RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 SPTLC2O15270 562 aa13.29□□□□□ -0.28
RIMKLA-202ENST00000431473 AK2P54819 239 aa13.29□□□□□ -0.28
RIMKLA-202ENST00000431473 PSMA7O14818 248 aa13.29□□□□□ -0.28
RIMKLA-202ENST00000431473 EEF2P13639 858 aaKnown RBP13.29□□□□□ -0.28
RIMKLA-202ENST00000431473 CCT6AP40227 531 aaKnown RBP13.29□□□□□ -0.28
RIMKLA-202ENST00000431473 KRT83P78385 493 aa13.29□□□□□ -0.28
RIMKLA-202ENST00000431473 KRT23Q9C075 422 aa13.29□□□□□ -0.28
RIMKLA-202ENST00000431473 ZNF219Q9P2Y4 722 aaPredicted RBP13.29□□□□□ -0.28
RIMKLA-202ENST00000431473 PRXQ9BXM0 1461 aa13.29□□□□□ -0.28
RIMKLA-202ENST00000431473 KCNK9Q9NPC2 374 aa13.29□□□□□ -0.28
RIMKLA-202ENST00000431473 HPDP32754 393 aaPredicted RBP13.29□□□□□ -0.28
RIMKLA-202ENST00000431473 PPARDQ03181 441 aa13.29□□□□□ -0.28
RIMKLA-202ENST00000431473 CFAP58Q5T655 872 aa13.29□□□□□ -0.28
RIMKLA-202ENST00000431473 LRRC27Q9C0I9 530 aa13.29□□□□□ -0.28
RIMKLA-202ENST00000431473 AK9Q5TCS8 1911 aa13.29□□□□□ -0.28
RIMKLA-202ENST00000431473 MCM7P33993 719 aa13.28□□□□□ -0.28
RIMKLA-202ENST00000431473 NAA25Q14CX7 972 aa13.28□□□□□ -0.28
RIMKLA-202ENST00000431473 ANKLE2Q86XL3 938 aa13.28□□□□□ -0.28
RIMKLA-202ENST00000431473 CFAP57Q96MR6 1250 aa13.28□□□□□ -0.28
RIMKLA-202ENST00000431473 PPP2R3AQ06190 1150 aa13.28□□□□□ -0.28
RIMKLA-202ENST00000431473 CCDC42Q96M95 316 aa13.28□□□□□ -0.28
RIMKLA-202ENST00000431473 NAP1L3Q99457 506 aaPredicted RBP13.28□□□□□ -0.28
RIMKLA-202ENST00000431473 SEC24BO95487 1268 aa13.28□□□□□ -0.28
RIMKLA-202ENST00000431473 BAG3O95817 575 aa13.28□□□□□ -0.28
RIMKLA-202ENST00000431473 GBP6Q6ZN66 633 aa13.28□□□□□ -0.28
RIMKLA-202ENST00000431473 SMC6Q96SB8 1091 aa13.28□□□□□ -0.28
RIMKLA-202ENST00000431473 RPRD2Q5VT52 1461 aaKnown RBP13.27□□□□□ -0.28
RIMKLA-202ENST00000431473 CEP83Q9Y592 693 aa13.27□□□□□ -0.28
RIMKLA-202ENST00000431473 RASSF4Q9H2L5 321 aa13.27□□□□□ -0.28
RIMKLA-202ENST00000431473 NBPF7P0C2Y1 421 aaPredicted RBP13.27□□□□□ -0.28
RIMKLA-202ENST00000431473 HS1BP3Q53T59 392 aa13.27□□□□□ -0.28
RIMKLA-202ENST00000431473 DPH6Q7L8W6 267 aa13.27□□□□□ -0.28
RIMKLA-202ENST00000431473 NMIQ13287 307 aaPredicted RBP13.27□□□□□ -0.29
RIMKLA-202ENST00000431473 SLC4A4Q9Y6R1 1079 aa13.27□□□□□ -0.29
RIMKLA-202ENST00000431473 APOBRQ0VD83 1088 aa13.27□□□□□ -0.29
RIMKLA-202ENST00000431473 ZNF354CQ86Y25 554 aa13.27□□□□□ -0.29
RIMKLA-202ENST00000431473 MAGI1Q96QZ7 1491 aaPredicted RBP13.27□□□□□ -0.29
RIMKLA-202ENST00000431473 TTC14Q96N46 770 aa13.27□□□□□ -0.29
RIMKLA-202ENST00000431473 TSGA10Q9BZW7 698 aa13.27□□□□□ -0.29
RIMKLA-202ENST00000431473 SAMD15Q9P1V8 674 aa13.27□□□□□ -0.29
RIMKLA-202ENST00000431473 U2AF2P26368 475 aaKnown RBP eCLIP13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 C17orf53Q8N3J3 647 aaPredicted RBP13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 RXRAP19793 462 aa13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 MRPS9P82933 396 aaKnown RBP13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 PPP1R7Q15435 360 aa13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 NEK11Q8NG66 645 aa13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 ERMNQ8TAM6 284 aa13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 TOPBP1Q92547 1522 aa13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 TLDC2A0PJX2 215 aa13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 CALM1P0DP23 149 aa13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 CALM2P0DP24 149 aa13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 CALM3P0DP25 149 aa13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 RSRC1Q96IZ7 334 aaKnown RBP13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 BAG1Q99933 345 aaPredicted RBP13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 CRNKL1Q9BZJ0 848 aaKnown RBP13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 C6orf229H3BNL8 230 aa13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 TTLL12Q14166 644 aaPredicted RBP13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 PLIN2Q99541 437 aa13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 EIF2AK4Q9P2K8 1649 aaKnown RBP13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 SBNO2Q9Y2G9 1366 aa13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 SEC62Q99442 399 aaKnown RBP13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 IQSEC3Q9UPP2 1182 aaPredicted RBP13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 ADGRF5Q8IZF2 1346 aa13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 VAV2P52735 878 aa13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 EVCP57679 992 aa13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 RUFY3Q7L099 469 aa13.26□□□□□ -0.29
RIMKLA-202ENST00000431473 TTC21BQ7Z4L5 1316 aa13.25□□□□□ -0.29
RIMKLA-202ENST00000431473 PRPHP41219 470 aa13.25□□□□□ -0.29
RIMKLA-202ENST00000431473 CTNND2Q9UQB3 1225 aa13.25□□□□□ -0.29
RIMKLA-202ENST00000431473 DNMBPQ6XZF7 1577 aa13.25□□□□□ -0.29
RIMKLA-202ENST00000431473 KRT2P35908 639 aa13.25□□□□□ -0.29
RIMKLA-202ENST00000431473 A0A1B0GVL5 298 aa13.25□□□□□ -0.29
RIMKLA-202ENST00000431473 PLCB3Q01970 1234 aa13.25□□□□□ -0.29
RIMKLA-202ENST00000431473 AKNAD1Q5T1N1 836 aa13.25□□□□□ -0.29
RIMKLA-202ENST00000431473 NAPAP54920 295 aa13.25□□□□□ -0.29
RIMKLA-202ENST00000431473 CCDC77Q9BR77 488 aa13.25□□□□□ -0.29
RIMKLA-202ENST00000431473 PABPN1LA6NDY0 278 aaKnown RBP13.25□□□□□ -0.29
RIMKLA-202ENST00000431473 RABEP2Q9H5N1 569 aa13.25□□□□□ -0.29
RIMKLA-202ENST00000431473 CNNM2Q9H8M5 875 aa13.25□□□□□ -0.29
RIMKLA-202ENST00000431473 PAG1Q9NWQ8 432 aa13.25□□□□□ -0.29
RIMKLA-202ENST00000431473 ESR2Q92731 530 aa13.25□□□□□ -0.29
RIMKLA-202ENST00000431473 NSD2O96028 1365 aa13.25□□□□□ -0.29
RIMKLA-202ENST00000431473 RAB3IL1Q8TBN0 382 aa13.24□□□□□ -0.29
RIMKLA-202ENST00000431473 AFAP1L1Q8TED9 768 aa13.24□□□□□ -0.29
RIMKLA-202ENST00000431473 NOS1P29475 1434 aa13.24□□□□□ -0.29
RIMKLA-202ENST00000431473 CDC5LQ99459 802 aaKnown RBP13.24□□□□□ -0.29
RIMKLA-202ENST00000431473 RNASE9P60153 205 aaKnown RBP13.24□□□□□ -0.29
RIMKLA-202ENST00000431473 CCDC122Q5T0U0 273 aa13.24□□□□□ -0.29
RIMKLA-202ENST00000431473 LMBR1Q8WVP7 490 aa13.24□□□□□ -0.29
RIMKLA-202ENST00000431473 MAP7D1Q3KQU3 841 aa13.24□□□□□ -0.29
RIMKLA-202ENST00000431473 CREB3L3Q68CJ9 461 aa13.24□□□□□ -0.29
RIMKLA-202ENST00000431473 SSX2IPQ9Y2D8 614 aa13.24□□□□□ -0.29
RIMKLA-202ENST00000431473 IL16Q14005 1332 aa13.24□□□□□ -0.29
RIMKLA-202ENST00000431473 RIOK3O14730 519 aaKnown RBP13.24□□□□□ -0.29
RIMKLA-202ENST00000431473 ATP2A1O14983 1001 aa13.24□□□□□ -0.29
RIMKLA-202ENST00000431473 BMP15O95972 392 aa13.24□□□□□ -0.29
RIMKLA-202ENST00000431473 HLA-DOAP06340 250 aa13.24□□□□□ -0.29
RIMKLA-202ENST00000431473 WASLO00401 505 aaPredicted RBP13.23□□□□□ -0.29
RIMKLA-202ENST00000431473 CYP7A1P22680 504 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms