RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 CHURC1Q8WUH1 139 aa6.77□□□□□ -1.33
UBR3-204ENST00000430321 DDX21Q9NR30 783 aaKnown RBP eCLIP6.77□□□□□ -1.33
UBR3-204ENST00000430321 PNMA3Q9UL41 463 aa6.77□□□□□ -1.33
UBR3-204ENST00000430321 NSFL1CQ9UNZ2 370 aaKnown RBP6.77□□□□□ -1.33
UBR3-204ENST00000430321 FAM135BQ49AJ0 1406 aa6.77□□□□□ -1.33
UBR3-204ENST00000430321 STX10O60499 249 aa6.77□□□□□ -1.33
UBR3-204ENST00000430321 SPAG1Q07617 926 aa6.77□□□□□ -1.33
UBR3-204ENST00000430321 KMT5BQ4FZB7 885 aa6.77□□□□□ -1.33
UBR3-204ENST00000430321 FOXD4L5Q5VV16 416 aaPredicted RBP6.77□□□□□ -1.33
UBR3-204ENST00000430321 UBE3BQ7Z3V4 1068 aa6.77□□□□□ -1.33
UBR3-204ENST00000430321 MCF2L2Q86YR7 1114 aa6.77□□□□□ -1.33
UBR3-204ENST00000430321 C2CD5Q86YS7 1000 aa6.77□□□□□ -1.33
UBR3-204ENST00000430321 FOXD4L4Q8WXT5 416 aaPredicted RBP6.77□□□□□ -1.33
UBR3-204ENST00000430321 TSR2Q969E8 191 aaKnown RBP6.77□□□□□ -1.33
UBR3-204ENST00000430321 EXOC4Q96A65 974 aa6.77□□□□□ -1.33
UBR3-204ENST00000430321 JPH2Q9BR39 696 aaPredicted RBP6.77□□□□□ -1.33
UBR3-204ENST00000430321 CARD10Q9BWT7 1032 aa6.77□□□□□ -1.33
UBR3-204ENST00000430321 ZSCAN16Q9H4T2 348 aaPredicted RBP6.77□□□□□ -1.33
UBR3-204ENST00000430321 K7ELQ4 463 aaPredicted RBP6.77□□□□□ -1.33
UBR3-204ENST00000430321 METAP2P50579 478 aaKnown RBP eCLIP6.77□□□□□ -1.33
UBR3-204ENST00000430321 KIF11P52732 1056 aa6.77□□□□□ -1.33
UBR3-204ENST00000430321 CCDC14Q49A88 953 aa6.77□□□□□ -1.33
UBR3-204ENST00000430321 CCDC93Q567U6 631 aa6.77□□□□□ -1.33
UBR3-204ENST00000430321 MMP14P50281 582 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 FAM98CQ17RN3 349 aaKnown RBP6.76□□□□□ -1.33
UBR3-204ENST00000430321 GNPTABQ3T906 1256 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 ANO10Q9NW15 660 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 OVOS2A0A0G2JMS6 1433 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 OVOS2A0A0J9YW53 1432 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 OVOS2Q6IE36 1432 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 IQCA1LA6NCM1 817 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 PPIP5K2O43314 1243 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 MAP4K4O95819 1239 aaPredicted RBP6.76□□□□□ -1.33
UBR3-204ENST00000430321 PCP11498 1178 aaKnown RBP6.76□□□□□ -1.33
UBR3-204ENST00000430321 UBA7P41226 1012 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 FOSBP53539 338 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 CHMP4BP1P59074 171 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 PLS1Q14651 629 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 CWC27Q6UX04 472 aaKnown RBP6.76□□□□□ -1.33
UBR3-204ENST00000430321 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.76□□□□□ -1.33
UBR3-204ENST00000430321 ARHGAP27Q6ZUM4 889 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 COPS6Q7L5N1 327 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 CACNA2D4Q7Z3S7 1137 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 EHBP1Q8NDI1 1231 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 SLC17A8Q8NDX2 589 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 AZI2Q9H6S1 392 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 HELLSQ9NRZ9 838 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 ADGRL3Q9HAR2 1447 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 TMEM94Q12767 1356 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 HMGB3O15347 200 aaKnown RBP6.76□□□□□ -1.33
UBR3-204ENST00000430321 CNGA1P29973 690 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 SMTNP53814 917 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 GRM1Q13255 1194 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 DDX11Q96FC9 970 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 ATP10DQ9P241 1426 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 EIF3DO15371 548 aaKnown RBP eCLIP6.76□□□□□ -1.33
UBR3-204ENST00000430321 PHACTR2O75167 634 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 BCAR3O75815 825 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 GAS8O95995 478 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 PARP1P09874 1014 aaKnown RBP6.76□□□□□ -1.33
UBR3-204ENST00000430321 TEX11Q8IYF3 940 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 CERKQ8TCT0 537 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 IFT74Q96LB3 600 aa6.76□□□□□ -1.33
UBR3-204ENST00000430321 SLC52A2Q9HAB3 445 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 TARBP1Q13395 1621 aaKnown RBP6.75□□□□□ -1.33
UBR3-204ENST00000430321 GOLGA6L10A0A0M3HER8 536 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 IREB2P48200 963 aaKnown RBP6.75□□□□□ -1.33
UBR3-204ENST00000430321 DALRD3Q5D0E6 543 aaKnown RBP6.75□□□□□ -1.33
UBR3-204ENST00000430321 HAUS3Q68CZ6 603 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 MTIF3Q9H2K0 278 aaKnown RBP6.75□□□□□ -1.33
UBR3-204ENST00000430321 AOX1Q06278 1338 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 GOLGA6L9A6NEM1 432 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 GCOM1H8Y6P7 765 aaPredicted RBP6.75□□□□□ -1.33
UBR3-204ENST00000430321 MYZAPP0CAP1 466 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 RTN1Q16799 776 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 MTERF4Q7Z6M4 381 aaKnown RBP6.75□□□□□ -1.33
UBR3-204ENST00000430321 SMCR8Q8TEV9 937 aaPredicted RBP6.75□□□□□ -1.33
UBR3-204ENST00000430321 GTF3C2Q8WUA4 911 aaPredicted RBP6.75□□□□□ -1.33
UBR3-204ENST00000430321 CTAGE1Q96RT6 745 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 TCHPQ9BT92 498 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 EXOC1Q9NV70 894 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 CD2APQ9Y5K6 639 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 RNF113AO15541 343 aaKnown RBP6.75□□□□□ -1.33
UBR3-204ENST00000430321 YEATS4O95619 227 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 P4HA1P13674 534 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 CCDC40Q4G0X9 1142 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 ALS2CR12Q96Q35 445 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 IWS1Q96ST2 819 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 NAA15Q9BXJ9 866 aaKnown RBP6.75□□□□□ -1.33
UBR3-204ENST00000430321 LEMD3Q9Y2U8 911 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 ATP7BP35670 1465 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 PALM3A6NDB9 673 aaPredicted RBP6.75□□□□□ -1.33
UBR3-204ENST00000430321 NOP56O00567 594 aaKnown RBP6.75□□□□□ -1.33
UBR3-204ENST00000430321 ZSCAN12O43309 604 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 EIF3JO75822 258 aaKnown RBP6.75□□□□□ -1.33
UBR3-204ENST00000430321 CTNNA2P26232 953 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 RPL13P26373 211 aaKnown RBP6.75□□□□□ -1.33
UBR3-204ENST00000430321 NAPAP54920 295 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 MCMDC2Q4G0Z9 681 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 ATL3Q6DD88 541 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms