RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 GREM1O60565 184 aa5.54□□□□□ -1.52
GPNMB-205ENST00000463011 GARTP22102 1010 aa5.54□□□□□ -1.52
GPNMB-205ENST00000463011 GRIA4P48058 902 aa5.54□□□□□ -1.52
GPNMB-205ENST00000463011 SOX9P48436 509 aa5.54□□□□□ -1.52
GPNMB-205ENST00000463011 KCNQ4P56696 695 aa5.54□□□□□ -1.52
GPNMB-205ENST00000463011 CAMK2GQ13555 558 aaPredicted RBP5.54□□□□□ -1.52
GPNMB-205ENST00000463011 SCARF1Q14162 830 aa5.54□□□□□ -1.52
GPNMB-205ENST00000463011 GRIN2CQ14957 1233 aa5.54□□□□□ -1.52
GPNMB-205ENST00000463011 SPRED3Q2MJR0 410 aa5.54□□□□□ -1.52
GPNMB-205ENST00000463011 EFHC2Q5JST6 749 aa5.54□□□□□ -1.52
GPNMB-205ENST00000463011 SNAP47Q5SQN1 464 aa5.54□□□□□ -1.52
GPNMB-205ENST00000463011 CCNJLQ8IV13 435 aa5.54□□□□□ -1.52
GPNMB-205ENST00000463011 GOLM1Q8NBJ4 401 aa5.54□□□□□ -1.52
GPNMB-205ENST00000463011 ANKRD24Q8TF21 1146 aa5.54□□□□□ -1.52
GPNMB-205ENST00000463011 HNRNPLLQ8WVV9 542 aaKnown RBP5.54□□□□□ -1.52
GPNMB-205ENST00000463011 MKL1Q969V6 931 aa5.54□□□□□ -1.52
GPNMB-205ENST00000463011 CNTNAP3BQ96NU0 1288 aa5.54□□□□□ -1.52
GPNMB-205ENST00000463011 PNMA5Q96PV4 448 aa5.54□□□□□ -1.52
GPNMB-205ENST00000463011 TRIM55Q9BYV6 548 aa5.54□□□□□ -1.52
GPNMB-205ENST00000463011 CNTNAP3Q9BZ76 1288 aa5.54□□□□□ -1.52
GPNMB-205ENST00000463011 SIRPGQ9P1W8 387 aa5.54□□□□□ -1.52
GPNMB-205ENST00000463011 DYRK1BQ9Y463 629 aa5.54□□□□□ -1.52
GPNMB-205ENST00000463011 SUPT16HQ9Y5B9 1047 aaKnown RBP5.54□□□□□ -1.52
GPNMB-205ENST00000463011 DCDC2BA2VCK2 349 aa5.53□□□□□ -1.52
GPNMB-205ENST00000463011 METTL12A8MUP2 240 aa5.53□□□□□ -1.52
GPNMB-205ENST00000463011 KHNYNO15037 678 aaKnown RBP5.53□□□□□ -1.52
GPNMB-205ENST00000463011 U2SURPO15042 1029 aaKnown RBP5.53□□□□□ -1.52
GPNMB-205ENST00000463011 ATXN7O15265 892 aaPredicted RBP5.53□□□□□ -1.52
GPNMB-205ENST00000463011 KLF4O43474 513 aa5.53□□□□□ -1.52
GPNMB-205ENST00000463011 CLSTN1O94985 981 aa5.53□□□□□ -1.52
GPNMB-205ENST00000463011 PSAPP07602 524 aa5.53□□□□□ -1.52
GPNMB-205ENST00000463011 NFKB1P19838 968 aa5.53□□□□□ -1.52
GPNMB-205ENST00000463011 HSD3B2P26439 372 aa5.53□□□□□ -1.52
GPNMB-205ENST00000463011 PRR20EP86478 221 aa5.53□□□□□ -1.52
GPNMB-205ENST00000463011 PRR20CP86479 221 aa5.53□□□□□ -1.52
GPNMB-205ENST00000463011 PRR20DP86480 221 aa5.53□□□□□ -1.52
GPNMB-205ENST00000463011 PRR20BP86481 221 aa5.53□□□□□ -1.52
GPNMB-205ENST00000463011 PRR20AP86496 221 aa5.53□□□□□ -1.52
GPNMB-205ENST00000463011 APOBRQ0VD83 1088 aa5.53□□□□□ -1.52
GPNMB-205ENST00000463011 HYAL2Q12891 473 aa5.53□□□□□ -1.52
GPNMB-205ENST00000463011 NKD1Q969G9 470 aa5.53□□□□□ -1.52
GPNMB-205ENST00000463011 CEP44Q9C0F1 390 aa5.53□□□□□ -1.52
GPNMB-205ENST00000463011 KCNQ5Q9NR82 932 aa5.53□□□□□ -1.52
GPNMB-205ENST00000463011 TLR7Q9NYK1 1049 aaKnown RBP5.53□□□□□ -1.52
GPNMB-205ENST00000463011 STRIP2Q9ULQ0 834 aa5.53□□□□□ -1.52
GPNMB-205ENST00000463011 R3HCC1Q9Y3T6 440 aaKnown RBP5.53□□□□□ -1.52
GPNMB-205ENST00000463011 CCDC85CA6NKD9 419 aa5.52□□□□□ -1.53
GPNMB-205ENST00000463011 BMP1P13497 986 aa5.52□□□□□ -1.53
GPNMB-205ENST00000463011 CRKP46108 304 aa5.52□□□□□ -1.53
GPNMB-205ENST00000463011 LMNB2Q03252 620 aa5.52□□□□□ -1.53
GPNMB-205ENST00000463011 COL9A2Q14055 689 aaPredicted RBP5.52□□□□□ -1.53
GPNMB-205ENST00000463011 RAB33AQ14088 237 aa5.52□□□□□ -1.53
GPNMB-205ENST00000463011 PCNX4Q63HM2 1172 aa5.52□□□□□ -1.53
GPNMB-205ENST00000463011 ZNF787Q6DD87 383 aa5.52□□□□□ -1.53
GPNMB-205ENST00000463011 TTBK2Q6IQ55 1244 aa5.52□□□□□ -1.53
GPNMB-205ENST00000463011 CCDC81Q6ZN84 652 aa5.52□□□□□ -1.53
GPNMB-205ENST00000463011 RIPOR1Q6ZS17 1223 aa5.52□□□□□ -1.53
GPNMB-205ENST00000463011 GPATCH3Q96I76 525 aa5.52□□□□□ -1.53
GPNMB-205ENST00000463011 NECAB3Q96P71 396 aaPredicted RBP5.52□□□□□ -1.53
GPNMB-205ENST00000463011 HHIPQ96QV1 700 aa5.52□□□□□ -1.53
GPNMB-205ENST00000463011 SRRTQ9BXP5 876 aaKnown RBP5.52□□□□□ -1.53
GPNMB-205ENST00000463011 ZFYVE1Q9HBF4 777 aa5.52□□□□□ -1.53
GPNMB-205ENST00000463011 SEC31BQ9NQW1 1179 aa5.52□□□□□ -1.53
GPNMB-205ENST00000463011 STRN4Q9NRL3 753 aa5.52□□□□□ -1.53
GPNMB-205ENST00000463011 DZANK1Q9NVP4 752 aa5.52□□□□□ -1.53
GPNMB-205ENST00000463011 PRKAG3Q9UGI9 489 aa5.52□□□□□ -1.53
GPNMB-205ENST00000463011 PCDHGC4Q9Y5F7 938 aa5.52□□□□□ -1.53
GPNMB-205ENST00000463011 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.52□□□□□ -1.53
GPNMB-205ENST00000463011 FAM221BA6H8Z2 402 aa5.51□□□□□ -1.53
GPNMB-205ENST00000463011 ENC1O14682 589 aa5.51□□□□□ -1.53
GPNMB-205ENST00000463011 SMAD7O15105 426 aaKnown RBP5.51□□□□□ -1.53
GPNMB-205ENST00000463011 TLR3O15455 904 aaKnown RBP5.51□□□□□ -1.53
GPNMB-205ENST00000463011 EFSO43281 561 aa5.51□□□□□ -1.53
GPNMB-205ENST00000463011 PAGE1O75459 146 aa5.51□□□□□ -1.53
GPNMB-205ENST00000463011 KIF4AO95239 1232 aa5.51□□□□□ -1.53
GPNMB-205ENST00000463011 FAM157BP0CG42 384 aa5.51□□□□□ -1.53
GPNMB-205ENST00000463011 TFE3P19532 575 aaPredicted RBP5.51□□□□□ -1.53
GPNMB-205ENST00000463011 ZNF157P51786 506 aaPredicted RBP5.51□□□□□ -1.53
GPNMB-205ENST00000463011 PLAURQ03405 335 aa5.51□□□□□ -1.53
GPNMB-205ENST00000463011 TNP2Q05952 138 aa5.51□□□□□ -1.53
GPNMB-205ENST00000463011 PTPROQ16827 1216 aa5.51□□□□□ -1.53
GPNMB-205ENST00000463011 SEZ6Q53EL9 994 aa5.51□□□□□ -1.53
GPNMB-205ENST00000463011 FIGNL1Q6PIW4 674 aa5.51□□□□□ -1.53
GPNMB-205ENST00000463011 AGMOQ6ZNB7 445 aa5.51□□□□□ -1.53
GPNMB-205ENST00000463011 RAB44Q7Z6P3 723 aaPredicted RBP5.51□□□□□ -1.53
GPNMB-205ENST00000463011 CEP120Q8N960 986 aa5.51□□□□□ -1.53
GPNMB-205ENST00000463011 ASAP3Q8TDY4 903 aa5.51□□□□□ -1.53
GPNMB-205ENST00000463011 RNPC3Q96LT9 517 aaKnown RBP5.51□□□□□ -1.53
GPNMB-205ENST00000463011 NSUN5Q96P11 429 aaKnown RBP5.51□□□□□ -1.53
GPNMB-205ENST00000463011 SNTG2Q9NY99 539 aa5.51□□□□□ -1.53
GPNMB-205ENST00000463011 DNMT3LQ9UJW3 386 aa5.51□□□□□ -1.53
GPNMB-205ENST00000463011 A0A096LPE4 126 aa5.5□□□□□ -1.53
GPNMB-205ENST00000463011 A0A1W2PPZ6 126 aa5.5□□□□□ -1.53
GPNMB-205ENST00000463011 THBS1P07996 1170 aa5.5□□□□□ -1.53
GPNMB-205ENST00000463011 MAPTP10636 758 aaKnown RBP5.5□□□□□ -1.53
GPNMB-205ENST00000463011 ITPKAP23677 461 aa5.5□□□□□ -1.53
GPNMB-205ENST00000463011 SOX18P35713 384 aa5.5□□□□□ -1.53
GPNMB-205ENST00000463011 SPEM2Q0P670 501 aa5.5□□□□□ -1.53
GPNMB-205ENST00000463011 LAPTM4AQ15012 233 aa5.5□□□□□ -1.53
GPNMB-205ENST00000463011 BNC2Q6ZN30 1099 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms