RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 PGBD1Q96JS3 809 aa15.28■□□□□ 0.04
COL12A1-205ENST00000425443 NRBP1Q9UHY1 535 aa15.28■□□□□ 0.04
COL12A1-205ENST00000425443 EYA2O00167 538 aa15.28■□□□□ 0.04
COL12A1-205ENST00000425443 PTGS1P23219 599 aa15.28■□□□□ 0.04
COL12A1-205ENST00000425443 FKBP4Q02790 459 aaKnown RBP eCLIP15.28■□□□□ 0.04
COL12A1-205ENST00000425443 KIF6Q6ZMV9 814 aa15.28■□□□□ 0.04
COL12A1-205ENST00000425443 SPATA32Q96LK8 384 aa15.28■□□□□ 0.04
COL12A1-205ENST00000425443 PLEKHG2Q9H7P9 1386 aa15.28■□□□□ 0.04
COL12A1-205ENST00000425443 A0A0G2JS52 829 aa15.28■□□□□ 0.04
COL12A1-205ENST00000425443 H3BQV1 296 aa15.28■□□□□ 0.04
COL12A1-205ENST00000425443 IFFO2Q5TF58 517 aa15.28■□□□□ 0.04
COL12A1-205ENST00000425443 Q6ZUG5 572 aa15.28■□□□□ 0.04
COL12A1-205ENST00000425443 BRF1Q92994 677 aa15.28■□□□□ 0.04
COL12A1-205ENST00000425443 DNAJC5Q9H3Z4 198 aa15.28■□□□□ 0.04
COL12A1-205ENST00000425443 A0A1B0GUL7 405 aa15.27■□□□□ 0.04
COL12A1-205ENST00000425443 NR1I2O75469 434 aa15.27■□□□□ 0.04
COL12A1-205ENST00000425443 CCDC192P0DO97 292 aa15.27■□□□□ 0.04
COL12A1-205ENST00000425443 GUCY1B3Q02153 619 aa15.27■□□□□ 0.04
COL12A1-205ENST00000425443 LRMPQ12912 555 aa15.27■□□□□ 0.04
COL12A1-205ENST00000425443 NUP62CLQ9H1M0 184 aa15.27■□□□□ 0.04
COL12A1-205ENST00000425443 JCADQ9P266 1359 aa15.27■□□□□ 0.03
COL12A1-205ENST00000425443 ZSCAN20P17040 1043 aaPredicted RBP15.27■□□□□ 0.03
COL12A1-205ENST00000425443 CCT2P78371 535 aaKnown RBP15.27■□□□□ 0.03
COL12A1-205ENST00000425443 ANO6Q4KMQ2 910 aa15.27■□□□□ 0.03
COL12A1-205ENST00000425443 ATG9AQ7Z3C6 839 aa15.27■□□□□ 0.03
COL12A1-205ENST00000425443 DRC7Q8IY82 874 aa15.27■□□□□ 0.03
COL12A1-205ENST00000425443 CBX8Q9HC52 389 aa15.27■□□□□ 0.03
COL12A1-205ENST00000425443 A0A0G2JLW4 131 aa15.26■□□□□ 0.03
COL12A1-205ENST00000425443 MAP3K11Q16584 847 aa15.26■□□□□ 0.03
COL12A1-205ENST00000425443 LEO1Q8WVC0 666 aaPredicted RBP15.26■□□□□ 0.03
COL12A1-205ENST00000425443 ARFGEF2Q9Y6D5 1785 aa15.26■□□□□ 0.03
COL12A1-205ENST00000425443 ZNF609O15014 1411 aa15.26■□□□□ 0.03
COL12A1-205ENST00000425443 CYP21A2P08686 494 aa15.26■□□□□ 0.03
COL12A1-205ENST00000425443 CCDC158Q5M9N0 1113 aa15.26■□□□□ 0.03
COL12A1-205ENST00000425443 SYTL4Q96C24 671 aaPredicted RBP15.26■□□□□ 0.03
COL12A1-205ENST00000425443 PUS3Q9BZE2 481 aaKnown RBP15.26■□□□□ 0.03
COL12A1-205ENST00000425443 ZNF335Q9H4Z2 1342 aaPredicted RBP15.26■□□□□ 0.03
COL12A1-205ENST00000425443 GTF2F1P35269 517 aaKnown RBP eCLIP15.26■□□□□ 0.03
COL12A1-205ENST00000425443 TTC39AQ5SRH9 613 aa15.26■□□□□ 0.03
COL12A1-205ENST00000425443 FAM200AQ8TCP9 573 aa15.26■□□□□ 0.03
COL12A1-205ENST00000425443 FAM89AQ96GI7 184 aa15.26■□□□□ 0.03
COL12A1-205ENST00000425443 MAP7D2Q96T17 732 aa15.26■□□□□ 0.03
COL12A1-205ENST00000425443 FTOQ9C0B1 505 aaKnown RBP eCLIP15.26■□□□□ 0.03
COL12A1-205ENST00000425443 TNMDQ9H2S6 317 aa15.26■□□□□ 0.03
COL12A1-205ENST00000425443 ABCC6O95255 1503 aa15.25■□□□□ 0.03
COL12A1-205ENST00000425443 ELP1O95163 1332 aa15.25■□□□□ 0.03
COL12A1-205ENST00000425443 A0A087WWV3 80 aa15.25■□□□□ 0.03
COL12A1-205ENST00000425443 HMGN5P82970 282 aaKnown RBP15.25■□□□□ 0.03
COL12A1-205ENST00000425443 PRIMPOLQ96LW4 560 aa15.25■□□□□ 0.03
COL12A1-205ENST00000425443 PKD1L3Q7Z443 1732 aa15.25■□□□□ 0.03
COL12A1-205ENST00000425443 SOS2Q07890 1332 aaPredicted RBP15.25■□□□□ 0.03
COL12A1-205ENST00000425443 STARD3NLO95772 234 aa15.25■□□□□ 0.03
COL12A1-205ENST00000425443 CBX1P83916 185 aa15.25■□□□□ 0.03
COL12A1-205ENST00000425443 WASHC4Q2M389 1173 aa15.25■□□□□ 0.03
COL12A1-205ENST00000425443 TSGA10IPQ3SY00 556 aa15.25■□□□□ 0.03
COL12A1-205ENST00000425443 HSP90AB3PQ58FF7 597 aa15.25■□□□□ 0.03
COL12A1-205ENST00000425443 USPL1Q5W0Q7 1092 aa15.25■□□□□ 0.03
COL12A1-205ENST00000425443 DNAJC10Q8IXB1 793 aa15.25■□□□□ 0.03
COL12A1-205ENST00000425443 ASAP1Q9ULH1 1129 aa15.25■□□□□ 0.03
COL12A1-205ENST00000425443 TCIRG1Q13488 830 aa15.24■□□□□ 0.03
COL12A1-205ENST00000425443 NKX1-1Q15270 411 aaPredicted RBP15.24■□□□□ 0.03
COL12A1-205ENST00000425443 RAB11FIP4Q86YS3 637 aa15.24■□□□□ 0.03
COL12A1-205ENST00000425443 BCL2L12Q9HB09 334 aa15.24■□□□□ 0.03
COL12A1-205ENST00000425443 COL5A2P05997 1499 aaPredicted RBP15.24■□□□□ 0.03
COL12A1-205ENST00000425443 STOX1Q6ZVD7 989 aa15.24■□□□□ 0.03
COL12A1-205ENST00000425443 NCOA5Q9HCD5 579 aaKnown RBP15.24■□□□□ 0.03
COL12A1-205ENST00000425443 RIOK3O14730 519 aaKnown RBP15.23■□□□□ 0.03
COL12A1-205ENST00000425443 GPTP24298 496 aa15.23■□□□□ 0.03
COL12A1-205ENST00000425443 IFIT5Q13325 482 aaKnown RBP15.23■□□□□ 0.03
COL12A1-205ENST00000425443 GPR108Q9NPR9 543 aa15.23■□□□□ 0.03
COL12A1-205ENST00000425443 HELLSQ9NRZ9 838 aa15.23■□□□□ 0.03
COL12A1-205ENST00000425443 LRRFIP1Q32MZ4 808 aaKnown RBP15.23■□□□□ 0.03
COL12A1-205ENST00000425443 TEX13AQ9BXU3 409 aaPredicted RBP15.23■□□□□ 0.03
COL12A1-205ENST00000425443 DNAJC25Q9H1X3 360 aa15.23■□□□□ 0.03
COL12A1-205ENST00000425443 HMGB1P09429 215 aaKnown RBP15.23■□□□□ 0.03
COL12A1-205ENST00000425443 APOBRQ0VD83 1088 aa15.23■□□□□ 0.03
COL12A1-205ENST00000425443 RESTQ13127 1097 aa15.23■□□□□ 0.03
COL12A1-205ENST00000425443 CCDC186Q7Z3E2 898 aa15.23■□□□□ 0.03
COL12A1-205ENST00000425443 ERCC4Q92889 916 aaPredicted RBP15.23■□□□□ 0.03
COL12A1-205ENST00000425443 GTF3C6Q969F1 213 aa15.23■□□□□ 0.03
COL12A1-205ENST00000425443 BTG4Q9NY30 223 aa15.23■□□□□ 0.03
COL12A1-205ENST00000425443 AKAP2Q9Y2D5 859 aa15.23■□□□□ 0.03
COL12A1-205ENST00000425443 RFX7Q2KHR2 1363 aa15.22■□□□□ 0.03
COL12A1-205ENST00000425443 ALDH8A1Q9H2A2 487 aaPredicted RBP15.22■□□□□ 0.03
COL12A1-205ENST00000425443 SH3TC1Q8TE82 1336 aa15.22■□□□□ 0.03
COL12A1-205ENST00000425443 RNF113AO15541 343 aaKnown RBP15.22■□□□□ 0.03
COL12A1-205ENST00000425443 HAND2P61296 217 aa15.22■□□□□ 0.03
COL12A1-205ENST00000425443 SCRN1Q12765 414 aa15.22■□□□□ 0.03
COL12A1-205ENST00000425443 RBM43Q6ZSC3 357 aaKnown RBP15.22■□□□□ 0.03
COL12A1-205ENST00000425443 SCAND2PQ9GZW5 306 aaPredicted RBP15.22■□□□□ 0.03
COL12A1-205ENST00000425443 CLSTN2Q9H4D0 955 aa15.22■□□□□ 0.03
COL12A1-205ENST00000425443 SPDYE4A6NLX3 237 aa15.21■□□□□ 0.03
COL12A1-205ENST00000425443 ATP2B3Q16720 1220 aa15.21■□□□□ 0.03
COL12A1-205ENST00000425443 PARP4Q9UKK3 1724 aaKnown RBP15.21■□□□□ 0.03
COL12A1-205ENST00000425443 CIAO1O76071 339 aa15.21■□□□□ 0.03
COL12A1-205ENST00000425443 CCDC144BQ3MJ40 725 aa15.21■□□□□ 0.03
COL12A1-205ENST00000425443 DHX32Q7L7V1 743 aaKnown RBP15.21■□□□□ 0.03
COL12A1-205ENST00000425443 CCDC144CPQ8IYA2 1237 aa15.21■□□□□ 0.03
COL12A1-205ENST00000425443 PIGBQ92521 554 aa15.21■□□□□ 0.03
COL12A1-205ENST00000425443 CCDC94Q9BW85 323 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms