RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 PHLPP2Q6ZVD8 1323 aa13.37□□□□□ -0.27
HMGCS1-202ENST00000433297 ANKRD65E5RJM6 399 aa13.37□□□□□ -0.27
HMGCS1-202ENST00000433297 TPM1P09493 284 aa13.37□□□□□ -0.27
HMGCS1-202ENST00000433297 BICC1Q9H694 974 aaKnown RBP13.37□□□□□ -0.27
HMGCS1-202ENST00000433297 CLIC4Q9Y696 253 aa13.37□□□□□ -0.27
HMGCS1-202ENST00000433297 PARP3Q9Y6F1 533 aa13.37□□□□□ -0.27
HMGCS1-202ENST00000433297 TOP1P11387 765 aaKnown RBP13.37□□□□□ -0.27
HMGCS1-202ENST00000433297 PPP2R3AQ06190 1150 aa13.37□□□□□ -0.27
HMGCS1-202ENST00000433297 SRRTQ9BXP5 876 aaKnown RBP13.37□□□□□ -0.27
HMGCS1-202ENST00000433297 PREX1Q8TCU6 1659 aa13.37□□□□□ -0.27
HMGCS1-202ENST00000433297 RIMS1Q86UR5 1692 aaKnown RBP13.37□□□□□ -0.27
HMGCS1-202ENST00000433297 NLRP6P59044 892 aa13.37□□□□□ -0.27
HMGCS1-202ENST00000433297 CHMP4CQ96CF2 233 aa13.37□□□□□ -0.27
HMGCS1-202ENST00000433297 WDR24Q96S15 920 aa13.37□□□□□ -0.27
HMGCS1-202ENST00000433297 CTDNEP1O95476 244 aa13.36□□□□□ -0.27
HMGCS1-202ENST00000433297 KARSQ15046 597 aaKnown RBP13.36□□□□□ -0.27
HMGCS1-202ENST00000433297 LEKR1Q6ZMV7 388 aa13.36□□□□□ -0.27
HMGCS1-202ENST00000433297 SUCLG2Q96I99 432 aa13.36□□□□□ -0.27
HMGCS1-202ENST00000433297 TOMM22Q9NS69 142 aa13.36□□□□□ -0.27
HMGCS1-202ENST00000433297 ZNF202O95125 648 aa13.36□□□□□ -0.27
HMGCS1-202ENST00000433297 MARCKSP29966 332 aaPredicted RBP13.36□□□□□ -0.27
HMGCS1-202ENST00000433297 NAA16Q6N069 864 aaPredicted RBP13.36□□□□□ -0.27
HMGCS1-202ENST00000433297 DDX46Q7L014 1031 aaKnown RBP13.36□□□□□ -0.27
HMGCS1-202ENST00000433297 GJB4Q9NTQ9 266 aa13.36□□□□□ -0.27
HMGCS1-202ENST00000433297 RRP15Q9Y3B9 282 aaKnown RBP13.36□□□□□ -0.27
HMGCS1-202ENST00000433297 TMEM232C9JQI7 657 aa13.36□□□□□ -0.27
HMGCS1-202ENST00000433297 ZSCAN12O43309 604 aa13.36□□□□□ -0.27
HMGCS1-202ENST00000433297 PHACTR2O75167 634 aa13.36□□□□□ -0.27
HMGCS1-202ENST00000433297 MUM1L1Q5H9M0 696 aa13.36□□□□□ -0.27
HMGCS1-202ENST00000433297 ADALQ6DHV7 355 aa13.36□□□□□ -0.27
HMGCS1-202ENST00000433297 PUF60Q9UHX1 559 aaKnown RBP13.36□□□□□ -0.27
HMGCS1-202ENST00000433297 ADGRL3Q9HAR2 1447 aa13.35□□□□□ -0.27
HMGCS1-202ENST00000433297 TUBB4AP04350 444 aa13.35□□□□□ -0.27
HMGCS1-202ENST00000433297 REXO1L1PQ8IX06 675 aa13.35□□□□□ -0.27
HMGCS1-202ENST00000433297 GPR161Q8N6U8 529 aaKnown RBP13.35□□□□□ -0.27
HMGCS1-202ENST00000433297 GTF2A1P52655 376 aaPredicted RBP13.35□□□□□ -0.27
HMGCS1-202ENST00000433297 EIF4A1P60842 406 aaKnown RBP13.35□□□□□ -0.27
HMGCS1-202ENST00000433297 PROSER3Q2NL68 480 aa13.35□□□□□ -0.27
HMGCS1-202ENST00000433297 ALDH8A1Q9H2A2 487 aaPredicted RBP13.35□□□□□ -0.27
HMGCS1-202ENST00000433297 PPP2R2CQ9Y2T4 447 aa13.35□□□□□ -0.27
HMGCS1-202ENST00000433297 H3BQF6 201 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 NLRP12P59046 1061 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 SYNE3Q6ZMZ3 975 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 FBXO18Q8NFZ0 1043 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 DESI2Q9BSY9 194 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 FLT4P35916 1363 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 TMEM131LA2VDJ0 1609 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 IGSF1Q8N6C5 1336 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 DHX16O60231 1041 aaKnown RBP13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 PFKFB2O60825 505 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 LONRF2Q1L5Z9 754 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 WWC2Q6AWC2 1192 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 STOX1Q6ZVD7 989 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 ILDR1Q86SU0 546 aaPredicted RBP13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 SMARCC2Q8TAQ2 1214 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 GOLGA5Q8TBA6 731 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 CCDC12Q8WUD4 166 aaPredicted RBP13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 PDE11AQ9HCR9 933 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 DLC1Q96QB1 1528 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 VWA3AA6NCI4 1184 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 BTBD11A6QL63 1104 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 SPTLC2O15270 562 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 ADKP55263 362 aaKnown RBP13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 NCAPHQ15003 741 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 SRLQ86TD4 932 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 FUT8Q9BYC5 575 aa13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 IRX2Q9BZI1 471 aaPredicted RBP13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 U3KPZ7 1027 aaPredicted RBP13.34□□□□□ -0.27
HMGCS1-202ENST00000433297 A0A0G2JLW4 131 aa13.33□□□□□ -0.27
HMGCS1-202ENST00000433297 ALDH1L1O75891 902 aa13.33□□□□□ -0.27
HMGCS1-202ENST00000433297 MTX1Q13505 466 aa13.33□□□□□ -0.27
HMGCS1-202ENST00000433297 DHX32Q7L7V1 743 aaKnown RBP13.33□□□□□ -0.27
HMGCS1-202ENST00000433297 DHX58Q96C10 678 aa13.33□□□□□ -0.27
HMGCS1-202ENST00000433297 MPRIPQ6WCQ1 1025 aa13.33□□□□□ -0.28
HMGCS1-202ENST00000433297 GOLGA6L1Q8N7Z2 621 aa13.33□□□□□ -0.28
HMGCS1-202ENST00000433297 PRAMEF22A3QJZ6 481 aa13.33□□□□□ -0.28
HMGCS1-202ENST00000433297 ATP8B1O43520 1251 aa13.33□□□□□ -0.28
HMGCS1-202ENST00000433297 ACTN2P35609 894 aa13.33□□□□□ -0.28
HMGCS1-202ENST00000433297 LINC00301Q8NCQ3 95 aa13.33□□□□□ -0.28
HMGCS1-202ENST00000433297 LLPHQ9BRT6 129 aaKnown RBP13.33□□□□□ -0.28
HMGCS1-202ENST00000433297 PLEKHA4Q9H4M7 779 aa13.33□□□□□ -0.28
HMGCS1-202ENST00000433297 MED23Q9ULK4 1368 aa13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 GRM8O00222 908 aa13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 TSGA10IPQ3SY00 556 aa13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 TTLL5Q6EMB2 1281 aa13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 FOXR1Q6PIV2 292 aa13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 GOLGA1Q92805 767 aa13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 BAG1Q99933 345 aaPredicted RBP13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 LZTFL1Q9NQ48 299 aa13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 GPHNQ9NQX3 736 aaPredicted RBP13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 FANCLQ9NW38 375 aa13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 CEP170BQ9Y4F5 1589 aaPredicted RBP13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 TOGARAM2Q6ZUX3 1019 aa13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 STK11IPQ8N1F8 1099 aa13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 CCDC102AQ96A19 550 aa13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 C8orf76Q96K31 380 aa13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 EFCC1Q9HA90 598 aa13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 SUGCTQ9HAC7 445 aa13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 DBF4Q9UBU7 674 aaPredicted RBP13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 COL15A1P39059 1388 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms