RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 PRDM6Q9NQX0 595 aa13.7□□□□□ -0.22
CPNE1-214ENST00000435747 TRMT112Q9UI30 125 aaKnown RBP13.7□□□□□ -0.22
CPNE1-214ENST00000435747 ZNF646O15015 1829 aaPredicted RBP13.69□□□□□ -0.22
CPNE1-214ENST00000435747 DCTN1Q14203 1278 aa13.69□□□□□ -0.22
CPNE1-214ENST00000435747 TAF7Q15545 349 aaPredicted RBP13.69□□□□□ -0.22
CPNE1-214ENST00000435747 SHISA4Q96DD7 197 aa13.69□□□□□ -0.22
CPNE1-214ENST00000435747 MIS18AQ9NYP9 233 aa13.69□□□□□ -0.22
CPNE1-214ENST00000435747 HTATSF1O43719 755 aaKnown RBP13.68□□□□□ -0.22
CPNE1-214ENST00000435747 HSP90AB3PQ58FF7 597 aa13.68□□□□□ -0.22
CPNE1-214ENST00000435747 Q7L0L9 218 aa13.68□□□□□ -0.22
CPNE1-214ENST00000435747 NLRP10Q86W26 655 aa13.68□□□□□ -0.22
CPNE1-214ENST00000435747 NKX2-3Q8TAU0 364 aa13.68□□□□□ -0.22
CPNE1-214ENST00000435747 WNT10BO00744 389 aa13.67□□□□□ -0.22
CPNE1-214ENST00000435747 UFL1O94874 794 aa13.67□□□□□ -0.22
CPNE1-214ENST00000435747 APOBEC3FQ8IUX4 373 aaKnown RBP13.67□□□□□ -0.22
CPNE1-214ENST00000435747 FZD1Q9UP38 647 aa13.67□□□□□ -0.22
CPNE1-214ENST00000435747 ERBB4Q15303 1308 aa13.66□□□□□ -0.22
CPNE1-214ENST00000435747 USP17L3A6NCW0 530 aa13.66□□□□□ -0.22
CPNE1-214ENST00000435747 USP17L4A6NCW7 530 aa13.66□□□□□ -0.22
CPNE1-214ENST00000435747 USP17L1Q7RTZ2 530 aa13.66□□□□□ -0.22
CPNE1-214ENST00000435747 OGFOD1Q8N543 542 aa13.66□□□□□ -0.22
CPNE1-214ENST00000435747 CLMNQ96JQ2 1002 aa13.66□□□□□ -0.22
CPNE1-214ENST00000435747 STAP2Q9UGK3 403 aa13.66□□□□□ -0.22
CPNE1-214ENST00000435747 SASH1O94885 1247 aa13.65□□□□□ -0.22
CPNE1-214ENST00000435747 MAP3K11Q16584 847 aa13.65□□□□□ -0.22
CPNE1-214ENST00000435747 PTPN18Q99952 460 aa13.65□□□□□ -0.22
CPNE1-214ENST00000435747 THUMPD2Q9BTF0 503 aaKnown RBP13.65□□□□□ -0.22
CPNE1-214ENST00000435747 MTMR10Q9NXD2 777 aa13.65□□□□□ -0.22
CPNE1-214ENST00000435747 ANKIB1Q9P2G1 1089 aa13.65□□□□□ -0.22
CPNE1-214ENST00000435747 GGA1Q9UJY5 639 aa13.65□□□□□ -0.22
CPNE1-214ENST00000435747 PPP1R12BO60237 982 aaPredicted RBP13.64□□□□□ -0.23
CPNE1-214ENST00000435747 EVI5O60447 810 aa13.64□□□□□ -0.23
CPNE1-214ENST00000435747 RALBP1Q15311 655 aa13.64□□□□□ -0.23
CPNE1-214ENST00000435747 MTFR1Q15390 333 aa13.64□□□□□ -0.23
CPNE1-214ENST00000435747 UBE2Q1Q7Z7E8 422 aa13.64□□□□□ -0.23
CPNE1-214ENST00000435747 PNISRQ8TF01 805 aaKnown RBP13.64□□□□□ -0.23
CPNE1-214ENST00000435747 ZFYVE28Q9HCC9 887 aa13.64□□□□□ -0.23
CPNE1-214ENST00000435747 PODXL2Q9NZ53 605 aa13.64□□□□□ -0.23
CPNE1-214ENST00000435747 COL4A1P02462 1669 aa13.63□□□□□ -0.23
CPNE1-214ENST00000435747 COL1A1P02452 1464 aaPredicted RBP13.63□□□□□ -0.23
CPNE1-214ENST00000435747 ZSWIM8A7E2V4 1837 aa13.63□□□□□ -0.23
CPNE1-214ENST00000435747 TESPA1A2RU30 521 aaPredicted RBP13.63□□□□□ -0.23
CPNE1-214ENST00000435747 UNCXA6NJT0 531 aa13.63□□□□□ -0.23
CPNE1-214ENST00000435747 GJA8P48165 433 aa13.63□□□□□ -0.23
CPNE1-214ENST00000435747 EIF4A1P60842 406 aaKnown RBP13.63□□□□□ -0.23
CPNE1-214ENST00000435747 RPS8P62241 208 aaKnown RBP13.63□□□□□ -0.23
CPNE1-214ENST00000435747 KIF22Q14807 665 aa13.63□□□□□ -0.23
CPNE1-214ENST00000435747 SF3B3Q15393 1217 aaKnown RBP13.63□□□□□ -0.23
CPNE1-214ENST00000435747 TAF1CQ15572 869 aaPredicted RBP13.63□□□□□ -0.23
CPNE1-214ENST00000435747 FARP2O94887 1054 aaPredicted RBP13.62□□□□□ -0.23
CPNE1-214ENST00000435747 GJA5P36382 358 aa13.62□□□□□ -0.23
CPNE1-214ENST00000435747 DDX10Q13206 875 aaKnown RBP13.62□□□□□ -0.23
CPNE1-214ENST00000435747 PODNQ7Z5L7 613 aa13.62□□□□□ -0.23
CPNE1-214ENST00000435747 GJB1P08034 283 aa13.61□□□□□ -0.23
CPNE1-214ENST00000435747 COL9A1P20849 921 aa13.61□□□□□ -0.23
CPNE1-214ENST00000435747 PRMT2P55345 433 aa13.61□□□□□ -0.23
CPNE1-214ENST00000435747 NFE2L2Q16236 605 aa13.61□□□□□ -0.23
CPNE1-214ENST00000435747 LRP10Q7Z4F1 713 aa13.61□□□□□ -0.23
CPNE1-214ENST00000435747 FBXW7Q969H0 707 aa13.61□□□□□ -0.23
CPNE1-214ENST00000435747 ZNF428Q96B54 188 aa13.61□□□□□ -0.23
CPNE1-214ENST00000435747 DEFB129Q9H1M3 183 aa13.61□□□□□ -0.23
CPNE1-214ENST00000435747 MYO3BQ8WXR4 1341 aa13.61□□□□□ -0.23
CPNE1-214ENST00000435747 GNRH1P01148 92 aa13.6□□□□□ -0.23
CPNE1-214ENST00000435747 IREB2P48200 963 aaKnown RBP13.6□□□□□ -0.23
CPNE1-214ENST00000435747 MXD3Q9BW11 206 aa13.6□□□□□ -0.23
CPNE1-214ENST00000435747 ARHGAP39Q9C0H5 1083 aa13.6□□□□□ -0.23
CPNE1-214ENST00000435747 SSC5DA1L4H1 1573 aa13.59□□□□□ -0.23
CPNE1-214ENST00000435747 WDHD1O75717 1129 aaPredicted RBP13.59□□□□□ -0.23
CPNE1-214ENST00000435747 ANXA1P04083 346 aa13.59□□□□□ -0.23
CPNE1-214ENST00000435747 BMP8BP34820 402 aa13.59□□□□□ -0.23
CPNE1-214ENST00000435747 MMP14P50281 582 aa13.59□□□□□ -0.23
CPNE1-214ENST00000435747 DACT2Q5SW24 774 aa13.59□□□□□ -0.23
CPNE1-214ENST00000435747 RNF208Q9H0X6 261 aa13.59□□□□□ -0.23
CPNE1-214ENST00000435747 PRUNE2Q8WUY3 3088 aa13.59□□□□□ -0.23
CPNE1-214ENST00000435747 MYBBP1AQ9BQG0 1328 aaKnown RBP13.59□□□□□ -0.23
CPNE1-214ENST00000435747 CCL5P13501 91 aa13.58□□□□□ -0.24
CPNE1-214ENST00000435747 EIF2S2P20042 333 aaKnown RBP13.58□□□□□ -0.24
CPNE1-214ENST00000435747 LACTBP83111 547 aaPredicted RBP13.58□□□□□ -0.24
CPNE1-214ENST00000435747 AIMP1Q12904 312 aaKnown RBP13.58□□□□□ -0.24
CPNE1-214ENST00000435747 PDIA6Q15084 440 aa13.58□□□□□ -0.24
CPNE1-214ENST00000435747 PROSER3Q2NL68 480 aa13.58□□□□□ -0.24
CPNE1-214ENST00000435747 LRIT3Q3SXY7 679 aa13.58□□□□□ -0.24
CPNE1-214ENST00000435747 SUPT20HL1Q3ZLR7 823 aa13.58□□□□□ -0.24
CPNE1-214ENST00000435747 COPS6Q7L5N1 327 aa13.58□□□□□ -0.24
CPNE1-214ENST00000435747 ANKRD13AQ8IZ07 590 aa13.58□□□□□ -0.24
CPNE1-214ENST00000435747 FAM89AQ96GI7 184 aa13.58□□□□□ -0.24
CPNE1-214ENST00000435747 ALPK3Q96L96 1907 aa13.58□□□□□ -0.24
CPNE1-214ENST00000435747 RPTORQ8N122 1335 aa13.58□□□□□ -0.24
CPNE1-214ENST00000435747 GRK4P32298 578 aa13.57□□□□□ -0.24
CPNE1-214ENST00000435747 BCAMP50895 628 aa13.57□□□□□ -0.24
CPNE1-214ENST00000435747 BRI3BPQ8WY22 251 aa13.57□□□□□ -0.24
CPNE1-214ENST00000435747 OPTNQ96CV9 577 aa13.57□□□□□ -0.24
CPNE1-214ENST00000435747 MS4A4AQ96JQ5 239 aa13.57□□□□□ -0.24
CPNE1-214ENST00000435747 GDF15Q99988 308 aa13.57□□□□□ -0.24
CPNE1-214ENST00000435747 PPP2R3BQ9Y5P8 575 aa13.57□□□□□ -0.24
CPNE1-214ENST00000435747 OTOFQ9HC10 1997 aa13.57□□□□□ -0.24
CPNE1-214ENST00000435747 EYSQ5T1H1 3165 aa13.57□□□□□ -0.24
CPNE1-214ENST00000435747 XDHP47989 1333 aa13.57□□□□□ -0.24
CPNE1-214ENST00000435747 ECM29Q5VYK3 1845 aa13.56□□□□□ -0.24
CPNE1-214ENST00000435747 CCL15-CCL14A0A0B4J2E2 113 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms