RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 RRP36Q96EU6 259 aaKnown RBP11.77□□□□□ -0.52
SHPRH-206ENST00000438092 DDX19AQ9NUU7 478 aaKnown RBP11.77□□□□□ -0.52
SHPRH-206ENST00000438092 NPHP3Q7Z494 1330 aa11.77□□□□□ -0.52
SHPRH-206ENST00000438092 HCLS1P14317 486 aaPredicted RBP11.77□□□□□ -0.52
SHPRH-206ENST00000438092 NCBP1Q09161 790 aaKnown RBP11.77□□□□□ -0.52
SHPRH-206ENST00000438092 SNW1Q13573 536 aaKnown RBP11.77□□□□□ -0.52
SHPRH-206ENST00000438092 CCDC63Q8NA47 563 aa11.77□□□□□ -0.52
SHPRH-206ENST00000438092 DDX17Q92841 729 aaKnown RBP11.77□□□□□ -0.53
SHPRH-206ENST00000438092 NAA15Q9BXJ9 866 aaKnown RBP11.77□□□□□ -0.53
SHPRH-206ENST00000438092 DENND4BO75064 1496 aaPredicted RBP11.77□□□□□ -0.53
SHPRH-206ENST00000438092 LMTK3Q96Q04 1460 aa11.77□□□□□ -0.53
SHPRH-206ENST00000438092 LDHBP07195 334 aaKnown RBP11.77□□□□□ -0.53
SHPRH-206ENST00000438092 CCDC175P0C221 793 aa11.77□□□□□ -0.53
SHPRH-206ENST00000438092 ANO6Q4KMQ2 910 aa11.76□□□□□ -0.53
SHPRH-206ENST00000438092 PLCB3Q01970 1234 aa11.76□□□□□ -0.53
SHPRH-206ENST00000438092 PLEKHH1Q9ULM0 1364 aa11.76□□□□□ -0.53
SHPRH-206ENST00000438092 PDIA4P13667 645 aaKnown RBP11.76□□□□□ -0.53
SHPRH-206ENST00000438092 ZSCAN30Q86W11 494 aa11.76□□□□□ -0.53
SHPRH-206ENST00000438092 TMX3Q96JJ7 454 aa11.76□□□□□ -0.53
SHPRH-206ENST00000438092 DDX39AO00148 427 aaKnown RBP11.76□□□□□ -0.53
SHPRH-206ENST00000438092 ZMYND15Q9H091 742 aa11.76□□□□□ -0.53
SHPRH-206ENST00000438092 MTHFSDQ2M296 383 aaKnown RBP11.76□□□□□ -0.53
SHPRH-206ENST00000438092 TRAPPC3LQ5T215 181 aa11.76□□□□□ -0.53
SHPRH-206ENST00000438092 FCHSD1Q86WN1 690 aa11.76□□□□□ -0.53
SHPRH-206ENST00000438092 DCAF17Q5H9S7 520 aaPredicted RBP11.76□□□□□ -0.53
SHPRH-206ENST00000438092 IMPG2Q9BZV3 1241 aa11.76□□□□□ -0.53
SHPRH-206ENST00000438092 EIF4A2Q14240 407 aaKnown RBP11.75□□□□□ -0.53
SHPRH-206ENST00000438092 KANK3Q6NY19 840 aa11.75□□□□□ -0.53
SHPRH-206ENST00000438092 GIGYF2Q6Y7W6 1299 aaKnown RBP11.75□□□□□ -0.53
SHPRH-206ENST00000438092 GIMAP7Q8NHV1 300 aa11.75□□□□□ -0.53
SHPRH-206ENST00000438092 SMARCC1Q92922 1105 aaPredicted RBP11.75□□□□□ -0.53
SHPRH-206ENST00000438092 TCP10Q12799 353 aa11.75□□□□□ -0.53
SHPRH-206ENST00000438092 CAPZA3Q96KX2 299 aa11.75□□□□□ -0.53
SHPRH-206ENST00000438092 BICC1Q9H694 974 aaKnown RBP11.75□□□□□ -0.53
SHPRH-206ENST00000438092 HMG20BQ9P0W2 317 aa11.75□□□□□ -0.53
SHPRH-206ENST00000438092 AKAP4Q5JQC9 854 aa11.75□□□□□ -0.53
SHPRH-206ENST00000438092 AOPEPQ8N6M6 819 aa11.75□□□□□ -0.53
SHPRH-206ENST00000438092 TNNQ9UQP3 1299 aa11.75□□□□□ -0.53
SHPRH-206ENST00000438092 UFL1O94874 794 aa11.75□□□□□ -0.53
SHPRH-206ENST00000438092 EAPPQ56P03 285 aaPredicted RBP11.75□□□□□ -0.53
SHPRH-206ENST00000438092 GPIHBP1Q8IV16 184 aa11.75□□□□□ -0.53
SHPRH-206ENST00000438092 FAM89AQ96GI7 184 aa11.75□□□□□ -0.53
SHPRH-206ENST00000438092 CNNM2Q9H8M5 875 aa11.75□□□□□ -0.53
SHPRH-206ENST00000438092 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.74□□□□□ -0.53
SHPRH-206ENST00000438092 DTNBO60941 627 aa11.74□□□□□ -0.53
SHPRH-206ENST00000438092 NOD1Q9Y239 953 aa11.74□□□□□ -0.53
SHPRH-206ENST00000438092 RMND1Q9NWS8 449 aa11.74□□□□□ -0.53
SHPRH-206ENST00000438092 SORBS3O60504 671 aa11.74□□□□□ -0.53
SHPRH-206ENST00000438092 KRT5P13647 590 aa11.74□□□□□ -0.53
SHPRH-206ENST00000438092 MXRA7P84157 204 aa11.74□□□□□ -0.53
SHPRH-206ENST00000438092 FAM98CQ17RN3 349 aaKnown RBP11.74□□□□□ -0.53
SHPRH-206ENST00000438092 LRRC27Q9C0I9 530 aa11.74□□□□□ -0.53
SHPRH-206ENST00000438092 KRT2P35908 639 aa11.74□□□□□ -0.53
SHPRH-206ENST00000438092 DNM1Q05193 864 aaKnown RBP11.74□□□□□ -0.53
SHPRH-206ENST00000438092 MSL1Q68DK7 614 aa11.74□□□□□ -0.53
SHPRH-206ENST00000438092 MCM3P25205 808 aa11.74□□□□□ -0.53
SHPRH-206ENST00000438092 EP400NLQ6ZTU2 488 aa11.74□□□□□ -0.53
SHPRH-206ENST00000438092 C14orf93Q9H972 538 aaKnown RBP11.74□□□□□ -0.53
SHPRH-206ENST00000438092 KIAA0586Q9BVV6 1533 aa11.74□□□□□ -0.53
SHPRH-206ENST00000438092 ZSCAN22P10073 491 aaPredicted RBP11.74□□□□□ -0.53
SHPRH-206ENST00000438092 KSR2Q6VAB6 950 aa11.74□□□□□ -0.53
SHPRH-206ENST00000438092 MYCLP12524 364 aaPredicted RBP11.73□□□□□ -0.53
SHPRH-206ENST00000438092 GTF2F1P35269 517 aaKnown RBP eCLIP11.73□□□□□ -0.53
SHPRH-206ENST00000438092 KRT9P35527 623 aa11.73□□□□□ -0.53
SHPRH-206ENST00000438092 UBE2HP62256 183 aa11.73□□□□□ -0.53
SHPRH-206ENST00000438092 CEP135Q66GS9 1140 aa11.73□□□□□ -0.53
SHPRH-206ENST00000438092 PICK1Q9NRD5 415 aa11.73□□□□□ -0.53
SHPRH-206ENST00000438092 SCAF11Q99590 1463 aaKnown RBP11.73□□□□□ -0.53
SHPRH-206ENST00000438092 RBM17Q96I25 401 aaKnown RBP11.73□□□□□ -0.53
SHPRH-206ENST00000438092 ERCC3P19447 782 aa11.73□□□□□ -0.53
SHPRH-206ENST00000438092 CCDC129Q6ZRS4 1044 aa11.73□□□□□ -0.53
SHPRH-206ENST00000438092 USP48Q86UV5 1035 aa11.73□□□□□ -0.53
SHPRH-206ENST00000438092 IL15P40933 162 aaPredicted RBP11.73□□□□□ -0.53
SHPRH-206ENST00000438092 RAPGEF1Q13905 1077 aa11.73□□□□□ -0.53
SHPRH-206ENST00000438092 DNAJC25Q9H1X3 360 aa11.73□□□□□ -0.53
SHPRH-206ENST00000438092 NDC80O14777 642 aa11.72□□□□□ -0.53
SHPRH-206ENST00000438092 PPARDQ03181 441 aa11.72□□□□□ -0.53
SHPRH-206ENST00000438092 CCDC25Q86WR0 208 aa11.72□□□□□ -0.53
SHPRH-206ENST00000438092 DDX23Q9BUQ8 820 aaKnown RBP11.72□□□□□ -0.53
SHPRH-206ENST00000438092 CCNL1Q9UK58 526 aaPredicted RBP11.72□□□□□ -0.53
SHPRH-206ENST00000438092 KIF2AO00139 706 aaPredicted RBP11.72□□□□□ -0.53
SHPRH-206ENST00000438092 PSMC4P43686 418 aa11.72□□□□□ -0.53
SHPRH-206ENST00000438092 PDE1AP54750 535 aa11.72□□□□□ -0.53
SHPRH-206ENST00000438092 ZSCAN23Q3MJ62 389 aa11.72□□□□□ -0.53
SHPRH-206ENST00000438092 ZNF594Q96JF6 807 aaPredicted RBP11.72□□□□□ -0.53
SHPRH-206ENST00000438092 ZFYP08048 801 aaPredicted RBP11.72□□□□□ -0.53
SHPRH-206ENST00000438092 ZNF174Q15697 407 aa11.72□□□□□ -0.53
SHPRH-206ENST00000438092 IQCGQ9H095 443 aaKnown RBP11.72□□□□□ -0.53
SHPRH-206ENST00000438092 HSF2BPO75031 334 aa11.72□□□□□ -0.53
SHPRH-206ENST00000438092 TAF5LO75529 589 aa11.72□□□□□ -0.53
SHPRH-206ENST00000438092 IRX5P78411 483 aaPredicted RBP11.72□□□□□ -0.53
SHPRH-206ENST00000438092 LETM2Q2VYF4 491 aa11.72□□□□□ -0.53
SHPRH-206ENST00000438092 USH1GQ495M9 461 aa11.72□□□□□ -0.53
SHPRH-206ENST00000438092 TEX11Q8IYF3 940 aa11.72□□□□□ -0.53
SHPRH-206ENST00000438092 CCDC169A6NNP5 214 aa11.72□□□□□ -0.53
SHPRH-206ENST00000438092 GSDMDP57764 484 aa11.72□□□□□ -0.53
SHPRH-206ENST00000438092 CNBD1Q8NA66 436 aa11.72□□□□□ -0.53
SHPRH-206ENST00000438092 PTPDC1A2A3K4 754 aa11.72□□□□□ -0.53
SHPRH-206ENST00000438092 SH3BP5O60239 455 aa11.72□□□□□ -0.53
SHPRH-206ENST00000438092 CCDC172P0C7W6 258 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms