RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 FBXO18Q8NFZ0 1043 aa18.29■□□□□ 0.52
DHFR-201ENST00000439211 CCDC102AQ96A19 550 aa18.29■□□□□ 0.52
DHFR-201ENST00000439211 RDXP35241 583 aaKnown RBP18.29■□□□□ 0.52
DHFR-201ENST00000439211 MUM1L1Q5H9M0 696 aa18.29■□□□□ 0.52
DHFR-201ENST00000439211 BRF1Q92994 677 aa18.29■□□□□ 0.52
DHFR-201ENST00000439211 FMNL2Q96PY5 1086 aa18.29■□□□□ 0.52
DHFR-201ENST00000439211 USP27XA6NNY8 438 aa18.29■□□□□ 0.52
DHFR-201ENST00000439211 GCP02774 474 aa18.29■□□□□ 0.52
DHFR-201ENST00000439211 CCDC129Q6ZRS4 1044 aa18.29■□□□□ 0.52
DHFR-201ENST00000439211 SDF4Q9BRK5 362 aa18.29■□□□□ 0.52
DHFR-201ENST00000439211 LIG1P18858 919 aa18.28■□□□□ 0.52
DHFR-201ENST00000439211 TTC14Q96N46 770 aa18.28■□□□□ 0.52
DHFR-201ENST00000439211 USP16Q9Y5T5 823 aa18.28■□□□□ 0.52
DHFR-201ENST00000439211 GIGYF1O75420 1035 aaPredicted RBP18.28■□□□□ 0.52
DHFR-201ENST00000439211 HSP90AB3PQ58FF7 597 aa18.28■□□□□ 0.52
DHFR-201ENST00000439211 TTC6Q86TZ1 520 aa18.28■□□□□ 0.52
DHFR-201ENST00000439211 ME1P48163 572 aa18.28■□□□□ 0.52
DHFR-201ENST00000439211 NEK1Q96PY6 1258 aa18.28■□□□□ 0.52
DHFR-201ENST00000439211 ZSWIM6Q9HCJ5 1215 aa18.28■□□□□ 0.52
DHFR-201ENST00000439211 A0A087WZG4 1122 aa18.27■□□□□ 0.52
DHFR-201ENST00000439211 PPP2R5AQ15172 486 aa18.27■□□□□ 0.52
DHFR-201ENST00000439211 WASHC4Q2M389 1173 aa18.27■□□□□ 0.52
DHFR-201ENST00000439211 SLFNL1Q499Z3 407 aa18.27■□□□□ 0.52
DHFR-201ENST00000439211 CCDC85AQ96PX6 553 aaPredicted RBP18.27■□□□□ 0.52
DHFR-201ENST00000439211 RIMBP3CA6NJZ7 1639 aa18.27■□□□□ 0.52
DHFR-201ENST00000439211 RIMBP3BA6NNM3 1639 aa18.27■□□□□ 0.52
DHFR-201ENST00000439211 RIMBP3Q9UFD9 1639 aa18.27■□□□□ 0.52
DHFR-201ENST00000439211 NFATC2IPQ8NCF5 419 aa18.27■□□□□ 0.52
DHFR-201ENST00000439211 KDRP35968 1356 aa18.27■□□□□ 0.52
DHFR-201ENST00000439211 DLG5Q8TDM6 1919 aa18.27■□□□□ 0.51
DHFR-201ENST00000439211 KINO60870 393 aaKnown RBP18.27■□□□□ 0.51
DHFR-201ENST00000439211 DIP2BQ9P265 1576 aa18.27■□□□□ 0.51
DHFR-201ENST00000439211 JAK2O60674 1132 aa18.26■□□□□ 0.51
DHFR-201ENST00000439211 ACTN2P35609 894 aa18.26■□□□□ 0.51
DHFR-201ENST00000439211 MAGEA9P43362 315 aa18.26■□□□□ 0.51
DHFR-201ENST00000439211 ARID5BQ14865 1188 aa18.26■□□□□ 0.51
DHFR-201ENST00000439211 SUFUQ9UMX1 484 aa18.26■□□□□ 0.51
DHFR-201ENST00000439211 EPB41L2O43491 1005 aaKnown RBP18.26■□□□□ 0.51
DHFR-201ENST00000439211 TPM1P09493 284 aa18.26■□□□□ 0.51
DHFR-201ENST00000439211 HOXB7P09629 217 aa18.26■□□□□ 0.51
DHFR-201ENST00000439211 ATP2B1P20020 1258 aa18.26■□□□□ 0.51
DHFR-201ENST00000439211 KRT32Q14532 448 aa18.26■□□□□ 0.51
DHFR-201ENST00000439211 SAMD1Q6SPF0 538 aaPredicted RBP18.26■□□□□ 0.51
DHFR-201ENST00000439211 CEP170BQ9Y4F5 1589 aaPredicted RBP18.26■□□□□ 0.51
DHFR-201ENST00000439211 KNDC1Q76NI1 1749 aa18.26■□□□□ 0.51
DHFR-201ENST00000439211 PHACTR2O75167 634 aa18.26■□□□□ 0.51
DHFR-201ENST00000439211 TATP17735 454 aaPredicted RBP18.26■□□□□ 0.51
DHFR-201ENST00000439211 PLA2G4AP47712 749 aa18.26■□□□□ 0.51
DHFR-201ENST00000439211 LRCH2Q5VUJ6 765 aa18.26■□□□□ 0.51
DHFR-201ENST00000439211 ORAI2Q96SN7 254 aa18.26■□□□□ 0.51
DHFR-201ENST00000439211 AGLP35573 1532 aa18.25■□□□□ 0.51
DHFR-201ENST00000439211 ANKRD13DQ6ZTN6 518 aa18.25■□□□□ 0.51
DHFR-201ENST00000439211 Q6ZUG5 572 aa18.25■□□□□ 0.51
DHFR-201ENST00000439211 FKBP4Q02790 459 aaKnown RBP eCLIP18.25■□□□□ 0.51
DHFR-201ENST00000439211 RPAINQ86UA6 219 aa18.25■□□□□ 0.51
DHFR-201ENST00000439211 LRRC8AQ8IWT6 810 aa18.25■□□□□ 0.51
DHFR-201ENST00000439211 ZNF446Q9NWS9 450 aa18.25■□□□□ 0.51
DHFR-201ENST00000439211 RPAP1Q9BWH6 1393 aaPredicted RBP18.24■□□□□ 0.51
DHFR-201ENST00000439211 ADAMTS13Q76LX8 1427 aa18.24■□□□□ 0.51
DHFR-201ENST00000439211 CHST3Q7LGC8 479 aa18.24■□□□□ 0.51
DHFR-201ENST00000439211 ZSWIM4Q9H7M6 989 aa18.24■□□□□ 0.51
DHFR-201ENST00000439211 DDX21Q9NR30 783 aaKnown RBP eCLIP18.24■□□□□ 0.51
DHFR-201ENST00000439211 CFAP45Q9UL16 551 aa18.24■□□□□ 0.51
DHFR-201ENST00000439211 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.24■□□□□ 0.51
DHFR-201ENST00000439211 CPLX1O14810 134 aa18.24■□□□□ 0.51
DHFR-201ENST00000439211 EVCP57679 992 aa18.24■□□□□ 0.51
DHFR-201ENST00000439211 TFCP2Q12800 502 aa18.24■□□□□ 0.51
DHFR-201ENST00000439211 RPS6KB1P23443 525 aa18.24■□□□□ 0.51
DHFR-201ENST00000439211 CARD6Q9BX69 1037 aa18.24■□□□□ 0.51
DHFR-201ENST00000439211 FHOD1Q9Y613 1164 aa18.24■□□□□ 0.51
DHFR-201ENST00000439211 EIF3CLB5ME19 914 aaKnown RBP18.23■□□□□ 0.51
DHFR-201ENST00000439211 SASH1O94885 1247 aa18.23■□□□□ 0.51
DHFR-201ENST00000439211 SFPQP23246 707 aaKnown RBP eCLIP18.23■□□□□ 0.51
DHFR-201ENST00000439211 SEC62Q99442 399 aaKnown RBP18.23■□□□□ 0.51
DHFR-201ENST00000439211 EIF3CQ99613 913 aaKnown RBP18.23■□□□□ 0.51
DHFR-201ENST00000439211 TM6SF1Q9BZW5 370 aa18.23■□□□□ 0.51
DHFR-201ENST00000439211 DDX19AQ9NUU7 478 aaKnown RBP18.23■□□□□ 0.51
DHFR-201ENST00000439211 SPATA31D1Q6ZQQ2 1576 aa18.23■□□□□ 0.51
DHFR-201ENST00000439211 EIF3JO75822 258 aaKnown RBP18.23■□□□□ 0.51
DHFR-201ENST00000439211 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.23■□□□□ 0.51
DHFR-201ENST00000439211 ADAM21Q9UKJ8 722 aa18.23■□□□□ 0.51
DHFR-201ENST00000439211 MCTP2Q6DN12 878 aa18.23■□□□□ 0.51
DHFR-201ENST00000439211 ZNF589Q86UQ0 364 aaPredicted RBP18.23■□□□□ 0.51
DHFR-201ENST00000439211 NECTIN1Q15223 517 aa18.22■□□□□ 0.51
DHFR-201ENST00000439211 RAB11FIP4Q86YS3 637 aa18.22■□□□□ 0.51
DHFR-201ENST00000439211 NPHP3Q7Z494 1330 aa18.22■□□□□ 0.51
DHFR-201ENST00000439211 CABP4P57796 275 aa18.22■□□□□ 0.51
DHFR-201ENST00000439211 DNAJC21Q5F1R6 531 aaKnown RBP18.22■□□□□ 0.51
DHFR-201ENST00000439211 MAP4K1Q92918 833 aa18.22■□□□□ 0.51
DHFR-201ENST00000439211 SATB1Q01826 763 aa18.21■□□□□ 0.51
DHFR-201ENST00000439211 DBNDD2Q9BQY9 259 aa18.21■□□□□ 0.51
DHFR-201ENST00000439211 TECPR2O15040 1411 aa18.21■□□□□ 0.51
DHFR-201ENST00000439211 ATF3P18847 181 aa18.21■□□□□ 0.51
DHFR-201ENST00000439211 CCDC144BQ3MJ40 725 aa18.21■□□□□ 0.51
DHFR-201ENST00000439211 LMBR1LQ6UX01 489 aa18.21■□□□□ 0.51
DHFR-201ENST00000439211 PACS2Q86VP3 889 aa18.21■□□□□ 0.51
DHFR-201ENST00000439211 CCDC144CPQ8IYA2 1237 aa18.21■□□□□ 0.51
DHFR-201ENST00000439211 SNRKQ9NRH2 765 aa18.21■□□□□ 0.51
DHFR-201ENST00000439211 HMG20BQ9P0W2 317 aa18.21■□□□□ 0.51
DHFR-201ENST00000439211 LEO1Q8WVC0 666 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms