RNA–Protein interactions for RNA: ENST00000461762.5

C9orf78-204, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-204ENST00000461762 ANKRD7Q92527 254 aa17.72■□□□□ 0.43
C9orf78-204ENST00000461762 USP28Q96RU2 1077 aa17.72■□□□□ 0.43
C9orf78-204ENST00000461762 FTOQ9C0B1 505 aaKnown RBP eCLIP17.72■□□□□ 0.43
C9orf78-204ENST00000461762 PDIA3P30101 505 aaKnown RBP17.72■□□□□ 0.43
C9orf78-204ENST00000461762 CCDC144BQ3MJ40 725 aa17.72■□□□□ 0.43
C9orf78-204ENST00000461762 C11orf57Q6ZUT1 292 aaPredicted RBP17.72■□□□□ 0.43
C9orf78-204ENST00000461762 CCDC144CPQ8IYA2 1237 aa17.72■□□□□ 0.43
C9orf78-204ENST00000461762 CCDC9Q9Y3X0 531 aaKnown RBP17.72■□□□□ 0.43
C9orf78-204ENST00000461762 CCT2P78371 535 aaKnown RBP17.71■□□□□ 0.43
C9orf78-204ENST00000461762 ILDR1Q86SU0 546 aaPredicted RBP17.71■□□□□ 0.43
C9orf78-204ENST00000461762 PKNOX2Q96KN3 472 aa17.71■□□□□ 0.43
C9orf78-204ENST00000461762 ZNF396Q96N95 335 aaPredicted RBP17.71■□□□□ 0.43
C9orf78-204ENST00000461762 ARID3AQ99856 593 aa17.71■□□□□ 0.43
C9orf78-204ENST00000461762 RNF113AO15541 343 aaKnown RBP17.71■□□□□ 0.42
C9orf78-204ENST00000461762 STX1AQ16623 288 aa17.71■□□□□ 0.42
C9orf78-204ENST00000461762 MRFAP1L1Q96HT8 127 aa17.71■□□□□ 0.42
C9orf78-204ENST00000461762 ARFGEF2Q9Y6D5 1785 aa17.7■□□□□ 0.42
C9orf78-204ENST00000461762 CSB-PGBD3P0DP91 1061 aa17.7■□□□□ 0.42
C9orf78-204ENST00000461762 EVCP57679 992 aa17.7■□□□□ 0.42
C9orf78-204ENST00000461762 NCOA5Q9HCD5 579 aaKnown RBP17.7■□□□□ 0.42
C9orf78-204ENST00000461762 CWC25Q9NXE8 425 aaPredicted RBP17.7■□□□□ 0.42
C9orf78-204ENST00000461762 MAST3O60307 1309 aa17.7■□□□□ 0.42
C9orf78-204ENST00000461762 GLI3P10071 1580 aa17.7■□□□□ 0.42
C9orf78-204ENST00000461762 EYA2O00167 538 aa17.69■□□□□ 0.42
C9orf78-204ENST00000461762 FAM160A1Q05DH4 1040 aa17.69■□□□□ 0.42
C9orf78-204ENST00000461762 DNAJC5Q9H3Z4 198 aa17.69■□□□□ 0.42
C9orf78-204ENST00000461762 COL18A1P39060 1754 aa17.69■□□□□ 0.42
C9orf78-204ENST00000461762 GOLGA6L19H0YKK7 550 aa17.69■□□□□ 0.42
C9orf78-204ENST00000461762 LRRC24Q50LG9 513 aa17.69■□□□□ 0.42
C9orf78-204ENST00000461762 TTLL7Q6ZT98 887 aa17.69■□□□□ 0.42
C9orf78-204ENST00000461762 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.69■□□□□ 0.42
C9orf78-204ENST00000461762 CHMP4CQ96CF2 233 aa17.69■□□□□ 0.42
C9orf78-204ENST00000461762 ATG3Q9NT62 314 aa17.69■□□□□ 0.42
C9orf78-204ENST00000461762 AFDNP55196 1824 aaKnown RBP17.69■□□□□ 0.42
C9orf78-204ENST00000461762 FDPSP14324 419 aaKnown RBP17.68■□□□□ 0.42
C9orf78-204ENST00000461762 FOSBP53539 338 aa17.68■□□□□ 0.42
C9orf78-204ENST00000461762 CCDC73Q6ZRK6 1079 aa17.68■□□□□ 0.42
C9orf78-204ENST00000461762 CIAO1O76071 339 aa17.68■□□□□ 0.42
C9orf78-204ENST00000461762 IFIT1P09914 478 aaKnown RBP17.68■□□□□ 0.42
C9orf78-204ENST00000461762 RBM6P78332 1123 aaKnown RBP17.68■□□□□ 0.42
C9orf78-204ENST00000461762 PPP4R3BQ5MIZ7 849 aa17.68■□□□□ 0.42
C9orf78-204ENST00000461762 LRRC8AQ8IWT6 810 aa17.68■□□□□ 0.42
C9orf78-204ENST00000461762 DHX40Q8IX18 779 aaKnown RBP17.68■□□□□ 0.42
C9orf78-204ENST00000461762 SMTNL1A8MU46 457 aa17.67■□□□□ 0.42
C9orf78-204ENST00000461762 PRDM4Q9UKN5 801 aa17.67■□□□□ 0.42
C9orf78-204ENST00000461762 M0R2C6 588 aa17.67■□□□□ 0.42
C9orf78-204ENST00000461762 NEMFO60524 1076 aa17.67■□□□□ 0.42
C9orf78-204ENST00000461762 KINO60870 393 aaKnown RBP17.67■□□□□ 0.42
C9orf78-204ENST00000461762 TNNT1P13805 278 aa17.67■□□□□ 0.42
C9orf78-204ENST00000461762 SYCP1Q15431 976 aa17.67■□□□□ 0.42
C9orf78-204ENST00000461762 OSBP2Q969R2 916 aa17.67■□□□□ 0.42
C9orf78-204ENST00000461762 C16orf45Q96MC5 204 aaPredicted RBP17.67■□□□□ 0.42
C9orf78-204ENST00000461762 ANO10Q9NW15 660 aa17.67■□□□□ 0.42
C9orf78-204ENST00000461762 RTEL1Q9NZ71 1219 aa17.67■□□□□ 0.42
C9orf78-204ENST00000461762 A0A1B0GUL7 405 aa17.66■□□□□ 0.42
C9orf78-204ENST00000461762 CHRNA2Q15822 529 aa17.66■□□□□ 0.42
C9orf78-204ENST00000461762 TTLL5Q6EMB2 1281 aa17.66■□□□□ 0.42
C9orf78-204ENST00000461762 CHST3Q7LGC8 479 aa17.66■□□□□ 0.42
C9orf78-204ENST00000461762 FMR1NBQ8N0W7 255 aaPredicted RBP17.66■□□□□ 0.42
C9orf78-204ENST00000461762 PDCL2Q8N4E4 241 aa17.66■□□□□ 0.42
C9orf78-204ENST00000461762 CCDC191Q8NCU4 936 aa17.66■□□□□ 0.42
C9orf78-204ENST00000461762 DDX17Q92841 729 aaKnown RBP17.66■□□□□ 0.42
C9orf78-204ENST00000461762 ZNF594Q96JF6 807 aaPredicted RBP17.66■□□□□ 0.42
C9orf78-204ENST00000461762 PCDHA7Q9UN72 937 aa17.66■□□□□ 0.42
C9orf78-204ENST00000461762 PAXBP1Q9Y5B6 917 aa17.66■□□□□ 0.42
C9orf78-204ENST00000461762 CARMIL3Q8ND23 1372 aa17.66■□□□□ 0.42
C9orf78-204ENST00000461762 ATF3P18847 181 aa17.66■□□□□ 0.42
C9orf78-204ENST00000461762 ATP2B3Q16720 1220 aa17.66■□□□□ 0.42
C9orf78-204ENST00000461762 FSIP1Q8NA03 581 aa17.66■□□□□ 0.42
C9orf78-204ENST00000461762 CABLES1Q8TDN4 633 aa17.66■□□□□ 0.42
C9orf78-204ENST00000461762 FOXP2O15409 715 aa17.65■□□□□ 0.42
C9orf78-204ENST00000461762 ME1P48163 572 aa17.65■□□□□ 0.42
C9orf78-204ENST00000461762 GUCY1B3Q02153 619 aa17.65■□□□□ 0.42
C9orf78-204ENST00000461762 ADALQ6DHV7 355 aa17.65■□□□□ 0.42
C9orf78-204ENST00000461762 LAMA4Q16363 1823 aa17.65■□□□□ 0.42
C9orf78-204ENST00000461762 A0A1W2PQ27 194 aa17.65■□□□□ 0.42
C9orf78-204ENST00000461762 A0A1W2PQ64 194 aa17.65■□□□□ 0.42
C9orf78-204ENST00000461762 A0A1W2PQD8 194 aa17.65■□□□□ 0.42
C9orf78-204ENST00000461762 PUS3Q9BZE2 481 aaKnown RBP17.65■□□□□ 0.42
C9orf78-204ENST00000461762 PKD1L3Q7Z443 1732 aa17.65■□□□□ 0.42
C9orf78-204ENST00000461762 BECN2A8MW95 431 aa17.64■□□□□ 0.41
C9orf78-204ENST00000461762 PPFIA3O75145 1194 aa17.64■□□□□ 0.41
C9orf78-204ENST00000461762 ARID5BQ14865 1188 aa17.64■□□□□ 0.41
C9orf78-204ENST00000461762 A0A087WWV3 80 aa17.64■□□□□ 0.41
C9orf78-204ENST00000461762 A1BGP04217 495 aa17.64■□□□□ 0.41
C9orf78-204ENST00000461762 NCBP1Q09161 790 aaKnown RBP17.64■□□□□ 0.41
C9orf78-204ENST00000461762 TPD52L1Q16890 204 aaPredicted RBP17.64■□□□□ 0.41
C9orf78-204ENST00000461762 LINC00301Q8NCQ3 95 aa17.64■□□□□ 0.41
C9orf78-204ENST00000461762 MRPS27Q92552 414 aaKnown RBP17.64■□□□□ 0.41
C9orf78-204ENST00000461762 GPHNQ9NQX3 736 aaPredicted RBP17.64■□□□□ 0.41
C9orf78-204ENST00000461762 CTNNA3Q9UI47 895 aa17.64■□□□□ 0.41
C9orf78-204ENST00000461762 NAP1L2Q9ULW6 460 aaPredicted RBP17.64■□□□□ 0.41
C9orf78-204ENST00000461762 TNS3Q68CZ2 1445 aa17.63■□□□□ 0.41
C9orf78-204ENST00000461762 CEP57L1Q8IYX8 460 aa17.62■□□□□ 0.41
C9orf78-204ENST00000461762 CEP126Q9P2H0 1117 aa17.62■□□□□ 0.41
C9orf78-204ENST00000461762 LAMB4A4D0S4 1761 aa17.62■□□□□ 0.41
C9orf78-204ENST00000461762 MYH15Q9Y2K3 1946 aa17.62■□□□□ 0.41
C9orf78-204ENST00000461762 ZSCAN20P17040 1043 aaPredicted RBP17.61■□□□□ 0.41
C9orf78-204ENST00000461762 CBX1P83916 185 aa17.61■□□□□ 0.41
C9orf78-204ENST00000461762 ZBTB3Q9H5J0 574 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms