RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 MPHOSPH8Q99549 860 aa14.06□□□□□ -0.16
SMAD3-202ENST00000439724 BCL2L12Q9HB09 334 aa14.06□□□□□ -0.16
SMAD3-202ENST00000439724 SEC31BQ9NQW1 1179 aa14.06□□□□□ -0.16
SMAD3-202ENST00000439724 CCNL1Q9UK58 526 aaPredicted RBP14.06□□□□□ -0.16
SMAD3-202ENST00000439724 TAF6LQ9Y6J9 622 aa14.06□□□□□ -0.16
SMAD3-202ENST00000439724 LAMA4Q16363 1823 aa14.06□□□□□ -0.16
SMAD3-202ENST00000439724 DOCK2Q92608 1830 aa14.06□□□□□ -0.16
SMAD3-202ENST00000439724 C4AP0C0L4 1744 aa14.06□□□□□ -0.16
SMAD3-202ENST00000439724 C4BP0C0L5 1744 aa14.06□□□□□ -0.16
SMAD3-202ENST00000439724 LARGE1O95461 756 aa14.05□□□□□ -0.16
SMAD3-202ENST00000439724 CYP21A2P08686 494 aa14.05□□□□□ -0.16
SMAD3-202ENST00000439724 TTF1Q15361 905 aaPredicted RBP14.05□□□□□ -0.16
SMAD3-202ENST00000439724 SF3B3Q15393 1217 aaKnown RBP14.05□□□□□ -0.16
SMAD3-202ENST00000439724 CCDC102BQ68D86 513 aa14.05□□□□□ -0.16
SMAD3-202ENST00000439724 APPBP2Q92624 585 aa14.05□□□□□ -0.16
SMAD3-202ENST00000439724 M0R2C6 588 aa14.05□□□□□ -0.16
SMAD3-202ENST00000439724 HSPD1P10809 573 aaKnown RBP14.05□□□□□ -0.16
SMAD3-202ENST00000439724 SLFNL1Q499Z3 407 aa14.05□□□□□ -0.16
SMAD3-202ENST00000439724 SLC10A5Q5PT55 438 aa14.05□□□□□ -0.16
SMAD3-202ENST00000439724 ZSCAN25Q6NSZ9 544 aa14.05□□□□□ -0.16
SMAD3-202ENST00000439724 OSBP2Q969R2 916 aa14.05□□□□□ -0.16
SMAD3-202ENST00000439724 NEK1Q96PY6 1258 aa14.05□□□□□ -0.16
SMAD3-202ENST00000439724 CDC5LQ99459 802 aaKnown RBP14.05□□□□□ -0.16
SMAD3-202ENST00000439724 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.05□□□□□ -0.16
SMAD3-202ENST00000439724 WDR33Q9C0J8 1336 aaKnown RBP14.04□□□□□ -0.16
SMAD3-202ENST00000439724 GNPATO15228 680 aa14.04□□□□□ -0.16
SMAD3-202ENST00000439724 PHKA1P46020 1223 aa14.04□□□□□ -0.16
SMAD3-202ENST00000439724 ME3Q16798 604 aa14.04□□□□□ -0.16
SMAD3-202ENST00000439724 ERFEQ4G0M1 354 aa14.04□□□□□ -0.16
SMAD3-202ENST00000439724 FAM182BQ5T319 152 aa14.04□□□□□ -0.16
SMAD3-202ENST00000439724 TBC1D9BQ66K14 1250 aa14.04□□□□□ -0.16
SMAD3-202ENST00000439724 PI16Q6UXB8 463 aa14.04□□□□□ -0.16
SMAD3-202ENST00000439724 SEPT12Q8IYM1 358 aa14.04□□□□□ -0.16
SMAD3-202ENST00000439724 RTCBQ9Y3I0 505 aaKnown RBP14.04□□□□□ -0.16
SMAD3-202ENST00000439724 COL4A1P02462 1669 aa14.03□□□□□ -0.16
SMAD3-202ENST00000439724 MYO5AQ9Y4I1 1855 aaKnown RBP14.03□□□□□ -0.16
SMAD3-202ENST00000439724 HMGB1P09429 215 aaKnown RBP14.03□□□□□ -0.16
SMAD3-202ENST00000439724 ADD2P35612 726 aa14.03□□□□□ -0.16
SMAD3-202ENST00000439724 ST3GAL1Q11201 340 aa14.03□□□□□ -0.16
SMAD3-202ENST00000439724 COL9A3Q14050 684 aaPredicted RBP14.03□□□□□ -0.16
SMAD3-202ENST00000439724 TOB2Q14106 344 aaPredicted RBP14.03□□□□□ -0.16
SMAD3-202ENST00000439724 HELBQ8NG08 1087 aaPredicted RBP14.03□□□□□ -0.16
SMAD3-202ENST00000439724 LARP6Q9BRS8 491 aaKnown RBP14.03□□□□□ -0.16
SMAD3-202ENST00000439724 NYXQ9GZU5 481 aa14.03□□□□□ -0.16
SMAD3-202ENST00000439724 TPCN1Q9ULQ1 816 aa14.03□□□□□ -0.16
SMAD3-202ENST00000439724 SMC3Q9UQE7 1217 aa14.03□□□□□ -0.16
SMAD3-202ENST00000439724 UBE3CQ15386 1083 aa14.02□□□□□ -0.16
SMAD3-202ENST00000439724 WASHC4Q2M389 1173 aa14.02□□□□□ -0.16
SMAD3-202ENST00000439724 MCTP1Q6DN14 999 aa14.02□□□□□ -0.16
SMAD3-202ENST00000439724 CCDC83Q8IWF9 413 aa14.02□□□□□ -0.16
SMAD3-202ENST00000439724 ZPR1O75312 459 aa14.01□□□□□ -0.17
SMAD3-202ENST00000439724 CHRNDQ07001 517 aa14.01□□□□□ -0.17
SMAD3-202ENST00000439724 KLHL40Q2TBA0 621 aa14.01□□□□□ -0.17
SMAD3-202ENST00000439724 STOX1Q6ZVD7 989 aa14.01□□□□□ -0.17
SMAD3-202ENST00000439724 BCL11BQ9C0K0 894 aaPredicted RBP14.01□□□□□ -0.17
SMAD3-202ENST00000439724 PIH1D3Q9NQM4 214 aaKnown RBP14.01□□□□□ -0.17
SMAD3-202ENST00000439724 LMBRD1Q9NUN5 540 aa14.01□□□□□ -0.17
SMAD3-202ENST00000439724 SRP68Q9UHB9 627 aaKnown RBP14.01□□□□□ -0.17
SMAD3-202ENST00000439724 CTNNA3Q9UI47 895 aa14.01□□□□□ -0.17
SMAD3-202ENST00000439724 FOXP2O15409 715 aa14□□□□□ -0.17
SMAD3-202ENST00000439724 C3orf67Q6ZVT6 689 aa14□□□□□ -0.17
SMAD3-202ENST00000439724 ANKRD18AQ8IVF6 992 aa14□□□□□ -0.17
SMAD3-202ENST00000439724 SETDB2Q96T68 719 aa14□□□□□ -0.17
SMAD3-202ENST00000439724 PDIA4P13667 645 aaKnown RBP14□□□□□ -0.17
SMAD3-202ENST00000439724 RASGRF1Q13972 1273 aa14□□□□□ -0.17
SMAD3-202ENST00000439724 AEBP2Q6ZN18 517 aaPredicted RBP14□□□□□ -0.17
SMAD3-202ENST00000439724 BICDL1Q6ZP65 573 aa14□□□□□ -0.17
SMAD3-202ENST00000439724 DHX32Q7L7V1 743 aaKnown RBP14□□□□□ -0.17
SMAD3-202ENST00000439724 SPATA5Q8NB90 893 aa14□□□□□ -0.17
SMAD3-202ENST00000439724 ARHGEF1Q92888 912 aaKnown RBP14□□□□□ -0.17
SMAD3-202ENST00000439724 TCEANC2Q96MN5 208 aa14□□□□□ -0.17
SMAD3-202ENST00000439724 PUS7LQ9H0K6 701 aaKnown RBP14□□□□□ -0.17
SMAD3-202ENST00000439724 BSDC1Q9NW68 430 aaPredicted RBP14□□□□□ -0.17
SMAD3-202ENST00000439724 TAF1P21675 1872 aa13.99□□□□□ -0.17
SMAD3-202ENST00000439724 UBR3Q6ZT12 1888 aa13.99□□□□□ -0.17
SMAD3-202ENST00000439724 BRWD3Q6RI45 1802 aa13.99□□□□□ -0.17
SMAD3-202ENST00000439724 E7EWF7 191 aa13.99□□□□□ -0.17
SMAD3-202ENST00000439724 GPAA1O43292 621 aa13.99□□□□□ -0.17
SMAD3-202ENST00000439724 STX6O43752 255 aa13.99□□□□□ -0.17
SMAD3-202ENST00000439724 SYT1P21579 422 aa13.99□□□□□ -0.17
SMAD3-202ENST00000439724 GJB2P29033 226 aa13.99□□□□□ -0.17
SMAD3-202ENST00000439724 GTF2E1P29083 439 aaPredicted RBP13.99□□□□□ -0.17
SMAD3-202ENST00000439724 EXOSC10Q01780 885 aaKnown RBP13.99□□□□□ -0.17
SMAD3-202ENST00000439724 SLC9C2Q5TAH2 1124 aa13.99□□□□□ -0.17
SMAD3-202ENST00000439724 SMIM5Q71RC9 77 aa13.99□□□□□ -0.17
SMAD3-202ENST00000439724 NBPF5PQ86XG9 351 aaPredicted RBP13.99□□□□□ -0.17
SMAD3-202ENST00000439724 AGXT2Q9BYV1 514 aa13.99□□□□□ -0.17
SMAD3-202ENST00000439724 QTRT2Q9H974 415 aaKnown RBP13.99□□□□□ -0.17
SMAD3-202ENST00000439724 TCRBV5S4A2TA0A5A2 114 aa13.98□□□□□ -0.17
SMAD3-202ENST00000439724 FSD2A1L4K1 749 aa13.98□□□□□ -0.17
SMAD3-202ENST00000439724 IDH1O75874 414 aaKnown RBP13.98□□□□□ -0.17
SMAD3-202ENST00000439724 ZSCAN22P10073 491 aaPredicted RBP13.98□□□□□ -0.17
SMAD3-202ENST00000439724 PDE6AP16499 860 aa13.98□□□□□ -0.17
SMAD3-202ENST00000439724 ADRA2BP18089 450 aa13.98□□□□□ -0.17
SMAD3-202ENST00000439724 UBE4AQ14139 1066 aa13.98□□□□□ -0.17
SMAD3-202ENST00000439724 IMMTQ16891 758 aaKnown RBP13.98□□□□□ -0.17
SMAD3-202ENST00000439724 FOXD4L5Q5VV16 416 aaPredicted RBP13.98□□□□□ -0.17
SMAD3-202ENST00000439724 TPTE2Q6XPS3 522 aa13.98□□□□□ -0.17
SMAD3-202ENST00000439724 Q6ZUG5 572 aa13.98□□□□□ -0.17
SMAD3-202ENST00000439724 AMIGO3Q86WK7 504 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 271.1 ms