ENST00000464275 MCTP1Q6DN14 999 aa25.87■■□□□ 1.73
PDLIM2-216ENST00000464275 TCHHQ07283 1943 aa25.86■■□□□ 1.73
PDLIM2-216ENST00000464275 ME3Q16798 604 aa25.86■■□□□ 1.73
PDLIM2-216ENST00000464275 BICDL1Q6ZP65 573 aa25.86■■□□□ 1.73
PDLIM2-216ENST00000464275 CCDC83Q8IWF9 413 aa25.86■■□□□ 1.73
PDLIM2-216ENST00000464275 TPCN1Q9ULQ1 816 aa25.86■■□□□ 1.73
PDLIM2-216ENST00000464275 WDR33Q9C0J8 1336 aaKnown RBP25.86■■□□□ 1.73
PDLIM2-216ENST00000464275 COL4A1P02462 1669 aa25.86■■□□□ 1.73
PDLIM2-216ENST00000464275 SRP68Q9UHB9 627 aaKnown RBP25.86■■□□□ 1.73
PDLIM2-216ENST00000464275 HMGB1P09429 215 aaKnown RBP25.85■■□□□ 1.73
PDLIM2-216ENST00000464275 GTF2E1P29083 439 aaPredicted RBP25.85■■□□□ 1.73
PDLIM2-216ENST00000464275 KLHL40Q2TBA0 621 aa25.85■■□□□ 1.73
PDLIM2-216ENST00000464275 SMIM5Q71RC9 77 aa25.85■■□□□ 1.73
PDLIM2-216ENST00000464275 SETDB2Q96T68 719 aa25.85■■□□□ 1.73
PDLIM2-216ENST00000464275 BCL11BQ9C0K0 894 aaPredicted RBP25.85■■□□□ 1.73
PDLIM2-216ENST00000464275 COL9A3Q14050 684 aaPredicted RBP25.84■■□□□ 1.73
PDLIM2-216ENST00000464275 TOB2Q14106 344 aaPredicted RBP25.84■■□□□ 1.73
PDLIM2-216ENST00000464275 ANKRD18AQ8IVF6 992 aa25.84■■□□□ 1.73
PDLIM2-216ENST00000464275 ADD2P35612 726 aa25.84■■□□□ 1.73
PDLIM2-216ENST00000464275 CHRNDQ07001 517 aa25.84■■□□□ 1.73
PDLIM2-216ENST00000464275 QTRT2Q9H974 415 aaKnown RBP25.84■■□□□ 1.73
PDLIM2-216ENST00000464275 CTNNA3Q9UI47 895 aa25.84■■□□□ 1.73
PDLIM2-216ENST00000464275 UBR3Q6ZT12 1888 aa25.83■■□□□ 1.73
PDLIM2-216ENST00000464275 ARHGEF1Q92888 912 aaKnown RBP25.83■■□□□ 1.73
PDLIM2-216ENST00000464275 PIH1D3Q9NQM4 214 aaKnown RBP25.83■■□□□ 1.73
PDLIM2-216ENST00000464275 TCEANC2Q96MN5 208 aa25.82■■□□□ 1.72
PDLIM2-216ENST00000464275 UBE3CQ15386 1083 aa25.82■■□□□ 1.72
PDLIM2-216ENST00000464275 STOX1Q6ZVD7 989 aa25.82■■□□□ 1.72
PDLIM2-216ENST00000464275 C3orf67Q6ZVT6 689 aa25.82■■□□□ 1.72
PDLIM2-216ENST00000464275 ST3GAL1Q11201 340 aa25.81■■□□□ 1.72
PDLIM2-216ENST00000464275 FOXD4L5Q5VV16 416 aaPredicted RBP25.81■■□□□ 1.72
PDLIM2-216ENST00000464275 SPATA5Q8NB90 893 aa25.81■■□□□ 1.72
PDLIM2-216ENST00000464275 FOXD4L4Q8WXT5 416 aaPredicted RBP25.81■■□□□ 1.72
PDLIM2-216ENST00000464275 PUS7LQ9H0K6 701 aaKnown RBP25.81■■□□□ 1.72
PDLIM2-216ENST00000464275 LMBRD1Q9NUN5 540 aa25.81■■□□□ 1.72
PDLIM2-216ENST00000464275 SLC9C2Q5TAH2 1124 aa25.8■■□□□ 1.72
PDLIM2-216ENST00000464275 NBPF5PQ86XG9 351 aaPredicted RBP25.8■■□□□ 1.72
PDLIM2-216ENST00000464275 BSDC1Q9NW68 430 aaPredicted RBP25.8■■□□□ 1.72
PDLIM2-216ENST00000464275 GJB2P29033 226 aa25.8■■□□□ 1.72
PDLIM2-216ENST00000464275 MYH13Q9UKX3 1938 aa25.79■■□□□ 1.72
PDLIM2-216ENST00000464275 GPAA1O43292 621 aa25.79■■□□□ 1.72
PDLIM2-216ENST00000464275 TRAPPC3LQ5T215 181 aa25.79■■□□□ 1.72
PDLIM2-216ENST00000464275 TPTE2Q6XPS3 522 aa25.79■■□□□ 1.72
PDLIM2-216ENST00000464275 Q6ZUG5 572 aa25.79■■□□□ 1.72
PDLIM2-216ENST00000464275 DHX32Q7L7V1 743 aaKnown RBP25.79■■□□□ 1.72
PDLIM2-216ENST00000464275 NECAB1Q8N987 351 aa25.79■■□□□ 1.72
PDLIM2-216ENST00000464275 E7EWF7 191 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms