RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 TTF1Q15361 905 aaPredicted RBP17.32■□□□□ 0.36
CDK3-201ENST00000425876 ZNF589Q86UQ0 364 aaPredicted RBP17.32■□□□□ 0.36
CDK3-201ENST00000425876 HELBQ8NG08 1087 aaPredicted RBP17.32■□□□□ 0.36
CDK3-201ENST00000425876 CHMP5Q9NZZ3 219 aa17.32■□□□□ 0.36
CDK3-201ENST00000425876 CIZ1Q9ULV3 898 aaPredicted RBP17.32■□□□□ 0.36
CDK3-201ENST00000425876 ZKSCAN1P17029 563 aaPredicted RBP17.32■□□□□ 0.36
CDK3-201ENST00000425876 MCAMP43121 646 aa17.32■□□□□ 0.36
CDK3-201ENST00000425876 ZAP70P43403 619 aa17.32■□□□□ 0.36
CDK3-201ENST00000425876 RNF20Q5VTR2 975 aa17.32■□□□□ 0.36
CDK3-201ENST00000425876 RASEFQ8IZ41 740 aa17.32■□□□□ 0.36
CDK3-201ENST00000425876 HMG20BQ9P0W2 317 aa17.32■□□□□ 0.36
CDK3-201ENST00000425876 AKAP11Q9UKA4 1901 aa17.31■□□□□ 0.36
CDK3-201ENST00000425876 TM4SF1P30408 202 aa17.31■□□□□ 0.36
CDK3-201ENST00000425876 PHKA1P46020 1223 aa17.31■□□□□ 0.36
CDK3-201ENST00000425876 RPS8P62241 208 aaKnown RBP17.31■□□□□ 0.36
CDK3-201ENST00000425876 UBE4AQ14139 1066 aa17.31■□□□□ 0.36
CDK3-201ENST00000425876 TSGA10IPQ3SY00 556 aa17.31■□□□□ 0.36
CDK3-201ENST00000425876 CREB3L3Q68CJ9 461 aa17.31■□□□□ 0.36
CDK3-201ENST00000425876 CNBD1Q8NA66 436 aa17.31■□□□□ 0.36
CDK3-201ENST00000425876 CASZ1Q86V15 1759 aa17.31■□□□□ 0.36
CDK3-201ENST00000425876 KCNJ4P48050 445 aa17.3■□□□□ 0.36
CDK3-201ENST00000425876 ZSCAN25Q6NSZ9 544 aa17.3■□□□□ 0.36
CDK3-201ENST00000425876 PRPF40BQ6NWY9 871 aaKnown RBP17.3■□□□□ 0.36
CDK3-201ENST00000425876 ANO8Q9HCE9 1232 aaPredicted RBP17.3■□□□□ 0.36
CDK3-201ENST00000425876 U3KPZ7 1027 aaPredicted RBP17.3■□□□□ 0.36
CDK3-201ENST00000425876 PSDA5PKW4 1024 aaPredicted RBP17.29■□□□□ 0.36
CDK3-201ENST00000425876 HSP90AA1P07900 732 aaKnown RBP17.29■□□□□ 0.36
CDK3-201ENST00000425876 CELF1Q92879 486 aaKnown RBP17.29■□□□□ 0.36
CDK3-201ENST00000425876 AKT1S1Q96B36 256 aa17.29■□□□□ 0.36
CDK3-201ENST00000425876 DSCC1Q9BVC3 393 aa17.29■□□□□ 0.36
CDK3-201ENST00000425876 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.29■□□□□ 0.36
CDK3-201ENST00000425876 MINPP1Q9UNW1 487 aa17.29■□□□□ 0.36
CDK3-201ENST00000425876 COL4A1P02462 1669 aa17.28■□□□□ 0.36
CDK3-201ENST00000425876 SLC27A2O14975 620 aa17.28■□□□□ 0.36
CDK3-201ENST00000425876 NPHP1O15259 732 aa17.28■□□□□ 0.36
CDK3-201ENST00000425876 SPRYD3Q8NCJ5 442 aa17.28■□□□□ 0.36
CDK3-201ENST00000425876 FLAD1Q8NFF5 587 aa17.28■□□□□ 0.36
CDK3-201ENST00000425876 SEC62Q99442 399 aaKnown RBP17.28■□□□□ 0.36
CDK3-201ENST00000425876 CYP2E1P05181 493 aaPredicted RBP17.28■□□□□ 0.36
CDK3-201ENST00000425876 R3HDM1Q15032 1099 aaKnown RBP17.28■□□□□ 0.36
CDK3-201ENST00000425876 PRR5LQ6MZQ0 368 aa17.28■□□□□ 0.36
CDK3-201ENST00000425876 APPBP2Q92624 585 aa17.28■□□□□ 0.36
CDK3-201ENST00000425876 TTC14Q96N46 770 aa17.28■□□□□ 0.36
CDK3-201ENST00000425876 UPF3BQ9BZI7 483 aaKnown RBP17.28■□□□□ 0.36
CDK3-201ENST00000425876 ANKRD2Q9GZV1 360 aa17.28■□□□□ 0.36
CDK3-201ENST00000425876 ZSWIM6Q9HCJ5 1215 aa17.28■□□□□ 0.36
CDK3-201ENST00000425876 ZNF804BA4D1E1 1349 aa17.27■□□□□ 0.36
CDK3-201ENST00000425876 MAST3O60307 1309 aa17.27■□□□□ 0.36
CDK3-201ENST00000425876 CHGBP05060 677 aa17.27■□□□□ 0.35
CDK3-201ENST00000425876 SERPINB2P05120 415 aa17.27■□□□□ 0.35
CDK3-201ENST00000425876 PSMA5P28066 241 aa17.27■□□□□ 0.35
CDK3-201ENST00000425876 PI16Q6UXB8 463 aa17.27■□□□□ 0.35
CDK3-201ENST00000425876 SPATA5Q8NB90 893 aa17.27■□□□□ 0.35
CDK3-201ENST00000425876 RPAP1Q9BWH6 1393 aaPredicted RBP17.26■□□□□ 0.35
CDK3-201ENST00000425876 A0A1B0GUL6 1792 aa17.26■□□□□ 0.35
CDK3-201ENST00000425876 ZBTB22O15209 634 aa17.26■□□□□ 0.35
CDK3-201ENST00000425876 ST5P78524 1137 aa17.26■□□□□ 0.35
CDK3-201ENST00000425876 KRT32Q14532 448 aa17.26■□□□□ 0.35
CDK3-201ENST00000425876 UBE3CQ15386 1083 aa17.26■□□□□ 0.35
CDK3-201ENST00000425876 CCDC129Q6ZRS4 1044 aa17.26■□□□□ 0.35
CDK3-201ENST00000425876 OSBP2Q969R2 916 aa17.26■□□□□ 0.35
CDK3-201ENST00000425876 CWC22Q9HCG8 908 aaKnown RBP17.26■□□□□ 0.35
CDK3-201ENST00000425876 TFCP2L1Q9NZI6 479 aa17.26■□□□□ 0.35
CDK3-201ENST00000425876 SNAP23O00161 211 aa17.25■□□□□ 0.35
CDK3-201ENST00000425876 ADD2P35612 726 aa17.25■□□□□ 0.35
CDK3-201ENST00000425876 CUL4AQ13619 759 aa17.25■□□□□ 0.35
CDK3-201ENST00000425876 RASGRF1Q13972 1273 aa17.25■□□□□ 0.35
CDK3-201ENST00000425876 NFKBIBQ15653 356 aa17.25■□□□□ 0.35
CDK3-201ENST00000425876 ZNF827Q17R98 1081 aa17.25■□□□□ 0.35
CDK3-201ENST00000425876 CRY2Q49AN0 593 aa17.25■□□□□ 0.35
CDK3-201ENST00000425876 VPS53Q5VIR6 699 aa17.25■□□□□ 0.35
CDK3-201ENST00000425876 TMX3Q96JJ7 454 aa17.25■□□□□ 0.35
CDK3-201ENST00000425876 JAKMIP1Q96N16 626 aaKnown RBP17.25■□□□□ 0.35
CDK3-201ENST00000425876 CYP46A1Q9Y6A2 500 aa17.25■□□□□ 0.35
CDK3-201ENST00000425876 TNRC6CQ9HCJ0 1690 aaKnown RBP17.25■□□□□ 0.35
CDK3-201ENST00000425876 MYH7P12883 1935 aa17.24■□□□□ 0.35
CDK3-201ENST00000425876 CASTP20810 708 aaKnown RBP17.24■□□□□ 0.35
CDK3-201ENST00000425876 BCAMP50895 628 aa17.24■□□□□ 0.35
CDK3-201ENST00000425876 GRAPQ13588 217 aa17.24■□□□□ 0.35
CDK3-201ENST00000425876 RUFY3Q7L099 469 aa17.24■□□□□ 0.35
CDK3-201ENST00000425876 NLGN1Q8N2Q7 840 aa17.24■□□□□ 0.35
CDK3-201ENST00000425876 CCDC24Q8N4L8 307 aa17.24■□□□□ 0.35
CDK3-201ENST00000425876 GRAPLQ8TC17 118 aaPredicted RBP17.24■□□□□ 0.35
CDK3-201ENST00000425876 INTS4Q96HW7 963 aaKnown RBP17.24■□□□□ 0.35
CDK3-201ENST00000425876 PIH1D3Q9NQM4 214 aaKnown RBP17.24■□□□□ 0.35
CDK3-201ENST00000425876 GNL3LQ9NVN8 582 aaKnown RBP17.24■□□□□ 0.35
CDK3-201ENST00000425876 TAF1P21675 1872 aa17.24■□□□□ 0.35
CDK3-201ENST00000425876 POLRMTO00411 1230 aaKnown RBP17.23■□□□□ 0.35
CDK3-201ENST00000425876 HSPD1P10809 573 aaKnown RBP17.23■□□□□ 0.35
CDK3-201ENST00000425876 ADCK5Q3MIX3 580 aa17.23■□□□□ 0.35
CDK3-201ENST00000425876 ALDH8A1Q9H2A2 487 aaPredicted RBP17.23■□□□□ 0.35
CDK3-201ENST00000425876 KLRG2A4D1S0 409 aaPredicted RBP17.23■□□□□ 0.35
CDK3-201ENST00000425876 M0R2C6 588 aa17.23■□□□□ 0.35
CDK3-201ENST00000425876 DDR1Q08345 913 aa17.23■□□□□ 0.35
CDK3-201ENST00000425876 WASHC4Q2M389 1173 aa17.23■□□□□ 0.35
CDK3-201ENST00000425876 SLFNL1Q499Z3 407 aa17.23■□□□□ 0.35
CDK3-201ENST00000425876 CAVIN4Q5BKX8 364 aa17.23■□□□□ 0.35
CDK3-201ENST00000425876 SLC9C2Q5TAH2 1124 aa17.23■□□□□ 0.35
CDK3-201ENST00000425876 SEMA3EO15041 775 aa17.22■□□□□ 0.35
CDK3-201ENST00000425876 MAP3K12Q12852 859 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms