RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 TMOD4Q9NZQ9 345 aa7.54□□□□□ -1.2
USP46-201ENST00000441222 LUC7L2Q9Y383 392 aaKnown RBP7.54□□□□□ -1.2
USP46-201ENST00000441222 CUL7Q14999 1698 aa7.54□□□□□ -1.2
USP46-201ENST00000441222 SRGAP1Q7Z6B7 1085 aa7.54□□□□□ -1.2
USP46-201ENST00000441222 FAM200AQ8TCP9 573 aa7.54□□□□□ -1.2
USP46-201ENST00000441222 MRPS27Q92552 414 aaKnown RBP7.54□□□□□ -1.2
USP46-201ENST00000441222 ARHGAP24Q8N264 748 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 NKIRAS1Q9NYS0 192 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 STK10O94804 968 aaKnown RBP7.53□□□□□ -1.2
USP46-201ENST00000441222 SKILP12757 684 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 FLIIQ13045 1269 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 VCXQ9H320 206 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 PPP1R7Q15435 360 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 HS1BP3Q53T59 392 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 INTS8Q75QN2 995 aaKnown RBP7.53□□□□□ -1.2
USP46-201ENST00000441222 CACYBPQ9HB71 228 aaKnown RBP7.53□□□□□ -1.2
USP46-201ENST00000441222 FRMD4BQ9Y2L6 1034 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.53□□□□□ -1.2
USP46-201ENST00000441222 PTPN23Q9H3S7 1636 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 TRIM75PA6NK02 468 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 CAPN2P17655 700 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 ASIC1P78348 528 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 NBPF6Q5VWK0 638 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 KRT79Q5XKE5 535 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 NBPF4Q96M43 638 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 NYXQ9GZU5 481 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 PRG4Q92954 1404 aaPredicted RBP7.53□□□□□ -1.2
USP46-201ENST00000441222 ACTN4O43707 911 aaKnown RBP7.53□□□□□ -1.2
USP46-201ENST00000441222 TTC31Q49AM3 519 aaPredicted RBP7.53□□□□□ -1.2
USP46-201ENST00000441222 CNGA4Q8IV77 575 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 CCDC114Q96M63 670 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 MMRN2Q9H8L6 949 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 MAP3K2Q9Y2U5 619 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 CA8P35219 290 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 MCM10Q7L590 875 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 NBPF11Q86T75 865 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 RAB11FIP4Q86YS3 637 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 IFNL2Q8IZJ0 200 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 NCAPGQ9BPX3 1015 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 BCAP29Q9UHQ4 241 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 SMARCA5O60264 1052 aaPredicted RBP7.53□□□□□ -1.2
USP46-201ENST00000441222 CRCPO75575 148 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 SATB1Q01826 763 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 SEL1L2Q5TEA6 688 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 FYB2Q5VWT5 728 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 TBC1D9Q6ZT07 1266 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 EPSTI1Q96J88 318 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 NUF2Q9BZD4 464 aa7.53□□□□□ -1.2
USP46-201ENST00000441222 FEZ2Q9UHY8 353 aaPredicted RBP7.53□□□□□ -1.2
USP46-201ENST00000441222 STX10O60499 249 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 SNRPA1P09661 255 aaKnown RBP7.52□□□□□ -1.21
USP46-201ENST00000441222 SETSIPP0DME0 302 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 TRIM14Q14142 442 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 CCDC65Q8IXS2 484 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 RRP36Q96EU6 259 aaKnown RBP7.52□□□□□ -1.21
USP46-201ENST00000441222 CPSF2Q9P2I0 782 aaKnown RBP7.52□□□□□ -1.21
USP46-201ENST00000441222 TACC3Q9Y6A5 838 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 WDR97A6NE52 1622 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 GIGYF1O75420 1035 aaPredicted RBP7.52□□□□□ -1.21
USP46-201ENST00000441222 SYT1P21579 422 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 SSFA2P28290 1259 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 MCMDC2Q4G0Z9 681 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 DTHD1Q6ZMT9 781 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 HDXQ7Z353 690 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 SMARCC2Q8TAQ2 1214 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 GLT8D2Q9H1C3 349 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 DNAI1Q9UI46 699 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 RAD54L2Q9Y4B4 1467 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 BRAPQ7Z569 592 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 VTI1AQ96AJ9 217 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 SEC62Q99442 399 aaKnown RBP7.52□□□□□ -1.21
USP46-201ENST00000441222 SELENOSQ9BQE4 189 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 TBC1D2Q9BYX2 928 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 RSPH14Q9UHP6 348 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 A0A1B0GUA9 196 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 DKC1O60832 514 aaKnown RBP eCLIP7.52□□□□□ -1.21
USP46-201ENST00000441222 GBP1P32455 592 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 NAPAP54920 295 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 SH3BGRP55822 239 aaPredicted RBP7.52□□□□□ -1.21
USP46-201ENST00000441222 ANO6Q4KMQ2 910 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 TMX1Q9H3N1 280 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 DMRT2Q9Y5R5 561 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 SETD1BQ9UPS6 1966 aaKnown RBP7.52□□□□□ -1.21
USP46-201ENST00000441222 NCAPD3P42695 1498 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 KLF18A0A0U1RQI7 1052 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 HEATR3Q7Z4Q2 680 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.52□□□□□ -1.21
USP46-201ENST00000441222 FAM76AQ8TAV0 307 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 MIPOL1Q8TD10 442 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 ITSN2Q9NZM3 1697 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 KRT2P35908 639 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 ZSCAN23Q3MJ62 389 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 ZNF804AQ7Z570 1209 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 ZSWIM4Q9H7M6 989 aa7.52□□□□□ -1.21
USP46-201ENST00000441222 CASQ2O14958 399 aaPredicted RBP7.51□□□□□ -1.21
USP46-201ENST00000441222 IRX4P78413 519 aa7.51□□□□□ -1.21
USP46-201ENST00000441222 GEN1Q17RS7 908 aa7.51□□□□□ -1.21
USP46-201ENST00000441222 PRDM10Q9NQV6 1147 aa7.51□□□□□ -1.21
USP46-201ENST00000441222 RBM28Q9NW13 759 aaKnown RBP7.51□□□□□ -1.21
USP46-201ENST00000441222 ERCC5P28715 1186 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms