RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 TMX3Q96JJ7 454 aa17.9■□□□□ 0.46
IFT140-204ENST00000439987 COL4A1P02462 1669 aa17.9■□□□□ 0.46
IFT140-204ENST00000439987 SLC27A2O14975 620 aa17.89■□□□□ 0.46
IFT140-204ENST00000439987 ARID4AP29374 1257 aaPredicted RBP17.89■□□□□ 0.46
IFT140-204ENST00000439987 PHKA1P46020 1223 aa17.89■□□□□ 0.46
IFT140-204ENST00000439987 NLRP3Q96P20 1036 aa17.89■□□□□ 0.46
IFT140-204ENST00000439987 TM6SF1Q9BZW5 370 aa17.89■□□□□ 0.46
IFT140-204ENST00000439987 CASTP20810 708 aaKnown RBP17.89■□□□□ 0.45
IFT140-204ENST00000439987 CHRNDQ07001 517 aa17.89■□□□□ 0.45
IFT140-204ENST00000439987 ADCK5Q3MIX3 580 aa17.89■□□□□ 0.45
IFT140-204ENST00000439987 SLFNL1Q499Z3 407 aa17.89■□□□□ 0.45
IFT140-204ENST00000439987 ZFYP08048 801 aaPredicted RBP17.88■□□□□ 0.45
IFT140-204ENST00000439987 UQCRFS1P1P0C7P4 283 aa17.88■□□□□ 0.45
IFT140-204ENST00000439987 JAKMIP1Q96N16 626 aaKnown RBP17.88■□□□□ 0.45
IFT140-204ENST00000439987 TTC14Q96N46 770 aa17.88■□□□□ 0.45
IFT140-204ENST00000439987 SNAP23O00161 211 aa17.88■□□□□ 0.45
IFT140-204ENST00000439987 BSDC1Q9NW68 430 aaPredicted RBP17.88■□□□□ 0.45
IFT140-204ENST00000439987 HMG20BQ9P0W2 317 aa17.88■□□□□ 0.45
IFT140-204ENST00000439987 CARMIL3Q8ND23 1372 aa17.88■□□□□ 0.45
IFT140-204ENST00000439987 ZSWIM6Q9HCJ5 1215 aa17.87■□□□□ 0.45
IFT140-204ENST00000439987 NFIXQ14938 502 aa17.87■□□□□ 0.45
IFT140-204ENST00000439987 U3KPZ7 1027 aaPredicted RBP17.87■□□□□ 0.45
IFT140-204ENST00000439987 MAST3O60307 1309 aa17.87■□□□□ 0.45
IFT140-204ENST00000439987 TAF1P21675 1872 aa17.87■□□□□ 0.45
IFT140-204ENST00000439987 TTF1Q15361 905 aaPredicted RBP17.86■□□□□ 0.45
IFT140-204ENST00000439987 TXNRD1Q16881 649 aa17.86■□□□□ 0.45
IFT140-204ENST00000439987 NOL8Q76FK4 1167 aaKnown RBP17.86■□□□□ 0.45
IFT140-204ENST00000439987 CWC22Q9HCG8 908 aaKnown RBP17.86■□□□□ 0.45
IFT140-204ENST00000439987 RPAP1Q9BWH6 1393 aaPredicted RBP17.86■□□□□ 0.45
IFT140-204ENST00000439987 CYP2E1P05181 493 aaPredicted RBP17.86■□□□□ 0.45
IFT140-204ENST00000439987 CUL4AQ13619 759 aa17.86■□□□□ 0.45
IFT140-204ENST00000439987 TSGA10IPQ3SY00 556 aa17.86■□□□□ 0.45
IFT140-204ENST00000439987 PROM2Q8N271 834 aa17.86■□□□□ 0.45
IFT140-204ENST00000439987 CELF1Q92879 486 aaKnown RBP17.86■□□□□ 0.45
IFT140-204ENST00000439987 CYP46A1Q9Y6A2 500 aa17.86■□□□□ 0.45
IFT140-204ENST00000439987 HMGB2P26583 209 aaKnown RBP17.86■□□□□ 0.45
IFT140-204ENST00000439987 RAB3GAP1Q15042 981 aa17.86■□□□□ 0.45
IFT140-204ENST00000439987 CCDC24Q8N4L8 307 aa17.86■□□□□ 0.45
IFT140-204ENST00000439987 OSBP2Q969R2 916 aa17.86■□□□□ 0.45
IFT140-204ENST00000439987 DSCC1Q9BVC3 393 aa17.86■□□□□ 0.45
IFT140-204ENST00000439987 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.86■□□□□ 0.45
IFT140-204ENST00000439987 NPHP1O15259 732 aa17.85■□□□□ 0.45
IFT140-204ENST00000439987 CPA1P15085 419 aa17.85■□□□□ 0.45
IFT140-204ENST00000439987 PSMA5P28066 241 aa17.85■□□□□ 0.45
IFT140-204ENST00000439987 AK2P54819 239 aa17.85■□□□□ 0.45
IFT140-204ENST00000439987 ZGPATQ8N5A5 531 aaKnown RBP17.85■□□□□ 0.45
IFT140-204ENST00000439987 MYH7P12883 1935 aa17.85■□□□□ 0.45
IFT140-204ENST00000439987 VPS53Q5VIR6 699 aa17.85■□□□□ 0.45
IFT140-204ENST00000439987 RUFY3Q7L099 469 aa17.85■□□□□ 0.45
IFT140-204ENST00000439987 M0R2C6 588 aa17.84■□□□□ 0.45
IFT140-204ENST00000439987 GYS1P13807 737 aa17.84■□□□□ 0.45
IFT140-204ENST00000439987 RXRBP28702 533 aa17.84■□□□□ 0.45
IFT140-204ENST00000439987 MINPP1Q9UNW1 487 aa17.84■□□□□ 0.45
IFT140-204ENST00000439987 A0A1B0GUL6 1792 aa17.84■□□□□ 0.45
IFT140-204ENST00000439987 RPS8P62241 208 aaKnown RBP17.84■□□□□ 0.45
IFT140-204ENST00000439987 WASHC4Q2M389 1173 aa17.84■□□□□ 0.45
IFT140-204ENST00000439987 ZSCAN25Q6NSZ9 544 aa17.84■□□□□ 0.45
IFT140-204ENST00000439987 SPATA5Q8NB90 893 aa17.84■□□□□ 0.45
IFT140-204ENST00000439987 APPBP2Q92624 585 aa17.84■□□□□ 0.45
IFT140-204ENST00000439987 INTS4Q96HW7 963 aaKnown RBP17.84■□□□□ 0.45
IFT140-204ENST00000439987 PDRG1Q9NUG6 133 aa17.84■□□□□ 0.45
IFT140-204ENST00000439987 TAF6LQ9Y6J9 622 aa17.84■□□□□ 0.45
IFT140-204ENST00000439987 RASGRF1Q13972 1273 aa17.83■□□□□ 0.44
IFT140-204ENST00000439987 CNBD1Q8NA66 436 aa17.83■□□□□ 0.44
IFT140-204ENST00000439987 PIH1D3Q9NQM4 214 aaKnown RBP17.83■□□□□ 0.44
IFT140-204ENST00000439987 PLSCR1O15162 318 aa17.83■□□□□ 0.44
IFT140-204ENST00000439987 HSPD1P10809 573 aaKnown RBP17.83■□□□□ 0.44
IFT140-204ENST00000439987 BCAMP50895 628 aa17.83■□□□□ 0.44
IFT140-204ENST00000439987 KRT32Q14532 448 aa17.83■□□□□ 0.44
IFT140-204ENST00000439987 LIMCH1Q9UPQ0 1083 aa17.83■□□□□ 0.44
IFT140-204ENST00000439987 TM4SF1P30408 202 aa17.82■□□□□ 0.44
IFT140-204ENST00000439987 UBE4AQ14139 1066 aa17.82■□□□□ 0.44
IFT140-204ENST00000439987 TNPO1Q92973 898 aaKnown RBP17.82■□□□□ 0.44
IFT140-204ENST00000439987 TNRC6CQ9HCJ0 1690 aaKnown RBP17.82■□□□□ 0.44
IFT140-204ENST00000439987 CYP21A2P08686 494 aa17.82■□□□□ 0.44
IFT140-204ENST00000439987 ADD2P35612 726 aa17.82■□□□□ 0.44
IFT140-204ENST00000439987 L1TD1Q5T7N2 865 aaKnown RBP17.82■□□□□ 0.44
IFT140-204ENST00000439987 IDH1O75874 414 aaKnown RBP17.81■□□□□ 0.44
IFT140-204ENST00000439987 SLC9C2Q5TAH2 1124 aa17.81■□□□□ 0.44
IFT140-204ENST00000439987 BLOC1S2Q6QNY1 142 aa17.81■□□□□ 0.44
IFT140-204ENST00000439987 PUS7LQ9H0K6 701 aaKnown RBP17.81■□□□□ 0.44
IFT140-204ENST00000439987 NUCB2P80303 420 aa17.81■□□□□ 0.44
IFT140-204ENST00000439987 MYO5AQ9Y4I1 1855 aaKnown RBP17.8■□□□□ 0.44
IFT140-204ENST00000439987 APBA3O96018 575 aa17.8■□□□□ 0.44
IFT140-204ENST00000439987 MCM4P33991 863 aa17.8■□□□□ 0.44
IFT140-204ENST00000439987 UBE3CQ15386 1083 aa17.8■□□□□ 0.44
IFT140-204ENST00000439987 PRR5LQ6MZQ0 368 aa17.8■□□□□ 0.44
IFT140-204ENST00000439987 RPS6KB1P23443 525 aa17.8■□□□□ 0.44
IFT140-204ENST00000439987 COL9A3Q14050 684 aaPredicted RBP17.8■□□□□ 0.44
IFT140-204ENST00000439987 ZNF804BA4D1E1 1349 aa17.79■□□□□ 0.44
IFT140-204ENST00000439987 LARP6Q9BRS8 491 aaKnown RBP17.79■□□□□ 0.44
IFT140-204ENST00000439987 WTIPA6NIX2 430 aaPredicted RBP17.78■□□□□ 0.44
IFT140-204ENST00000439987 GPAA1O43292 621 aa17.78■□□□□ 0.44
IFT140-204ENST00000439987 PDE6AP16499 860 aa17.78■□□□□ 0.44
IFT140-204ENST00000439987 NEK1Q96PY6 1258 aa17.78■□□□□ 0.44
IFT140-204ENST00000439987 ANKRD2Q9GZV1 360 aa17.78■□□□□ 0.44
IFT140-204ENST00000439987 ALDH8A1Q9H2A2 487 aaPredicted RBP17.78■□□□□ 0.44
IFT140-204ENST00000439987 DOCK2Q92608 1830 aa17.78■□□□□ 0.44
IFT140-204ENST00000439987 ZNF532Q9HCE3 1301 aa17.78■□□□□ 0.44
IFT140-204ENST00000439987 FOXP2O15409 715 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms