RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 LRRC41Q15345 812 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 TAF1CQ15572 869 aaPredicted RBP6.15□□□□□ -1.42
PTPN4-203ENST00000430976 CCDC121Q6ZUS5 278 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 KIAA1328Q86T90 577 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 WDR66Q8TBY9 1149 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 CDHR1Q96JP9 859 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 OSBPL10Q9BXB5 764 aa6.15□□□□□ -1.42
PTPN4-203ENST00000430976 BICC1Q9H694 974 aaKnown RBP6.15□□□□□ -1.42
PTPN4-203ENST00000430976 TRIM64A6NGJ6 449 aa6.15□□□□□ -1.43
PTPN4-203ENST00000430976 TRIM64BA6NI03 449 aa6.15□□□□□ -1.43
PTPN4-203ENST00000430976 TNNI2P48788 182 aa6.15□□□□□ -1.43
PTPN4-203ENST00000430976 NSUN2Q08J23 767 aaKnown RBP eCLIP6.15□□□□□ -1.43
PTPN4-203ENST00000430976 PSMD6Q15008 389 aa6.15□□□□□ -1.43
PTPN4-203ENST00000430976 PLCB4Q15147 1175 aa6.15□□□□□ -1.43
PTPN4-203ENST00000430976 Q3C1V9 767 aa6.15□□□□□ -1.43
PTPN4-203ENST00000430976 PLEKHG6Q3KR16 790 aa6.15□□□□□ -1.43
PTPN4-203ENST00000430976 ESCO1Q5FWF5 840 aa6.15□□□□□ -1.43
PTPN4-203ENST00000430976 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.15□□□□□ -1.43
PTPN4-203ENST00000430976 RPAP3Q9H6T3 665 aaPredicted RBP6.15□□□□□ -1.43
PTPN4-203ENST00000430976 DISC1Q9NRI5 854 aa6.15□□□□□ -1.43
PTPN4-203ENST00000430976 SEPT10Q9P0V9 454 aa6.15□□□□□ -1.43
PTPN4-203ENST00000430976 SLC4A7Q9Y6M7 1214 aa6.15□□□□□ -1.43
PTPN4-203ENST00000430976 SCG2P13521 617 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 WDR43Q15061 677 aaKnown RBP eCLIP6.14□□□□□ -1.43
PTPN4-203ENST00000430976 SWT1Q5T5J6 900 aaKnown RBP6.14□□□□□ -1.43
PTPN4-203ENST00000430976 SUN5Q8TC36 379 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 PTPRHQ9HD43 1115 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 SSX2IPQ9Y2D8 614 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 A0A1B0GUA9 196 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 KRT18P05783 430 aaKnown RBP6.14□□□□□ -1.43
PTPN4-203ENST00000430976 SCNN1AP37088 669 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 TRPC1P48995 793 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 CLK1P49759 484 aaKnown RBP6.14□□□□□ -1.43
PTPN4-203ENST00000430976 CLNS1AP54105 237 aaKnown RBP6.14□□□□□ -1.43
PTPN4-203ENST00000430976 COL19A1Q14993 1142 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 KRT72Q14CN4 511 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 CCDC158Q5M9N0 1113 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 CAPRIN2Q6IMN6 1127 aaKnown RBP6.14□□□□□ -1.43
PTPN4-203ENST00000430976 CCDC186Q7Z3E2 898 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 MYOCDQ8IZQ8 938 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 ABCG4Q9H172 646 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 PCDHGA4Q9Y5G9 962 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 SART1O43290 800 aaKnown RBP6.14□□□□□ -1.43
PTPN4-203ENST00000430976 TRIM37O94972 964 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 AGR2O95994 175 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 KIF5BP33176 963 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 GNPTABQ3T906 1256 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 KAZNQ674X7 775 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 UNC5DQ6UXZ4 953 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 GATAD2AQ86YP4 633 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 CHPFQ8IZ52 775 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.14□□□□□ -1.43
PTPN4-203ENST00000430976 ZNF24P17028 368 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 ATF3P18847 181 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 RPS6KA3P51812 740 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 POLA2Q14181 598 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.14□□□□□ -1.43
PTPN4-203ENST00000430976 ZNF280CQ8ND82 737 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 AP1M1Q9BXS5 423 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 TEX13AQ9BXU3 409 aaPredicted RBP6.14□□□□□ -1.43
PTPN4-203ENST00000430976 MMADHCQ9H3L0 296 aaPredicted RBP6.14□□□□□ -1.43
PTPN4-203ENST00000430976 HDAC6Q9UBN7 1215 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 MYO6Q9UM54 1294 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 USTQ9Y2C2 406 aa6.14□□□□□ -1.43
PTPN4-203ENST00000430976 SPTLC2O15270 562 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 DIAPH1O60610 1272 aaKnown RBP6.13□□□□□ -1.43
PTPN4-203ENST00000430976 PREPLQ4J6C6 727 aaPredicted RBP6.13□□□□□ -1.43
PTPN4-203ENST00000430976 TSHZ3Q63HK5 1081 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 SYT10Q6XYQ8 523 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 FAM161BQ96MY7 647 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 GDPD2Q9HCC8 539 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 ABCF3Q9NUQ8 709 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 CLIP2Q9UDT6 1046 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 VTI1BQ9UEU0 232 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.13□□□□□ -1.43
PTPN4-203ENST00000430976 ENO4A6NNW6 628 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 GTPBP6O43824 516 aaPredicted RBP6.13□□□□□ -1.43
PTPN4-203ENST00000430976 EIF5P55010 431 aaKnown RBP6.13□□□□□ -1.43
PTPN4-203ENST00000430976 MRPS35P82673 323 aaKnown RBP6.13□□□□□ -1.43
PTPN4-203ENST00000430976 ITIH3Q06033 890 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 EIF2B5Q13144 721 aaKnown RBP6.13□□□□□ -1.43
PTPN4-203ENST00000430976 FILIP1LQ4L180 1135 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 NOP9Q86U38 636 aaKnown RBP6.13□□□□□ -1.43
PTPN4-203ENST00000430976 C7orf57Q8NEG2 295 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 CCDC68Q9H2F9 335 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 PLSCR2Q9NRY7 297 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 NLRP2Q9NX02 1062 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 ODF2LQ9ULJ1 636 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 RAD54L2Q9Y4B4 1467 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 TULP2O00295 520 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 MUSKO15146 869 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 NDUFB5O43674 189 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 KRT20P35900 424 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 PARP10Q53GL7 1025 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 ANKRD45Q5TZF3 282 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 GALNT17Q6IS24 598 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 OTUD6AQ7L8S5 288 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 JAZF1Q86VZ6 243 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 NELL1Q92832 810 aa6.13□□□□□ -1.43
PTPN4-203ENST00000430976 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms