RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 A1BGP04217 495 aa15.67■□□□□ 0.1
SNRNP200-202ENST00000429650 ADD1P35611 737 aaKnown RBP15.67■□□□□ 0.1
SNRNP200-202ENST00000429650 NAA16Q6N069 864 aaPredicted RBP15.67■□□□□ 0.1
SNRNP200-202ENST00000429650 ZNF594Q96JF6 807 aaPredicted RBP15.67■□□□□ 0.1
SNRNP200-202ENST00000429650 SPEF2Q9C093 1822 aa15.67■□□□□ 0.1
SNRNP200-202ENST00000429650 MAST3O60307 1309 aa15.67■□□□□ 0.1
SNRNP200-202ENST00000429650 PTPDC1A2A3K4 754 aa15.66■□□□□ 0.1
SNRNP200-202ENST00000429650 IFIT1P09914 478 aaKnown RBP15.66■□□□□ 0.1
SNRNP200-202ENST00000429650 HMGN5P82970 282 aaKnown RBP15.66■□□□□ 0.1
SNRNP200-202ENST00000429650 CCDC191Q8NCU4 936 aa15.66■□□□□ 0.1
SNRNP200-202ENST00000429650 KCPQ6ZWJ8 1503 aa15.66■□□□□ 0.1
SNRNP200-202ENST00000429650 PCDH11XQ9BZA7 1347 aa15.66■□□□□ 0.1
SNRNP200-202ENST00000429650 PCDH11YQ9BZA8 1340 aa15.66■□□□□ 0.1
SNRNP200-202ENST00000429650 A0A1B0GUL7 405 aa15.66■□□□□ 0.1
SNRNP200-202ENST00000429650 E7EWF7 191 aa15.66■□□□□ 0.1
SNRNP200-202ENST00000429650 TDRD7Q8NHU6 1098 aaKnown RBP15.66■□□□□ 0.1
SNRNP200-202ENST00000429650 ZBTB3Q9H5J0 574 aa15.66■□□□□ 0.1
SNRNP200-202ENST00000429650 RNF113AO15541 343 aaKnown RBP15.65■□□□□ 0.1
SNRNP200-202ENST00000429650 CIAO1O76071 339 aa15.65■□□□□ 0.1
SNRNP200-202ENST00000429650 PTGS1P23219 599 aa15.65■□□□□ 0.1
SNRNP200-202ENST00000429650 CCT2P78371 535 aaKnown RBP15.65■□□□□ 0.1
SNRNP200-202ENST00000429650 CEBPZQ03701 1054 aaKnown RBP15.65■□□□□ 0.1
SNRNP200-202ENST00000429650 ZCRB1Q8TBF4 217 aaKnown RBP15.65■□□□□ 0.1
SNRNP200-202ENST00000429650 DNAJC25Q9H1X3 360 aa15.65■□□□□ 0.1
SNRNP200-202ENST00000429650 ATG3Q9NT62 314 aa15.65■□□□□ 0.1
SNRNP200-202ENST00000429650 SALL1Q9NSC2 1324 aa15.65■□□□□ 0.1
SNRNP200-202ENST00000429650 ERVV-2B6SEH9 535 aa15.64■□□□□ 0.1
SNRNP200-202ENST00000429650 GTF2F1P35269 517 aaKnown RBP eCLIP15.64■□□□□ 0.1
SNRNP200-202ENST00000429650 ZNF165P49910 485 aa15.64■□□□□ 0.1
SNRNP200-202ENST00000429650 FOSBP53539 338 aa15.64■□□□□ 0.1
SNRNP200-202ENST00000429650 CADPS2Q86UW7 1296 aa15.64■□□□□ 0.1
SNRNP200-202ENST00000429650 PUS3Q9BZE2 481 aaKnown RBP15.64■□□□□ 0.1
SNRNP200-202ENST00000429650 RCOR1Q9UKL0 485 aa15.64■□□□□ 0.1
SNRNP200-202ENST00000429650 KIF3AQ9Y496 699 aa15.64■□□□□ 0.1
SNRNP200-202ENST00000429650 PAPPAQ13219 1627 aa15.64■□□□□ 0.09
SNRNP200-202ENST00000429650 MTERF4Q7Z6M4 381 aaKnown RBP15.64■□□□□ 0.09
SNRNP200-202ENST00000429650 PLA2G4DQ86XP0 818 aa15.64■□□□□ 0.09
SNRNP200-202ENST00000429650 FTOQ9C0B1 505 aaKnown RBP eCLIP15.64■□□□□ 0.09
SNRNP200-202ENST00000429650 NCOA5Q9HCD5 579 aaKnown RBP15.64■□□□□ 0.09
SNRNP200-202ENST00000429650 NAP1L2Q9ULW6 460 aaPredicted RBP15.64■□□□□ 0.09
SNRNP200-202ENST00000429650 M0R2C6 588 aa15.64■□□□□ 0.09
SNRNP200-202ENST00000429650 ZNF75DP51815 510 aa15.64■□□□□ 0.09
SNRNP200-202ENST00000429650 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.64■□□□□ 0.09
SNRNP200-202ENST00000429650 PDIA3P30101 505 aaKnown RBP15.63■□□□□ 0.09
SNRNP200-202ENST00000429650 ZNF274Q96GC6 653 aaPredicted RBP15.63■□□□□ 0.09
SNRNP200-202ENST00000429650 TRIM5Q9C035 493 aa15.63■□□□□ 0.09
SNRNP200-202ENST00000429650 WDR17Q8IZU2 1322 aa15.63■□□□□ 0.09
SNRNP200-202ENST00000429650 CHST3Q7LGC8 479 aa15.63■□□□□ 0.09
SNRNP200-202ENST00000429650 USP28Q96RU2 1077 aa15.63■□□□□ 0.09
SNRNP200-202ENST00000429650 CAVIN2O95810 425 aa15.62■□□□□ 0.09
SNRNP200-202ENST00000429650 TTLL5Q6EMB2 1281 aa15.62■□□□□ 0.09
SNRNP200-202ENST00000429650 CCDC186Q7Z3E2 898 aa15.62■□□□□ 0.09
SNRNP200-202ENST00000429650 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.62■□□□□ 0.09
SNRNP200-202ENST00000429650 CCAR1Q8IX12 1150 aaKnown RBP15.62■□□□□ 0.09
SNRNP200-202ENST00000429650 OSBP2Q969R2 916 aa15.62■□□□□ 0.09
SNRNP200-202ENST00000429650 ATL3Q6DD88 541 aa15.62■□□□□ 0.09
SNRNP200-202ENST00000429650 TOM1L2Q6ZVM7 507 aa15.62■□□□□ 0.09
SNRNP200-202ENST00000429650 GOLPH3LQ9H4A5 285 aa15.62■□□□□ 0.09
SNRNP200-202ENST00000429650 CEP126Q9P2H0 1117 aa15.62■□□□□ 0.09
SNRNP200-202ENST00000429650 NKX1-1Q15270 411 aaPredicted RBP15.61■□□□□ 0.09
SNRNP200-202ENST00000429650 DRC7Q8IY82 874 aa15.61■□□□□ 0.09
SNRNP200-202ENST00000429650 ISCA1Q9BUE6 129 aa15.61■□□□□ 0.09
SNRNP200-202ENST00000429650 NWD2Q9ULI1 1742 aa15.61■□□□□ 0.09
SNRNP200-202ENST00000429650 CTAGE5O15320 804 aa15.61■□□□□ 0.09
SNRNP200-202ENST00000429650 PPFIA3O75145 1194 aa15.61■□□□□ 0.09
SNRNP200-202ENST00000429650 FKBP4Q02790 459 aaKnown RBP eCLIP15.61■□□□□ 0.09
SNRNP200-202ENST00000429650 TNS2Q63HR2 1409 aa15.61■□□□□ 0.09
SNRNP200-202ENST00000429650 FBXL16Q8N461 479 aa15.61■□□□□ 0.09
SNRNP200-202ENST00000429650 CARMIL3Q8ND23 1372 aa15.61■□□□□ 0.09
SNRNP200-202ENST00000429650 ZNF396Q96N95 335 aaPredicted RBP15.61■□□□□ 0.09
SNRNP200-202ENST00000429650 NRBP1Q9UHY1 535 aa15.61■□□□□ 0.09
SNRNP200-202ENST00000429650 GUCY1B3Q02153 619 aa15.6■□□□□ 0.09
SNRNP200-202ENST00000429650 SNW1Q13573 536 aaKnown RBP15.6■□□□□ 0.09
SNRNP200-202ENST00000429650 ILDR1Q86SU0 546 aaPredicted RBP15.6■□□□□ 0.09
SNRNP200-202ENST00000429650 TSC1Q92574 1164 aa15.6■□□□□ 0.09
SNRNP200-202ENST00000429650 PRDM11Q9NQV5 511 aa15.6■□□□□ 0.09
SNRNP200-202ENST00000429650 FOXP2O15409 715 aa15.6■□□□□ 0.09
SNRNP200-202ENST00000429650 ADORA1P30542 326 aa15.6■□□□□ 0.09
SNRNP200-202ENST00000429650 EVCP57679 992 aa15.6■□□□□ 0.09
SNRNP200-202ENST00000429650 IQCB1Q15051 598 aa15.6■□□□□ 0.09
SNRNP200-202ENST00000429650 CCDC57Q2TAC2 916 aa15.6■□□□□ 0.09
SNRNP200-202ENST00000429650 SHANK3Q9BYB0 1731 aa15.59■□□□□ 0.09
SNRNP200-202ENST00000429650 IGSF3O75054 1194 aa15.59■□□□□ 0.09
SNRNP200-202ENST00000429650 FDPSP14324 419 aaKnown RBP15.59■□□□□ 0.09
SNRNP200-202ENST00000429650 LRMPQ12912 555 aa15.59■□□□□ 0.09
SNRNP200-202ENST00000429650 CCDC158Q5M9N0 1113 aa15.59■□□□□ 0.09
SNRNP200-202ENST00000429650 TTC39AQ5SRH9 613 aa15.59■□□□□ 0.09
SNRNP200-202ENST00000429650 CCDC73Q6ZRK6 1079 aa15.59■□□□□ 0.09
SNRNP200-202ENST00000429650 C11orf57Q6ZUT1 292 aaPredicted RBP15.59■□□□□ 0.09
SNRNP200-202ENST00000429650 CHMP4CQ96CF2 233 aa15.59■□□□□ 0.09
SNRNP200-202ENST00000429650 XAGE2Q96GT9 111 aa15.59■□□□□ 0.09
SNRNP200-202ENST00000429650 TCIRG1Q13488 830 aa15.59■□□□□ 0.09
SNRNP200-202ENST00000429650 STX1AQ16623 288 aa15.59■□□□□ 0.09
SNRNP200-202ENST00000429650 ENGASEQ8NFI3 743 aa15.59■□□□□ 0.09
SNRNP200-202ENST00000429650 COL5A2P05997 1499 aaPredicted RBP15.59■□□□□ 0.09
SNRNP200-202ENST00000429650 LRRFIP1Q32MZ4 808 aaKnown RBP15.58■□□□□ 0.08
SNRNP200-202ENST00000429650 ZSCAN25Q6NSZ9 544 aa15.58■□□□□ 0.08
SNRNP200-202ENST00000429650 ZNF710Q8N1W2 664 aa15.58■□□□□ 0.08
SNRNP200-202ENST00000429650 GPHNQ9NQX3 736 aaPredicted RBP15.58■□□□□ 0.08
SNRNP200-202ENST00000429650 CTNNA3Q9UI47 895 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms