RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 RABL6Q3YEC7 729 aaPredicted RBP17.88■□□□□ 0.45
CDC42EP4-202ENST00000439510 STOX1Q6ZVD7 989 aa17.88■□□□□ 0.45
CDC42EP4-202ENST00000439510 DHX40Q8IX18 779 aaKnown RBP17.88■□□□□ 0.45
CDC42EP4-202ENST00000439510 SEC62Q99442 399 aaKnown RBP17.88■□□□□ 0.45
CDC42EP4-202ENST00000439510 NLRP2Q9NX02 1062 aa17.88■□□□□ 0.45
CDC42EP4-202ENST00000439510 SALL1Q9NSC2 1324 aa17.88■□□□□ 0.45
CDC42EP4-202ENST00000439510 ABCA3Q99758 1704 aa17.87■□□□□ 0.45
CDC42EP4-202ENST00000439510 FAM160A1Q05DH4 1040 aa17.87■□□□□ 0.45
CDC42EP4-202ENST00000439510 ZNF790Q6PG37 636 aa17.87■□□□□ 0.45
CDC42EP4-202ENST00000439510 DHX32Q7L7V1 743 aaKnown RBP17.87■□□□□ 0.45
CDC42EP4-202ENST00000439510 XAGE3Q8WTP9 111 aa17.87■□□□□ 0.45
CDC42EP4-202ENST00000439510 MYD88Q99836 296 aa17.87■□□□□ 0.45
CDC42EP4-202ENST00000439510 ERBB3P21860 1342 aa17.87■□□□□ 0.45
CDC42EP4-202ENST00000439510 PHLPP1O60346 1717 aa17.87■□□□□ 0.45
CDC42EP4-202ENST00000439510 ABCC6O95255 1503 aa17.87■□□□□ 0.45
CDC42EP4-202ENST00000439510 CHGBP05060 677 aa17.87■□□□□ 0.45
CDC42EP4-202ENST00000439510 CEBPZQ03701 1054 aaKnown RBP17.87■□□□□ 0.45
CDC42EP4-202ENST00000439510 CCDC73Q6ZRK6 1079 aa17.87■□□□□ 0.45
CDC42EP4-202ENST00000439510 ANO10Q9NW15 660 aa17.87■□□□□ 0.45
CDC42EP4-202ENST00000439510 ARFGEF2Q9Y6D5 1785 aa17.86■□□□□ 0.45
CDC42EP4-202ENST00000439510 PALLDQ8WX93 1383 aa17.86■□□□□ 0.45
CDC42EP4-202ENST00000439510 CCZ1BP86790 482 aa17.86■□□□□ 0.45
CDC42EP4-202ENST00000439510 CCZ1P86791 482 aaPredicted RBP17.86■□□□□ 0.45
CDC42EP4-202ENST00000439510 ARID5BQ14865 1188 aa17.86■□□□□ 0.45
CDC42EP4-202ENST00000439510 DDX41Q9UJV9 622 aaKnown RBP17.86■□□□□ 0.45
CDC42EP4-202ENST00000439510 NDUFB9Q9Y6M9 179 aa17.86■□□□□ 0.45
CDC42EP4-202ENST00000439510 COL18A1P39060 1754 aa17.86■□□□□ 0.45
CDC42EP4-202ENST00000439510 PTPDC1A2A3K4 754 aa17.86■□□□□ 0.45
CDC42EP4-202ENST00000439510 USP27XA6NNY8 438 aa17.86■□□□□ 0.45
CDC42EP4-202ENST00000439510 SKILP12757 684 aa17.86■□□□□ 0.45
CDC42EP4-202ENST00000439510 ZNF396Q96N95 335 aaPredicted RBP17.86■□□□□ 0.45
CDC42EP4-202ENST00000439510 USP28Q96RU2 1077 aa17.86■□□□□ 0.45
CDC42EP4-202ENST00000439510 LRRC2Q9BYS8 371 aa17.86■□□□□ 0.45
CDC42EP4-202ENST00000439510 FTOQ9C0B1 505 aaKnown RBP eCLIP17.86■□□□□ 0.45
CDC42EP4-202ENST00000439510 KINO60870 393 aaKnown RBP17.85■□□□□ 0.45
CDC42EP4-202ENST00000439510 EXOSC10Q01780 885 aaKnown RBP17.85■□□□□ 0.45
CDC42EP4-202ENST00000439510 COPS6Q7L5N1 327 aa17.85■□□□□ 0.45
CDC42EP4-202ENST00000439510 LRP10Q7Z4F1 713 aa17.85■□□□□ 0.45
CDC42EP4-202ENST00000439510 KBTBD3Q8NAB2 608 aa17.85■□□□□ 0.45
CDC42EP4-202ENST00000439510 DNAJC2Q99543 621 aaKnown RBP17.85■□□□□ 0.45
CDC42EP4-202ENST00000439510 DBNDD2Q9BQY9 259 aa17.85■□□□□ 0.45
CDC42EP4-202ENST00000439510 BECN2A8MW95 431 aa17.85■□□□□ 0.45
CDC42EP4-202ENST00000439510 NAA30Q147X3 362 aaPredicted RBP17.85■□□□□ 0.45
CDC42EP4-202ENST00000439510 TICAM2Q86XR7 235 aa17.85■□□□□ 0.45
CDC42EP4-202ENST00000439510 MYL6BP14649 208 aa17.85■□□□□ 0.45
CDC42EP4-202ENST00000439510 PTPN14Q15678 1187 aa17.85■□□□□ 0.45
CDC42EP4-202ENST00000439510 CCDC69A6NI79 296 aa17.84■□□□□ 0.45
CDC42EP4-202ENST00000439510 DSCC1Q9BVC3 393 aa17.84■□□□□ 0.45
CDC42EP4-202ENST00000439510 STRN4Q9NRL3 753 aa17.84■□□□□ 0.45
CDC42EP4-202ENST00000439510 USP16Q9Y5T5 823 aa17.84■□□□□ 0.45
CDC42EP4-202ENST00000439510 CEP57L1Q8IYX8 460 aa17.84■□□□□ 0.45
CDC42EP4-202ENST00000439510 MORC2Q9Y6X9 1032 aaPredicted RBP17.84■□□□□ 0.45
CDC42EP4-202ENST00000439510 KDM6AO15550 1401 aaPredicted RBP17.84■□□□□ 0.45
CDC42EP4-202ENST00000439510 APOBRQ0VD83 1088 aa17.83■□□□□ 0.45
CDC42EP4-202ENST00000439510 ANKRD13DQ6ZTN6 518 aa17.83■□□□□ 0.45
CDC42EP4-202ENST00000439510 DDX46Q7L014 1031 aaKnown RBP17.83■□□□□ 0.45
CDC42EP4-202ENST00000439510 ILDR1Q86SU0 546 aaPredicted RBP17.83■□□□□ 0.45
CDC42EP4-202ENST00000439510 SLC52A2Q9HAB3 445 aa17.83■□□□□ 0.45
CDC42EP4-202ENST00000439510 HELLSQ9NRZ9 838 aa17.83■□□□□ 0.45
CDC42EP4-202ENST00000439510 AHDC1Q5TGY3 1603 aaPredicted RBP17.83■□□□□ 0.44
CDC42EP4-202ENST00000439510 NUTM2BA6NNL0 878 aaPredicted RBP17.83■□□□□ 0.44
CDC42EP4-202ENST00000439510 NUTM2EB1AL46 878 aaPredicted RBP17.83■□□□□ 0.44
CDC42EP4-202ENST00000439510 SLC39A6Q13433 755 aa17.83■□□□□ 0.44
CDC42EP4-202ENST00000439510 NUTM2AQ8IVF1 878 aaPredicted RBP17.83■□□□□ 0.44
CDC42EP4-202ENST00000439510 CCAR2Q8N163 923 aaKnown RBP17.83■□□□□ 0.44
CDC42EP4-202ENST00000439510 KIF18AQ8NI77 898 aa17.83■□□□□ 0.44
CDC42EP4-202ENST00000439510 FSIP1Q8NA03 581 aa17.82■□□□□ 0.44
CDC42EP4-202ENST00000439510 ZNF592Q92610 1267 aa17.82■□□□□ 0.44
CDC42EP4-202ENST00000439510 NAT10Q9H0A0 1025 aaKnown RBP17.82■□□□□ 0.44
CDC42EP4-202ENST00000439510 OSBPL5Q9H0X9 879 aaPredicted RBP17.82■□□□□ 0.44
CDC42EP4-202ENST00000439510 ADAMTS2O95450 1211 aa17.82■□□□□ 0.44
CDC42EP4-202ENST00000439510 GSDMDP57764 484 aa17.82■□□□□ 0.44
CDC42EP4-202ENST00000439510 GABPB1Q06547 395 aaPredicted RBP17.82■□□□□ 0.44
CDC42EP4-202ENST00000439510 FMR1NBQ8N0W7 255 aaPredicted RBP17.82■□□□□ 0.44
CDC42EP4-202ENST00000439510 ZNF274Q96GC6 653 aaPredicted RBP17.82■□□□□ 0.44
CDC42EP4-202ENST00000439510 SPEF2Q9C093 1822 aa17.81■□□□□ 0.44
CDC42EP4-202ENST00000439510 ME1P48163 572 aa17.81■□□□□ 0.44
CDC42EP4-202ENST00000439510 UBE3BQ7Z3V4 1068 aa17.81■□□□□ 0.44
CDC42EP4-202ENST00000439510 FILIP1Q7Z7B0 1213 aa17.81■□□□□ 0.44
CDC42EP4-202ENST00000439510 ZNF397Q8NF99 534 aaPredicted RBP17.81■□□□□ 0.44
CDC42EP4-202ENST00000439510 CERKQ8TCT0 537 aa17.81■□□□□ 0.44
CDC42EP4-202ENST00000439510 IMPACTQ9P2X3 320 aa17.81■□□□□ 0.44
CDC42EP4-202ENST00000439510 ZNF215Q9UL58 517 aaPredicted RBP17.81■□□□□ 0.44
CDC42EP4-202ENST00000439510 CPDO75976 1380 aa17.81■□□□□ 0.44
CDC42EP4-202ENST00000439510 CARMIL3Q8ND23 1372 aa17.81■□□□□ 0.44
CDC42EP4-202ENST00000439510 KIF2AO00139 706 aaPredicted RBP17.81■□□□□ 0.44
CDC42EP4-202ENST00000439510 TULP1O00294 542 aaPredicted RBP17.81■□□□□ 0.44
CDC42EP4-202ENST00000439510 NBPF11Q86T75 865 aa17.81■□□□□ 0.44
CDC42EP4-202ENST00000439510 FBXL16Q8N461 479 aa17.81■□□□□ 0.44
CDC42EP4-202ENST00000439510 AOPEPQ8N6M6 819 aa17.81■□□□□ 0.44
CDC42EP4-202ENST00000439510 MRPS27Q92552 414 aaKnown RBP17.81■□□□□ 0.44
CDC42EP4-202ENST00000439510 CHMP4CQ96CF2 233 aa17.81■□□□□ 0.44
CDC42EP4-202ENST00000439510 RTEL1Q9NZ71 1219 aa17.81■□□□□ 0.44
CDC42EP4-202ENST00000439510 COL16A1Q07092 1604 aaPredicted RBP17.8■□□□□ 0.44
CDC42EP4-202ENST00000439510 A0A1W2PQ27 194 aa17.8■□□□□ 0.44
CDC42EP4-202ENST00000439510 A0A1W2PQ64 194 aa17.8■□□□□ 0.44
CDC42EP4-202ENST00000439510 A0A1W2PQD8 194 aa17.8■□□□□ 0.44
CDC42EP4-202ENST00000439510 PDIA3P30101 505 aaKnown RBP17.8■□□□□ 0.44
CDC42EP4-202ENST00000439510 FOSBP53539 338 aa17.8■□□□□ 0.44
CDC42EP4-202ENST00000439510 CASP7P55210 303 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms