RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 MRPS27Q92552 414 aaKnown RBP4.55□□□□□ -1.68
PPP1R9A-208ENST00000456331 C16orf45Q96MC5 204 aaPredicted RBP4.55□□□□□ -1.68
PPP1R9A-208ENST00000456331 CABP2Q9NPB3 220 aa4.55□□□□□ -1.68
PPP1R9A-208ENST00000456331 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.55□□□□□ -1.684e-7■■■□□ 17.6
PPP1R9A-208ENST00000456331 SYNJ1O43426 1573 aa4.55□□□□□ -1.68
PPP1R9A-208ENST00000456331 N4BP3O15049 544 aa4.55□□□□□ -1.68
PPP1R9A-208ENST00000456331 ZSCAN29Q8IWY8 852 aaPredicted RBP4.55□□□□□ -1.68
PPP1R9A-208ENST00000456331 SYCP3Q8IZU3 236 aa4.55□□□□□ -1.68
PPP1R9A-208ENST00000456331 FAM76AQ8TAV0 307 aa4.55□□□□□ -1.68
PPP1R9A-208ENST00000456331 ERO1AQ96HE7 468 aa4.55□□□□□ -1.68
PPP1R9A-208ENST00000456331 SH2D4AQ9H788 454 aa4.55□□□□□ -1.68
PPP1R9A-208ENST00000456331 COMMD10Q9Y6G5 202 aa4.55□□□□□ -1.68
PPP1R9A-208ENST00000456331 CASQ2O14958 399 aaPredicted RBP4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 GNA14O95837 355 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 PLCD1P51178 756 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 TOM1L2Q6ZVM7 507 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 HS2ST1Q7LGA3 356 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 CCDC51Q96ER9 411 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 RASSF4Q9H2L5 321 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 VCX3AQ9NNX9 186 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 ELP1O95163 1332 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 DNAJC8O75937 253 aaPredicted RBP4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 NKIRAS1Q9NYS0 192 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 LUC7L3O95232 432 aaKnown RBP4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 NOP2P46087 812 aaKnown RBP4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 TMC6Q7Z403 805 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 HOOK2Q96ED9 719 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 MIS12Q9H081 205 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 Q9H521 79 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 LARSQ9P2J5 1176 aaKnown RBP4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 NESP48681 1621 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 PRG4Q92954 1404 aaPredicted RBP4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 STAT6P42226 847 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 SLC8A3P57103 927 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 UBE4AQ14139 1066 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 NBPF6Q5VWK0 638 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 TRIM47Q96LD4 638 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 NBPF4Q96M43 638 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 LZTS2Q9BRK4 669 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 SIL1Q9H173 461 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 TMOD3Q9NYL9 352 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 ATP8B1O43520 1251 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 IDH1O75874 414 aaKnown RBP4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 STK10O94804 968 aaKnown RBP4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 NOLC1Q14978 699 aaKnown RBP eCLIP4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 CCDC96Q2M329 555 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 IFT20Q8IY31 132 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 NECTIN2Q92692 538 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 TEKT1Q969V4 418 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 FAM81BQ96LP2 452 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 CCDC42Q96M95 316 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 C6orf50Q9HD87 102 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 ATP2B2Q01814 1243 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 NYXQ9GZU5 481 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 ZMYM4Q5VZL5 1548 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 EIF3CLB5ME19 914 aaKnown RBP4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 RBM10P98175 930 aaKnown RBP4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 STK3Q13188 491 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 TTC22Q5TAA0 569 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 EIF3CQ99613 913 aaKnown RBP4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 NAIPQ13075 1403 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 EVI5O60447 810 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 HSP90AA5PQ58FG0 334 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 PROSER2Q86WR7 435 aaPredicted RBP4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 CDAN1Q8IWY9 1227 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 TMEM57Q8N5G2 664 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 UBL4BQ8N7F7 174 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 P3H4Q92791 437 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 IWS1Q96ST2 819 aa4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 CWC25Q9NXE8 425 aaPredicted RBP4.54□□□□□ -1.68
PPP1R9A-208ENST00000456331 PPFIA4O75335 1185 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 ZNF189O75820 626 aaPredicted RBP4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 FOSBP53539 338 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 ATP2A3Q93084 1043 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 BCCIPQ9P287 314 aaKnown RBP eCLIP4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 GJB2P29033 226 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 TMEM67Q5HYA8 995 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 CPLX4Q7Z7G2 160 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 RBM42Q9BTD8 480 aaKnown RBP4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 ERICH4A6NGS2 130 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 PRC1O43663 620 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 RBM5P52756 815 aaKnown RBP eCLIP4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 RNASELQ05823 741 aaKnown RBP4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 RILPL1Q5EBL4 403 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 CCDC84Q86UT8 332 aaPredicted RBP4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 IQUBQ8NA54 791 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 SLC17A8Q8NDX2 589 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 NEK11Q8NG66 645 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 EIF2AQ9BY44 585 aaKnown RBP4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 BIVM-ERCC5R4GMW8 1640 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 NUCB1Q02818 461 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 ZBTB16Q05516 673 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 FAM69CQ0P6D2 419 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 SLMAPQ14BN4 828 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 CCDC152Q4G0S7 254 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 SEL1L2Q5TEA6 688 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 SMC5Q8IY18 1101 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 EXOC7Q9UPT5 735 aa4.53□□□□□ -1.68
PPP1R9A-208ENST00000456331 NPC1L1Q9UHC9 1359 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms