RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 PARP10Q53GL7 1025 aa11.65□□□□□ -0.54
SCN10A-201ENST00000449082 A0A1W2PP64 1363 aa11.65□□□□□ -0.54
SCN10A-201ENST00000449082 TFCP2Q12800 502 aa11.65□□□□□ -0.54
SCN10A-201ENST00000449082 PDCL2Q8N4E4 241 aa11.65□□□□□ -0.54
SCN10A-201ENST00000449082 USP25Q9UHP3 1055 aa11.65□□□□□ -0.54
SCN10A-201ENST00000449082 DENND2AQ9ULE3 1009 aa11.65□□□□□ -0.54
SCN10A-201ENST00000449082 ISM2Q6H9L7 571 aa11.65□□□□□ -0.54
SCN10A-201ENST00000449082 CNBD1Q8NA66 436 aa11.65□□□□□ -0.54
SCN10A-201ENST00000449082 PTPRKQ15262 1439 aa11.65□□□□□ -0.55
SCN10A-201ENST00000449082 N4BP3O15049 544 aa11.64□□□□□ -0.55
SCN10A-201ENST00000449082 DDX21Q9NR30 783 aaKnown RBP eCLIP11.64□□□□□ -0.55
SCN10A-201ENST00000449082 CCNL1Q9UK58 526 aaPredicted RBP11.64□□□□□ -0.55
SCN10A-201ENST00000449082 SHANK2Q9UPX8 1470 aa11.64□□□□□ -0.55
SCN10A-201ENST00000449082 VAMP4O75379 141 aa11.64□□□□□ -0.55
SCN10A-201ENST00000449082 MIGA1Q8NAN2 632 aa11.64□□□□□ -0.55
SCN10A-201ENST00000449082 CTAGE1Q96RT6 745 aa11.64□□□□□ -0.55
SCN10A-201ENST00000449082 MMRN2Q9H8L6 949 aa11.64□□□□□ -0.55
SCN10A-201ENST00000449082 MAP3K19Q56UN5 1328 aa11.64□□□□□ -0.55
SCN10A-201ENST00000449082 PHACTR2O75167 634 aa11.64□□□□□ -0.55
SCN10A-201ENST00000449082 ABCC2Q92887 1545 aa11.64□□□□□ -0.55
SCN10A-201ENST00000449082 PARD3Q8TEW0 1356 aa11.64□□□□□ -0.55
SCN10A-201ENST00000449082 AFMP43652 599 aa11.64□□□□□ -0.55
SCN10A-201ENST00000449082 MAP2K1Q02750 393 aaPredicted RBP11.64□□□□□ -0.55
SCN10A-201ENST00000449082 NCBP1Q09161 790 aaKnown RBP11.64□□□□□ -0.55
SCN10A-201ENST00000449082 TTC6Q86TZ1 520 aa11.64□□□□□ -0.55
SCN10A-201ENST00000449082 BABAM1Q9NWV8 329 aa11.63□□□□□ -0.55
SCN10A-201ENST00000449082 PCDHB15Q9Y5E8 787 aa11.63□□□□□ -0.55
SCN10A-201ENST00000449082 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.63□□□□□ -0.55
SCN10A-201ENST00000449082 TCOF1Q13428 1488 aaKnown RBP11.63□□□□□ -0.55
SCN10A-201ENST00000449082 UVSSAQ2YD98 709 aa11.63□□□□□ -0.55
SCN10A-201ENST00000449082 CEP85Q6P2H3 762 aa11.63□□□□□ -0.55
SCN10A-201ENST00000449082 BICC1Q9H694 974 aaKnown RBP11.63□□□□□ -0.55
SCN10A-201ENST00000449082 SH2D4AQ9H788 454 aa11.63□□□□□ -0.55
SCN10A-201ENST00000449082 WDR62O43379 1518 aa11.63□□□□□ -0.55
SCN10A-201ENST00000449082 TRIM75PA6NK02 468 aa11.63□□□□□ -0.55
SCN10A-201ENST00000449082 KRT2P35908 639 aa11.63□□□□□ -0.55
SCN10A-201ENST00000449082 PRPF4BQ13523 1007 aaKnown RBP11.63□□□□□ -0.55
SCN10A-201ENST00000449082 PLBD2Q8NHP8 589 aa11.63□□□□□ -0.55
SCN10A-201ENST00000449082 TCEANC2Q96MN5 208 aa11.63□□□□□ -0.55
SCN10A-201ENST00000449082 ATP10AO60312 1499 aa11.63□□□□□ -0.55
SCN10A-201ENST00000449082 GNA11P29992 359 aa11.62□□□□□ -0.55
SCN10A-201ENST00000449082 MRPS27Q92552 414 aaKnown RBP11.62□□□□□ -0.55
SCN10A-201ENST00000449082 SYNCQ9H7C4 482 aa11.62□□□□□ -0.55
SCN10A-201ENST00000449082 ACTN2P35609 894 aa11.62□□□□□ -0.55
SCN10A-201ENST00000449082 SPAG1Q07617 926 aa11.62□□□□□ -0.55
SCN10A-201ENST00000449082 EHBP1Q8NDI1 1231 aa11.62□□□□□ -0.55
SCN10A-201ENST00000449082 POTEB2H3BUK9 544 aa11.62□□□□□ -0.55
SCN10A-201ENST00000449082 KRT79Q5XKE5 535 aa11.62□□□□□ -0.55
SCN10A-201ENST00000449082 SPAG5Q96R06 1193 aa11.62□□□□□ -0.55
SCN10A-201ENST00000449082 TRMT1Q9NXH9 659 aaKnown RBP11.62□□□□□ -0.55
SCN10A-201ENST00000449082 ASIC1P78348 528 aa11.62□□□□□ -0.55
SCN10A-201ENST00000449082 DCTPP1Q9H773 170 aa11.62□□□□□ -0.55
SCN10A-201ENST00000449082 PSMA7O14818 248 aa11.62□□□□□ -0.55
SCN10A-201ENST00000449082 ZNF790Q6PG37 636 aa11.62□□□□□ -0.55
SCN10A-201ENST00000449082 RBM28Q9NW13 759 aaKnown RBP11.62□□□□□ -0.55
SCN10A-201ENST00000449082 SBNO1A3KN83 1393 aa11.62□□□□□ -0.55
SCN10A-201ENST00000449082 RAD50Q92878 1312 aa11.62□□□□□ -0.55
SCN10A-201ENST00000449082 PIK3C2GO75747 1445 aa11.62□□□□□ -0.55
SCN10A-201ENST00000449082 TSPYL6Q8N831 410 aa11.61□□□□□ -0.55
SCN10A-201ENST00000449082 PLVAPQ9BX97 442 aa11.61□□□□□ -0.55
SCN10A-201ENST00000449082 SBNO2Q9Y2G9 1366 aa11.61□□□□□ -0.55
SCN10A-201ENST00000449082 CA8P35219 290 aa11.61□□□□□ -0.55
SCN10A-201ENST00000449082 IMPG2Q9BZV3 1241 aa11.61□□□□□ -0.55
SCN10A-201ENST00000449082 WWC3Q9ULE0 1092 aa11.61□□□□□ -0.55
SCN10A-201ENST00000449082 AKR1B10O60218 316 aa11.61□□□□□ -0.55
SCN10A-201ENST00000449082 ADCY5O95622 1261 aa11.61□□□□□ -0.55
SCN10A-201ENST00000449082 KAT6BQ8WYB5 2073 aa11.61□□□□□ -0.55
SCN10A-201ENST00000449082 CCDC171Q6TFL3 1326 aa11.61□□□□□ -0.55
SCN10A-201ENST00000449082 HLTFQ14527 1009 aaKnown RBP eCLIP11.61□□□□□ -0.55
SCN10A-201ENST00000449082 PHACTR3Q96KR7 559 aa11.61□□□□□ -0.55
SCN10A-201ENST00000449082 COMMD10Q9Y6G5 202 aa11.61□□□□□ -0.55
SCN10A-201ENST00000449082 UFL1O94874 794 aa11.61□□□□□ -0.55
SCN10A-201ENST00000449082 NAP1L4Q99733 375 aaKnown RBP11.61□□□□□ -0.55
SCN10A-201ENST00000449082 TCHPQ9BT92 498 aa11.61□□□□□ -0.55
SCN10A-201ENST00000449082 GTPBP4Q9BZE4 634 aaKnown RBP11.61□□□□□ -0.55
SCN10A-201ENST00000449082 HELLSQ9NRZ9 838 aa11.61□□□□□ -0.55
SCN10A-201ENST00000449082 EDC4Q6P2E9 1401 aaKnown RBP11.61□□□□□ -0.55
SCN10A-201ENST00000449082 PLCD4Q9BRC7 762 aa11.61□□□□□ -0.55
SCN10A-201ENST00000449082 SH3TC1Q8TE82 1336 aa11.6□□□□□ -0.55
SCN10A-201ENST00000449082 SHTN1A0MZ66 631 aa11.6□□□□□ -0.55
SCN10A-201ENST00000449082 FAM13AO94988 1023 aa11.6□□□□□ -0.55
SCN10A-201ENST00000449082 UBASH3AP57075 661 aa11.6□□□□□ -0.55
SCN10A-201ENST00000449082 LRRC45Q96CN5 670 aa11.6□□□□□ -0.55
SCN10A-201ENST00000449082 METTL22Q9BUU2 404 aaPredicted RBP11.6□□□□□ -0.55
SCN10A-201ENST00000449082 TMX1Q9H3N1 280 aa11.6□□□□□ -0.55
SCN10A-201ENST00000449082 PDE8AO60658 829 aa11.6□□□□□ -0.55
SCN10A-201ENST00000449082 PARP1P09874 1014 aaKnown RBP11.6□□□□□ -0.55
SCN10A-201ENST00000449082 MAP3K9P80192 1104 aa11.6□□□□□ -0.55
SCN10A-201ENST00000449082 SPECC1Q5M775 1068 aa11.6□□□□□ -0.55
SCN10A-201ENST00000449082 CREB3L3Q68CJ9 461 aa11.6□□□□□ -0.55
SCN10A-201ENST00000449082 TTC12Q9H892 705 aaPredicted RBP11.6□□□□□ -0.55
SCN10A-201ENST00000449082 STAMBPO95630 424 aa11.6□□□□□ -0.55
SCN10A-201ENST00000449082 HIBADHP31937 336 aaKnown RBP11.6□□□□□ -0.55
SCN10A-201ENST00000449082 CYLC1P35663 651 aaPredicted RBP11.6□□□□□ -0.55
SCN10A-201ENST00000449082 KLHL40Q2TBA0 621 aa11.6□□□□□ -0.55
SCN10A-201ENST00000449082 TEX11Q8IYF3 940 aa11.6□□□□□ -0.55
SCN10A-201ENST00000449082 ARHGEF10O15013 1369 aa11.6□□□□□ -0.55
SCN10A-201ENST00000449082 ITGA6P23229 1130 aa11.6□□□□□ -0.55
SCN10A-201ENST00000449082 MARCKSP29966 332 aaPredicted RBP11.6□□□□□ -0.55
SCN10A-201ENST00000449082 DHX32Q7L7V1 743 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms