RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 MARK1Q9P0L2 795 aa5.77□□□□□ -1.49
HMGB3P21-201ENST00000452483 ANKIB1Q9P2G1 1089 aa5.77□□□□□ -1.49
HMGB3P21-201ENST00000452483 K7ELQ4 463 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P21-201ENST00000452483 ENPP3O14638 875 aa5.76□□□□□ -1.49
HMGB3P21-201ENST00000452483 OIP5O43482 229 aa5.76□□□□□ -1.49
HMGB3P21-201ENST00000452483 PDGFRBP09619 1106 aa5.76□□□□□ -1.49
HMGB3P21-201ENST00000452483 ARAFP10398 606 aa5.76□□□□□ -1.49
HMGB3P21-201ENST00000452483 ARHGAP4P98171 946 aa5.76□□□□□ -1.49
HMGB3P21-201ENST00000452483 FKBP4Q02790 459 aaKnown RBP eCLIP5.76□□□□□ -1.49
HMGB3P21-201ENST00000452483 PSMD2Q13200 908 aa5.76□□□□□ -1.49
HMGB3P21-201ENST00000452483 OCLNQ16625 522 aa5.76□□□□□ -1.49
HMGB3P21-201ENST00000452483 ODR4Q5SWX8 454 aa5.76□□□□□ -1.49
HMGB3P21-201ENST00000452483 GTF3C2Q8WUA4 911 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P21-201ENST00000452483 CEP63Q96MT8 703 aa5.76□□□□□ -1.49
HMGB3P21-201ENST00000452483 QTRT2Q9H974 415 aaKnown RBP5.76□□□□□ -1.49
HMGB3P21-201ENST00000452483 BRD7Q9NPI1 651 aa5.76□□□□□ -1.49
HMGB3P21-201ENST00000452483 GGA1Q9UJY5 639 aa5.76□□□□□ -1.49
HMGB3P21-201ENST00000452483 PRKAB1Q9Y478 270 aa5.76□□□□□ -1.49
HMGB3P21-201ENST00000452483 CCDC189A1A4V9 331 aa5.75□□□□□ -1.49
HMGB3P21-201ENST00000452483 RNF225M0QZC1 329 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P21-201ENST00000452483 LDHBP07195 334 aaKnown RBP5.75□□□□□ -1.49
HMGB3P21-201ENST00000452483 SF3B2Q13435 895 aaKnown RBP5.75□□□□□ -1.49
HMGB3P21-201ENST00000452483 SAFB2Q14151 953 aaKnown RBP eCLIP5.75□□□□□ -1.49
HMGB3P21-201ENST00000452483 ZNF468Q5VIY5 522 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P21-201ENST00000452483 TMC4Q7Z404 712 aa5.75□□□□□ -1.49
HMGB3P21-201ENST00000452483 MCF2L2Q86YR7 1114 aa5.75□□□□□ -1.49
HMGB3P21-201ENST00000452483 NEDD1Q8NHV4 660 aa5.75□□□□□ -1.49
HMGB3P21-201ENST00000452483 PRIMPOLQ96LW4 560 aa5.75□□□□□ -1.49
HMGB3P21-201ENST00000452483 DUSP9Q99956 384 aaKnown RBP5.75□□□□□ -1.49
HMGB3P21-201ENST00000452483 TMX4Q9H1E5 349 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P21-201ENST00000452483 AVENQ9NQS1 362 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P21-201ENST00000452483 CXXC1Q9P0U4 656 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P21-201ENST00000452483 NEURL1BA8MQ27 555 aa5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 SHISA8B8ZZ34 492 aa5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 TGFBR3LH3BV60 316 aa5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 CCER2I3L3R5 266 aa5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 PRPF40AO75400 957 aaKnown RBP5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 LIG1P18858 919 aa5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 ADH6P28332 368 aa5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 MAPK8P45983 427 aa5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 DGKZQ13574 1117 aa5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 IER5Q5VY09 327 aa5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 C1orf229Q6ZS94 237 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 FAM43BQ6ZT52 329 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 TMC7Q7Z402 723 aa5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 BTLAQ7Z6A9 289 aa5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 CKAP2LQ8IYA6 745 aa5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 MYO19Q96H55 970 aa5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 SCYL1Q96KG9 808 aa5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 FRMD6Q96NE9 622 aa5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 CEP89Q96ST8 783 aa5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 PCGF6Q9BYE7 350 aa5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 KLK14Q9P0G3 267 aa5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 BCS1LQ9Y276 419 aa5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 DNMT3AQ9Y6K1 912 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 RPS6KL1Q9Y6S9 549 aa5.74□□□□□ -1.49
HMGB3P21-201ENST00000452483 EPXP11678 715 aa5.73□□□□□ -1.49
HMGB3P21-201ENST00000452483 SFSWAPQ12872 951 aaKnown RBP5.73□□□□□ -1.49
HMGB3P21-201ENST00000452483 MTMR3Q13615 1198 aa5.73□□□□□ -1.49
HMGB3P21-201ENST00000452483 GRIN2CQ14957 1233 aa5.73□□□□□ -1.49
HMGB3P21-201ENST00000452483 ECM1Q16610 540 aa5.73□□□□□ -1.49
HMGB3P21-201ENST00000452483 ZNF654Q8IZM8 581 aa5.73□□□□□ -1.49
HMGB3P21-201ENST00000452483 GALNT6Q8NCL4 622 aa5.73□□□□□ -1.49
HMGB3P21-201ENST00000452483 TMC1Q8TDI8 760 aa5.73□□□□□ -1.49
HMGB3P21-201ENST00000452483 EDARADDQ8WWZ3 215 aa5.73□□□□□ -1.49
HMGB3P21-201ENST00000452483 C8orf48Q96LL4 319 aa5.73□□□□□ -1.49
HMGB3P21-201ENST00000452483 NAP1L4Q99733 375 aaKnown RBP5.73□□□□□ -1.49
HMGB3P21-201ENST00000452483 SENP7Q9BQF6 1050 aa5.73□□□□□ -1.49
HMGB3P21-201ENST00000452483 MKNK1Q9BUB5 465 aa5.73□□□□□ -1.49
HMGB3P21-201ENST00000452483 PLIN1O60240 522 aa5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 KCNQ4P56696 695 aa5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 PCBP4P57723 403 aaKnown RBP5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 DAB2P98082 770 aa5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 AMPD3Q01432 767 aa5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 FMR1Q06787 632 aaKnown RBP eCLIP5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 SPEM2Q0P670 501 aa5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 LMOD3Q0VAK6 560 aa5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 UBE4AQ14139 1066 aa5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 RAB44Q7Z6P3 723 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 FERMT3Q86UX7 667 aa5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 FCHSD1Q86WN1 690 aa5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 AMOTL1Q8IY63 956 aa5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 TMX1Q9H3N1 280 aa5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 TYW1Q9NV66 732 aaKnown RBP5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 SEPT3Q9UH03 358 aa5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 SWAP70Q9UH65 585 aa5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 KLF15Q9UIH9 416 aa5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 FBXO9Q9UK97 447 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 TTF2Q9UNY4 1162 aaKnown RBP5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 KCNH4Q9UQ05 1017 aa5.72□□□□□ -1.49
HMGB3P21-201ENST00000452483 EXOC5O00471 708 aa5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 TREHO43280 583 aa5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 NEFMP07197 916 aa5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 HSP90AA1P07900 732 aaKnown RBP5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 FGRP09769 529 aa5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 AMPD1P23109 780 aa5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 GYS2P54840 703 aa5.71□□□□□ -1.5
HMGB3P21-201ENST00000452483 EVA1CP58658 441 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms