RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 TM4SF5O14894 197 aa10.28□□□□□ -0.76
LINC01040-201ENST00000425048 ADAMTSL4Q6UY14 1074 aa10.28□□□□□ -0.76
LINC01040-201ENST00000425048 CCDC97Q96F63 343 aaPredicted RBP10.28□□□□□ -0.76
LINC01040-201ENST00000425048 SEC31BQ9NQW1 1179 aa10.28□□□□□ -0.76
LINC01040-201ENST00000425048 SLAIN2Q9P270 581 aa10.28□□□□□ -0.76
LINC01040-201ENST00000425048 SERPINA10Q9UK55 444 aa10.28□□□□□ -0.76
LINC01040-201ENST00000425048 PCSK2P16519 638 aa10.27□□□□□ -0.77
LINC01040-201ENST00000425048 EPHA1P21709 976 aa10.27□□□□□ -0.77
LINC01040-201ENST00000425048 UVSSAQ2YD98 709 aa10.27□□□□□ -0.77
LINC01040-201ENST00000425048 XKR5Q6UX68 686 aa10.27□□□□□ -0.77
LINC01040-201ENST00000425048 ARMC10Q8N2F6 343 aa10.27□□□□□ -0.77
LINC01040-201ENST00000425048 CNTN3Q9P232 1028 aa10.27□□□□□ -0.77
LINC01040-201ENST00000425048 CABP4P57796 275 aa10.26□□□□□ -0.77
LINC01040-201ENST00000425048 KIAA1211Q6ZU35 1233 aa10.26□□□□□ -0.77
LINC01040-201ENST00000425048 ATCAYQ86WG3 371 aa10.26□□□□□ -0.77
LINC01040-201ENST00000425048 TTC16Q8NEE8 873 aa10.26□□□□□ -0.77
LINC01040-201ENST00000425048 KLHDC7BQ96G42 594 aa10.26□□□□□ -0.77
LINC01040-201ENST00000425048 SALL4Q9UJQ4 1053 aa10.26□□□□□ -0.77
LINC01040-201ENST00000425048 CES1P23141 567 aa10.25□□□□□ -0.77
LINC01040-201ENST00000425048 CD97P48960 835 aa10.25□□□□□ -0.77
LINC01040-201ENST00000425048 WNT8BQ93098 351 aa10.25□□□□□ -0.77
LINC01040-201ENST00000425048 PMEPA1Q969W9 287 aa10.25□□□□□ -0.77
LINC01040-201ENST00000425048 UTP4Q969X6 686 aaKnown RBP10.25□□□□□ -0.77
LINC01040-201ENST00000425048 FAM46AQ96IP4 442 aaKnown RBP10.25□□□□□ -0.77
LINC01040-201ENST00000425048 DDX3YO15523 660 aaKnown RBP10.24□□□□□ -0.77
LINC01040-201ENST00000425048 COBLO75128 1261 aa10.24□□□□□ -0.77
LINC01040-201ENST00000425048 NOM1Q5C9Z4 860 aaKnown RBP10.24□□□□□ -0.77
LINC01040-201ENST00000425048 EDEM1Q92611 657 aa10.24□□□□□ -0.77
LINC01040-201ENST00000425048 KANSL3Q9P2N6 904 aa10.24□□□□□ -0.77
LINC01040-201ENST00000425048 H3BRJ5 948 aa10.23□□□□□ -0.77
LINC01040-201ENST00000425048 PIP4K2BP78356 416 aa10.23□□□□□ -0.77
LINC01040-201ENST00000425048 DNM1Q05193 864 aaKnown RBP10.23□□□□□ -0.77
LINC01040-201ENST00000425048 C1orf127Q8N9H9 656 aa10.23□□□□□ -0.77
LINC01040-201ENST00000425048 HELQQ8TDG4 1101 aa10.23□□□□□ -0.77
LINC01040-201ENST00000425048 OSGEPQ9NPF4 335 aa10.23□□□□□ -0.77
LINC01040-201ENST00000425048 SART1O43290 800 aaKnown RBP10.22□□□□□ -0.77
LINC01040-201ENST00000425048 NFIAQ12857 509 aa10.22□□□□□ -0.77
LINC01040-201ENST00000425048 C8orf34Q49A92 452 aa10.22□□□□□ -0.77
LINC01040-201ENST00000425048 FOXD4L4Q8WXT5 416 aaPredicted RBP10.22□□□□□ -0.77
LINC01040-201ENST00000425048 GGNBP2Q9H3C7 697 aa10.22□□□□□ -0.77
LINC01040-201ENST00000425048 NFKBIEO00221 500 aa10.21□□□□□ -0.77
LINC01040-201ENST00000425048 ADAM11O75078 769 aa10.21□□□□□ -0.77
LINC01040-201ENST00000425048 TGFB1P01137 390 aa10.21□□□□□ -0.77
LINC01040-201ENST00000425048 RNF43Q68DV7 783 aa10.21□□□□□ -0.77
LINC01040-201ENST00000425048 TRIM42Q8IWZ5 723 aa10.21□□□□□ -0.77
LINC01040-201ENST00000425048 UBASH3BQ8TF42 649 aa10.21□□□□□ -0.77
LINC01040-201ENST00000425048 MYRFLQ96LU7 910 aa10.21□□□□□ -0.77
LINC01040-201ENST00000425048 C7orf69Q9H7B7 122 aa10.21□□□□□ -0.77
LINC01040-201ENST00000425048 DZANK1Q9NVP4 752 aa10.21□□□□□ -0.77
LINC01040-201ENST00000425048 PDE2AO00408 941 aaPredicted RBP10.2□□□□□ -0.78
LINC01040-201ENST00000425048 MED26O95402 600 aa10.2□□□□□ -0.78
LINC01040-201ENST00000425048 MZF1P28698 734 aaPredicted RBP10.2□□□□□ -0.78
LINC01040-201ENST00000425048 ARL4DP49703 201 aa10.2□□□□□ -0.78
LINC01040-201ENST00000425048 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.2□□□□□ -0.78
LINC01040-201ENST00000425048 HMX2A2RU54 273 aa10.19□□□□□ -0.78
LINC01040-201ENST00000425048 PDGFAP04085 211 aa10.19□□□□□ -0.78
LINC01040-201ENST00000425048 ANKRD34AQ69YU3 496 aa10.19□□□□□ -0.78
LINC01040-201ENST00000425048 ZDHHC13Q8IUH4 622 aa10.19□□□□□ -0.78
LINC01040-201ENST00000425048 CLEC10AQ8IUN9 316 aa10.19□□□□□ -0.78
LINC01040-201ENST00000425048 ACPPP15309 386 aa10.18□□□□□ -0.78
LINC01040-201ENST00000425048 GRIK1P39086 918 aa10.18□□□□□ -0.78
LINC01040-201ENST00000425048 MCTP1Q6DN14 999 aa10.18□□□□□ -0.78
LINC01040-201ENST00000425048 ALKBH2Q6NS38 261 aa10.18□□□□□ -0.78
LINC01040-201ENST00000425048 INTS5Q6P9B9 1019 aaKnown RBP10.18□□□□□ -0.78
LINC01040-201ENST00000425048 FAM20CQ8IXL6 584 aa10.18□□□□□ -0.78
LINC01040-201ENST00000425048 FAM83CQ9BQN1 747 aa10.18□□□□□ -0.78
LINC01040-201ENST00000425048 RNF208Q9H0X6 261 aa10.18□□□□□ -0.78
LINC01040-201ENST00000425048 KIAA1324LA8MWY0 1029 aaPredicted RBP10.17□□□□□ -0.78
LINC01040-201ENST00000425048 BMP3P12645 472 aa10.17□□□□□ -0.78
LINC01040-201ENST00000425048 EIF1AXP47813 144 aaKnown RBP10.17□□□□□ -0.78
LINC01040-201ENST00000425048 SLC7A3Q8WY07 619 aa10.17□□□□□ -0.78
LINC01040-201ENST00000425048 DBNDD2Q9BQY9 259 aa10.17□□□□□ -0.78
LINC01040-201ENST00000425048 COL17A1Q9UMD9 1497 aaPredicted RBP10.17□□□□□ -0.78
LINC01040-201ENST00000425048 A6NHS1 94 aa10.16□□□□□ -0.78
LINC01040-201ENST00000425048 TRPA1O75762 1119 aa10.16□□□□□ -0.78
LINC01040-201ENST00000425048 NLRP12P59046 1061 aa10.16□□□□□ -0.78
LINC01040-201ENST00000425048 TMEM102Q8N9M5 508 aaPredicted RBP10.16□□□□□ -0.78
LINC01040-201ENST00000425048 GTF3C2Q8WUA4 911 aaPredicted RBP10.16□□□□□ -0.78
LINC01040-201ENST00000425048 RUSC1Q9BVN2 902 aa10.16□□□□□ -0.78
LINC01040-201ENST00000425048 KCNF1Q9H3M0 494 aa10.16□□□□□ -0.78
LINC01040-201ENST00000425048 MPSTP25325 297 aa10.15□□□□□ -0.78
LINC01040-201ENST00000425048 C19orf57Q0VDD7 668 aa10.15□□□□□ -0.78
LINC01040-201ENST00000425048 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.15□□□□□ -0.78
LINC01040-201ENST00000425048 OSMRQ99650 979 aa10.15□□□□□ -0.78
LINC01040-201ENST00000425048 KRTAP4-12Q9BQ66 201 aa10.15□□□□□ -0.78
LINC01040-201ENST00000425048 CHRDQ9H2X0 955 aa10.15□□□□□ -0.78
LINC01040-201ENST00000425048 SOX13Q9UN79 622 aa10.15□□□□□ -0.78
LINC01040-201ENST00000425048 MEGF11A6BM72 1044 aa10.14□□□□□ -0.79
LINC01040-201ENST00000425048 AAMPQ13685 434 aa10.14□□□□□ -0.79
LINC01040-201ENST00000425048 FDX2Q6P4F2 183 aa10.14□□□□□ -0.79
LINC01040-201ENST00000425048 BEND4Q6ZU67 534 aa10.14□□□□□ -0.79
LINC01040-201ENST00000425048 BSNDQ8WZ55 320 aa10.14□□□□□ -0.79
LINC01040-201ENST00000425048 NXPE3Q969Y0 559 aa10.14□□□□□ -0.79
LINC01040-201ENST00000425048 HHIPQ96QV1 700 aa10.14□□□□□ -0.79
LINC01040-201ENST00000425048 HIF3AQ9Y2N7 669 aa10.14□□□□□ -0.79
LINC01040-201ENST00000425048 PREPP48147 710 aa10.13□□□□□ -0.79
LINC01040-201ENST00000425048 IRAK1P51617 712 aa10.13□□□□□ -0.79
LINC01040-201ENST00000425048 KRTAP1-3Q8IUG1 177 aa10.13□□□□□ -0.79
LINC01040-201ENST00000425048 POLIQ9UNA4 740 aa10.13□□□□□ -0.79
LINC01040-201ENST00000425048 PRR19A6NJB7 356 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms