RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 API5Q9BZZ5 524 aaKnown RBP9.4□□□□□ -0.9
LINC01049-201ENST00000426840 RCAN3Q9UKA8 241 aa9.4□□□□□ -0.9
LINC01049-201ENST00000426840 TNNQ9UQP3 1299 aa9.4□□□□□ -0.9
LINC01049-201ENST00000426840 ABCC12Q96J65 1359 aa9.39□□□□□ -0.91
LINC01049-201ENST00000426840 KIF16BQ96L93 1317 aa9.39□□□□□ -0.91
LINC01049-201ENST00000426840 ANKRD31Q8N7Z5 1873 aa9.39□□□□□ -0.91
LINC01049-201ENST00000426840 NPHP1O15259 732 aa9.39□□□□□ -0.91
LINC01049-201ENST00000426840 GPR37O15354 613 aa9.39□□□□□ -0.91
LINC01049-201ENST00000426840 ALDH1L1O75891 902 aa9.39□□□□□ -0.91
LINC01049-201ENST00000426840 SRGNP10124 158 aa9.39□□□□□ -0.91
LINC01049-201ENST00000426840 HCLS1P14317 486 aaPredicted RBP9.39□□□□□ -0.91
LINC01049-201ENST00000426840 PDE6BP35913 854 aa9.39□□□□□ -0.91
LINC01049-201ENST00000426840 BCAMP50895 628 aa9.39□□□□□ -0.91
LINC01049-201ENST00000426840 CASP7P55210 303 aa9.39□□□□□ -0.91
LINC01049-201ENST00000426840 HIC1Q14526 733 aa9.39□□□□□ -0.91
LINC01049-201ENST00000426840 RTL5Q5HYW3 569 aaPredicted RBP9.39□□□□□ -0.91
LINC01049-201ENST00000426840 C2CD5Q86YS7 1000 aa9.39□□□□□ -0.91
LINC01049-201ENST00000426840 FRAT1Q92837 279 aaPredicted RBP9.39□□□□□ -0.91
LINC01049-201ENST00000426840 SRCIN1Q9C0H9 1055 aa9.39□□□□□ -0.91
LINC01049-201ENST00000426840 H0YIN7 160 aa9.38□□□□□ -0.91
LINC01049-201ENST00000426840 IRS4O14654 1257 aaPredicted RBP9.38□□□□□ -0.91
LINC01049-201ENST00000426840 TRIM27P14373 513 aa9.38□□□□□ -0.91
LINC01049-201ENST00000426840 CRY2Q49AN0 593 aa9.38□□□□□ -0.91
LINC01049-201ENST00000426840 ZKSCAN2Q63HK3 967 aa9.38□□□□□ -0.91
LINC01049-201ENST00000426840 INTS3Q68E01 1043 aaKnown RBP9.38□□□□□ -0.91
LINC01049-201ENST00000426840 ATF7IPQ6VMQ6 1270 aa9.38□□□□□ -0.91
LINC01049-201ENST00000426840 THSD4Q6ZMP0 1018 aa9.38□□□□□ -0.91
LINC01049-201ENST00000426840 NLRP3Q96P20 1036 aa9.38□□□□□ -0.91
LINC01049-201ENST00000426840 PDZRN3Q9UPQ7 1066 aa9.38□□□□□ -0.91
LINC01049-201ENST00000426840 KIAA1551Q9HCM1 1747 aa9.38□□□□□ -0.91
LINC01049-201ENST00000426840 PXDNLA1KZ92 1463 aa9.38□□□□□ -0.91
LINC01049-201ENST00000426840 RIC1Q4ADV7 1423 aa9.38□□□□□ -0.91
LINC01049-201ENST00000426840 ABCC4O15439 1325 aa9.37□□□□□ -0.91
LINC01049-201ENST00000426840 CDHR2Q9BYE9 1310 aa9.37□□□□□ -0.91
LINC01049-201ENST00000426840 SF3B3Q15393 1217 aaKnown RBP9.37□□□□□ -0.91
LINC01049-201ENST00000426840 STYK1Q6J9G0 422 aa9.37□□□□□ -0.91
LINC01049-201ENST00000426840 MASTLQ96GX5 879 aa9.37□□□□□ -0.91
LINC01049-201ENST00000426840 USP44Q9H0E7 712 aa9.37□□□□□ -0.91
LINC01049-201ENST00000426840 PIM2Q9P1W9 311 aa9.37□□□□□ -0.91
LINC01049-201ENST00000426840 N4BP2Q86UW6 1770 aaPredicted RBP9.37□□□□□ -0.91
LINC01049-201ENST00000426840 UTYO14607 1347 aa9.36□□□□□ -0.91
LINC01049-201ENST00000426840 GRM8O00222 908 aa9.36□□□□□ -0.91
LINC01049-201ENST00000426840 PDE8AO60658 829 aa9.36□□□□□ -0.91
LINC01049-201ENST00000426840 RNF40O75150 1001 aa9.36□□□□□ -0.91
LINC01049-201ENST00000426840 NPR1P16066 1061 aa9.36□□□□□ -0.91
LINC01049-201ENST00000426840 HOXA10P31260 410 aaPredicted RBP9.36□□□□□ -0.91
LINC01049-201ENST00000426840 CCT4P50991 539 aaKnown RBP9.36□□□□□ -0.91
LINC01049-201ENST00000426840 UBE3BQ7Z3V4 1068 aa9.36□□□□□ -0.91
LINC01049-201ENST00000426840 ZNF622Q969S3 477 aaKnown RBP eCLIP9.36□□□□□ -0.91
LINC01049-201ENST00000426840 CLUAP1Q96AJ1 413 aa9.36□□□□□ -0.91
LINC01049-201ENST00000426840 KAZALD1Q96I82 304 aa9.36□□□□□ -0.91
LINC01049-201ENST00000426840 PLA2G12BQ9BX93 195 aa9.36□□□□□ -0.91
LINC01049-201ENST00000426840 ADGRG1Q9Y653 693 aa9.36□□□□□ -0.91
LINC01049-201ENST00000426840 PLIN1O60240 522 aa9.35□□□□□ -0.91
LINC01049-201ENST00000426840 CSF1RP07333 972 aa9.35□□□□□ -0.91
LINC01049-201ENST00000426840 NBPF7P0C2Y1 421 aaPredicted RBP9.35□□□□□ -0.91
LINC01049-201ENST00000426840 RLBP1P12271 317 aa9.35□□□□□ -0.91
LINC01049-201ENST00000426840 YBX3P16989 372 aaKnown RBP eCLIP9.35□□□□□ -0.91
LINC01049-201ENST00000426840 FOXO4P98177 505 aa9.35□□□□□ -0.91
LINC01049-201ENST00000426840 EPHA10Q5JZY3 1008 aa9.35□□□□□ -0.91
LINC01049-201ENST00000426840 SAMD7Q7Z3H4 446 aa9.35□□□□□ -0.91
LINC01049-201ENST00000426840 DZIP1LQ8IYY4 767 aaKnown RBP9.35□□□□□ -0.91
LINC01049-201ENST00000426840 TMEM57Q8N5G2 664 aa9.35□□□□□ -0.91
LINC01049-201ENST00000426840 TTLL6Q8N841 843 aa9.35□□□□□ -0.91
LINC01049-201ENST00000426840 TTLL11Q8NHH1 800 aa9.35□□□□□ -0.91
LINC01049-201ENST00000426840 C7orf43Q8WVR3 580 aa9.35□□□□□ -0.91
LINC01049-201ENST00000426840 LRCH3Q96II8 777 aa9.35□□□□□ -0.91
LINC01049-201ENST00000426840 CRAMP1Q96RY5 1269 aa9.35□□□□□ -0.91
LINC01049-201ENST00000426840 C9orf78Q9NZ63 289 aaPredicted RBP9.35□□□□□ -0.91
LINC01049-201ENST00000426840 HCSTQ9UBK5 93 aa9.35□□□□□ -0.91
LINC01049-201ENST00000426840 WWC3Q9ULE0 1092 aa9.35□□□□□ -0.91
LINC01049-201ENST00000426840 DDX60Q8IY21 1712 aaKnown RBP9.34□□□□□ -0.91
LINC01049-201ENST00000426840 SOWAHBA6NEL2 793 aa9.34□□□□□ -0.91
LINC01049-201ENST00000426840 HSP90B1P14625 803 aaKnown RBP9.34□□□□□ -0.91
LINC01049-201ENST00000426840 ALDH1B1P30837 517 aa9.34□□□□□ -0.91
LINC01049-201ENST00000426840 DALRD3Q5D0E6 543 aaKnown RBP9.34□□□□□ -0.91
LINC01049-201ENST00000426840 CNKSR1Q969H4 720 aa9.34□□□□□ -0.91
LINC01049-201ENST00000426840 RBM17Q96I25 401 aaKnown RBP9.34□□□□□ -0.91
LINC01049-201ENST00000426840 SUCLG2Q96I99 432 aa9.34□□□□□ -0.91
LINC01049-201ENST00000426840 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.34□□□□□ -0.91
LINC01049-201ENST00000426840 BCS1LQ9Y276 419 aa9.34□□□□□ -0.91
LINC01049-201ENST00000426840 TNRC6CQ9HCJ0 1690 aaKnown RBP9.34□□□□□ -0.91
LINC01049-201ENST00000426840 LAMB2P55268 1798 aa9.33□□□□□ -0.92
LINC01049-201ENST00000426840 CTSWP56202 376 aa9.33□□□□□ -0.92
LINC01049-201ENST00000426840 GPR162Q16538 588 aa9.33□□□□□ -0.92
LINC01049-201ENST00000426840 RBM46Q8TBY0 533 aaKnown RBP9.33□□□□□ -0.92
LINC01049-201ENST00000426840 PANK1Q8TE04 598 aa9.33□□□□□ -0.92
LINC01049-201ENST00000426840 RPGRQ92834 1020 aaKnown RBP9.33□□□□□ -0.92
LINC01049-201ENST00000426840 SEC31BQ9NQW1 1179 aa9.33□□□□□ -0.92
LINC01049-201ENST00000426840 BRCA1P38398 1863 aaKnown RBP9.33□□□□□ -0.92
LINC01049-201ENST00000426840 COL11A2P13942 1736 aaPredicted RBP9.33□□□□□ -0.92
LINC01049-201ENST00000426840 SLX4Q8IY92 1834 aa9.33□□□□□ -0.92
LINC01049-201ENST00000426840 SRCAPQ6ZRS2 3230 aa9.33□□□□□ -0.92
LINC01049-201ENST00000426840 DLEC1Q9Y238 1755 aa9.32□□□□□ -0.92
LINC01049-201ENST00000426840 ZBTB7BO15156 539 aaPredicted RBP9.32□□□□□ -0.92
LINC01049-201ENST00000426840 BBOX1O75936 387 aa9.32□□□□□ -0.92
LINC01049-201ENST00000426840 MS4A1P11836 297 aa9.32□□□□□ -0.92
LINC01049-201ENST00000426840 PDE3AQ14432 1141 aa9.32□□□□□ -0.92
LINC01049-201ENST00000426840 CCDC152Q4G0S7 254 aa9.32□□□□□ -0.92
LINC01049-201ENST00000426840 C20orf194Q5TEA3 1177 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms