RNA–Protein interactions for RNA: ENST00000450948.1

IGHV5-78-201, Transcript of immunoglobulin heavy variable 5-78 (pseudogene), humanhuman

BASIC

Gene IGHV5-78, Length 295 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV5-78-201ENST00000450948 AFDNP55196 1824 aaKnown RBP6.33□□□□□ -1.4
IGHV5-78-201ENST00000450948 COL4A1P02462 1669 aa6.33□□□□□ -1.4
IGHV5-78-201ENST00000450948 PNMA6EA0A0J9YXQ4 647 aa6.32□□□□□ -1.4
IGHV5-78-201ENST00000450948 CSF1RP07333 972 aa6.32□□□□□ -1.4
IGHV5-78-201ENST00000450948 DPEP1P16444 411 aa6.32□□□□□ -1.4
IGHV5-78-201ENST00000450948 SF3B3Q15393 1217 aaKnown RBP6.32□□□□□ -1.4
IGHV5-78-201ENST00000450948 CEP85Q6P2H3 762 aa6.32□□□□□ -1.4
IGHV5-78-201ENST00000450948 C2CD5Q86YS7 1000 aa6.32□□□□□ -1.4
IGHV5-78-201ENST00000450948 SIRT2Q8IXJ6 389 aa6.32□□□□□ -1.4
IGHV5-78-201ENST00000450948 NLGN2Q8NFZ4 835 aa6.32□□□□□ -1.4
IGHV5-78-201ENST00000450948 DDX12PQ92771 950 aa6.32□□□□□ -1.4
IGHV5-78-201ENST00000450948 NLRP3Q96P20 1036 aa6.32□□□□□ -1.4
IGHV5-78-201ENST00000450948 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.32□□□□□ -1.4
IGHV5-78-201ENST00000450948 FHDC1Q9C0D6 1143 aaPredicted RBP6.32□□□□□ -1.4
IGHV5-78-201ENST00000450948 GREM2Q9H772 168 aa6.32□□□□□ -1.4
IGHV5-78-201ENST00000450948 SEC31BQ9NQW1 1179 aa6.32□□□□□ -1.4
IGHV5-78-201ENST00000450948 PCDHB15Q9Y5E8 787 aa6.32□□□□□ -1.4
IGHV5-78-201ENST00000450948 DDX60Q8IY21 1712 aaKnown RBP6.32□□□□□ -1.4
IGHV5-78-201ENST00000450948 ANKRD31Q8N7Z5 1873 aa6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 A0A0G2JLW4 131 aa6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 NEFLP07196 543 aa6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 SRGNP10124 158 aa6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 KCNA3P22001 575 aa6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 ITGA6P23229 1130 aa6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 PDE6BP35913 854 aa6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 RFX5P48382 616 aaPredicted RBP6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 MTX1Q13505 466 aa6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 WASHC4Q2M389 1173 aa6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 CCDC152Q4G0S7 254 aa6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 MYSM1Q5VVJ2 828 aa6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 SND1Q7KZF4 910 aaKnown RBP eCLIP6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 KLHDC4Q8TBB5 520 aa6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 CELF1Q92879 486 aaKnown RBP6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 ZNF594Q96JF6 807 aaPredicted RBP6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 CHMP4BQ9H444 224 aaKnown RBP6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 GDPD2Q9HCC8 539 aa6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 WWC3Q9ULE0 1092 aa6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 PA2G4Q9UQ80 394 aaKnown RBP6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 CHMP3Q9Y3E7 222 aa6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 CD2APQ9Y5K6 639 aa6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 LAMB2P55268 1798 aa6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 RTL9Q8NET4 1388 aa6.31□□□□□ -1.4
IGHV5-78-201ENST00000450948 COL11A2P13942 1736 aaPredicted RBP6.3□□□□□ -1.4
IGHV5-78-201ENST00000450948 LRP5O75197 1615 aa6.3□□□□□ -1.4
IGHV5-78-201ENST00000450948 H0YIN7 160 aa6.3□□□□□ -1.4
IGHV5-78-201ENST00000450948 SRGAP3O43295 1099 aa6.3□□□□□ -1.4
IGHV5-78-201ENST00000450948 PRKAR2AP13861 404 aaKnown RBP6.3□□□□□ -1.4
IGHV5-78-201ENST00000450948 NPR1P16066 1061 aa6.3□□□□□ -1.4
IGHV5-78-201ENST00000450948 HOXA10P31260 410 aaPredicted RBP6.3□□□□□ -1.4
IGHV5-78-201ENST00000450948 ATP8B2P98198 1209 aa6.3□□□□□ -1.4
IGHV5-78-201ENST00000450948 IFIT5Q13325 482 aaKnown RBP6.3□□□□□ -1.4
IGHV5-78-201ENST00000450948 STYK1Q6J9G0 422 aa6.3□□□□□ -1.4
IGHV5-78-201ENST00000450948 SSH3Q8TE77 659 aa6.3□□□□□ -1.4
IGHV5-78-201ENST00000450948 RPGRQ92834 1020 aaKnown RBP6.3□□□□□ -1.4
IGHV5-78-201ENST00000450948 ZNF622Q969S3 477 aaKnown RBP eCLIP6.3□□□□□ -1.4
IGHV5-78-201ENST00000450948 MASTLQ96GX5 879 aa6.3□□□□□ -1.4
IGHV5-78-201ENST00000450948 RBM17Q96I25 401 aaKnown RBP6.3□□□□□ -1.4
IGHV5-78-201ENST00000450948 TMUB1Q9BVT8 246 aa6.3□□□□□ -1.4
IGHV5-78-201ENST00000450948 BCL11AQ9H165 835 aa6.3□□□□□ -1.4
IGHV5-78-201ENST00000450948 SNRKQ9NRH2 765 aa6.3□□□□□ -1.4
IGHV5-78-201ENST00000450948 HDAC5Q9UQL6 1122 aa6.3□□□□□ -1.4
IGHV5-78-201ENST00000450948 KIAA1551Q9HCM1 1747 aa6.3□□□□□ -1.4
IGHV5-78-201ENST00000450948 ANKRD18BA2A2Z9 1011 aa6.29□□□□□ -1.4
IGHV5-78-201ENST00000450948 ERCC3P19447 782 aa6.29□□□□□ -1.4
IGHV5-78-201ENST00000450948 TGFB2P61812 414 aa6.29□□□□□ -1.4
IGHV5-78-201ENST00000450948 PTPN12Q05209 780 aaKnown RBP6.29□□□□□ -1.4
IGHV5-78-201ENST00000450948 GRAPQ13588 217 aa6.29□□□□□ -1.4
IGHV5-78-201ENST00000450948 CCDC57Q2TAC2 916 aa6.29□□□□□ -1.4
IGHV5-78-201ENST00000450948 PRPF40BQ6NWY9 871 aaKnown RBP6.29□□□□□ -1.4
IGHV5-78-201ENST00000450948 OLFM4Q6UX06 510 aa6.29□□□□□ -1.4
IGHV5-78-201ENST00000450948 DDX46Q7L014 1031 aaKnown RBP6.29□□□□□ -1.4
IGHV5-78-201ENST00000450948 RPAP2Q8IXW5 612 aaPredicted RBP6.29□□□□□ -1.4
IGHV5-78-201ENST00000450948 GRAPLQ8TC17 118 aaPredicted RBP6.29□□□□□ -1.4
IGHV5-78-201ENST00000450948 CRAMP1Q96RY5 1269 aa6.29□□□□□ -1.4
IGHV5-78-201ENST00000450948 SYT17Q9BSW7 474 aa6.29□□□□□ -1.4
IGHV5-78-201ENST00000450948 REPIN1Q9BWE0 567 aaKnown RBP6.29□□□□□ -1.4
IGHV5-78-201ENST00000450948 PUS3Q9BZE2 481 aaKnown RBP6.29□□□□□ -1.4
IGHV5-78-201ENST00000450948 SIL1Q9H173 461 aa6.29□□□□□ -1.4
IGHV5-78-201ENST00000450948 FAM217BQ9NTX9 383 aaPredicted RBP6.29□□□□□ -1.4
IGHV5-78-201ENST00000450948 KIF13BQ9NQT8 1826 aa6.29□□□□□ -1.4
IGHV5-78-201ENST00000450948 PPEF1O14829 653 aaPredicted RBP6.28□□□□□ -1.4
IGHV5-78-201ENST00000450948 HMMRO75330 724 aa6.28□□□□□ -1.4
IGHV5-78-201ENST00000450948 IGHDP01880 384 aa6.28□□□□□ -1.4
IGHV5-78-201ENST00000450948 RPS8P62241 208 aaKnown RBP6.28□□□□□ -1.4
IGHV5-78-201ENST00000450948 CACNB1Q02641 598 aaPredicted RBP6.28□□□□□ -1.4
IGHV5-78-201ENST00000450948 AAMPQ13685 434 aa6.28□□□□□ -1.4
IGHV5-78-201ENST00000450948 LRRC24Q50LG9 513 aa6.28□□□□□ -1.4
IGHV5-78-201ENST00000450948 PPP2R2DQ66LE6 453 aa6.28□□□□□ -1.4
IGHV5-78-201ENST00000450948 ATG9AQ7Z3C6 839 aa6.28□□□□□ -1.4
IGHV5-78-201ENST00000450948 ANKRD18AQ8IVF6 992 aa6.28□□□□□ -1.4
IGHV5-78-201ENST00000450948 TTLL6Q8N841 843 aa6.28□□□□□ -1.4
IGHV5-78-201ENST00000450948 CDC5LQ99459 802 aaKnown RBP6.28□□□□□ -1.4
IGHV5-78-201ENST00000450948 EPAS1Q99814 870 aa6.28□□□□□ -1.4
IGHV5-78-201ENST00000450948 COPRSQ9NQ92 184 aa6.28□□□□□ -1.4
IGHV5-78-201ENST00000450948 PDZRN3Q9UPQ7 1066 aa6.28□□□□□ -1.4
IGHV5-78-201ENST00000450948 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.28□□□□□ -1.4
IGHV5-78-201ENST00000450948 IVNS1ABPQ9Y6Y0 642 aa6.28□□□□□ -1.4
IGHV5-78-201ENST00000450948 EYA2O00167 538 aa6.27□□□□□ -1.41
IGHV5-78-201ENST00000450948 SURF6O75683 361 aaKnown RBP6.27□□□□□ -1.41
IGHV5-78-201ENST00000450948 BBOX1O75936 387 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms