RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 BABAM1Q9NWV8 329 aa17.5■□□□□ 0.39
SHISA9-201ENST00000423335 LMTK2Q8IWU2 1503 aa17.5■□□□□ 0.39
SHISA9-201ENST00000423335 HSP90B2PQ58FF3 399 aa17.5■□□□□ 0.39
SHISA9-201ENST00000423335 Q6ZUG5 572 aa17.5■□□□□ 0.39
SHISA9-201ENST00000423335 PIK3C2BO00750 1634 aa17.5■□□□□ 0.39
SHISA9-201ENST00000423335 PTPRMP28827 1452 aa17.5■□□□□ 0.39
SHISA9-201ENST00000423335 GOLGA8BA8MQT2 603 aa17.5■□□□□ 0.39
SHISA9-201ENST00000423335 TRIM22Q8IYM9 498 aa17.5■□□□□ 0.39
SHISA9-201ENST00000423335 SYNE4Q8N205 404 aa17.49■□□□□ 0.39
SHISA9-201ENST00000423335 SGSM2O43147 1006 aa17.49■□□□□ 0.39
SHISA9-201ENST00000423335 SKILP12757 684 aa17.49■□□□□ 0.39
SHISA9-201ENST00000423335 CRKLP46109 303 aaKnown RBP17.49■□□□□ 0.39
SHISA9-201ENST00000423335 LRRC24Q50LG9 513 aa17.49■□□□□ 0.39
SHISA9-201ENST00000423335 USPL1Q5W0Q7 1092 aa17.49■□□□□ 0.39
SHISA9-201ENST00000423335 ZC3H12CQ9C0D7 883 aaKnown RBP17.49■□□□□ 0.39
SHISA9-201ENST00000423335 NEXMIFQ5QGS0 1516 aa17.49■□□□□ 0.39
SHISA9-201ENST00000423335 PUS3Q9BZE2 481 aaKnown RBP17.49■□□□□ 0.39
SHISA9-201ENST00000423335 PPP1R9BQ96SB3 815 aa17.48■□□□□ 0.39
SHISA9-201ENST00000423335 VAT1LQ9HCJ6 419 aa17.48■□□□□ 0.39
SHISA9-201ENST00000423335 CGNQ9P2M7 1197 aaKnown RBP17.48■□□□□ 0.39
SHISA9-201ENST00000423335 TCEAL9Q9UHQ7 104 aa17.48■□□□□ 0.39
SHISA9-201ENST00000423335 STX8Q9UNK0 236 aa17.48■□□□□ 0.39
SHISA9-201ENST00000423335 ARHGEF40Q8TER5 1519 aa17.48■□□□□ 0.39
SHISA9-201ENST00000423335 PDIA4P13667 645 aaKnown RBP17.48■□□□□ 0.39
SHISA9-201ENST00000423335 XBP1P17861 261 aa17.48■□□□□ 0.39
SHISA9-201ENST00000423335 RBM26Q5T8P6 1007 aaKnown RBP17.48■□□□□ 0.39
SHISA9-201ENST00000423335 FAM196AQ6ZSG2 479 aa17.48■□□□□ 0.39
SHISA9-201ENST00000423335 POLR3GO15318 223 aaPredicted RBP17.48■□□□□ 0.39
SHISA9-201ENST00000423335 PICALMQ13492 652 aa17.48■□□□□ 0.39
SHISA9-201ENST00000423335 EAF2Q96CJ1 260 aaPredicted RBP17.48■□□□□ 0.39
SHISA9-201ENST00000423335 ORC3Q9UBD5 711 aaPredicted RBP17.48■□□□□ 0.39
SHISA9-201ENST00000423335 CCDC66A2RUB6 948 aa17.47■□□□□ 0.39
SHISA9-201ENST00000423335 NAP1L1P55209 391 aaKnown RBP17.47■□□□□ 0.39
SHISA9-201ENST00000423335 TNNI3KQ59H18 835 aa17.47■□□□□ 0.39
SHISA9-201ENST00000423335 CEP135Q66GS9 1140 aa17.47■□□□□ 0.39
SHISA9-201ENST00000423335 SEPT12Q8IYM1 358 aa17.47■□□□□ 0.39
SHISA9-201ENST00000423335 CPLX3Q8WVH0 158 aa17.47■□□□□ 0.39
SHISA9-201ENST00000423335 FPGT-TNNI3KV9GXZ4 949 aa17.47■□□□□ 0.39
SHISA9-201ENST00000423335 MAGEB6Q8N7X4 407 aa17.47■□□□□ 0.39
SHISA9-201ENST00000423335 PARP3Q9Y6F1 533 aa17.47■□□□□ 0.39
SHISA9-201ENST00000423335 C1orf167Q5SNV9 1468 aa17.46■□□□□ 0.39
SHISA9-201ENST00000423335 SNAP23O00161 211 aa17.46■□□□□ 0.39
SHISA9-201ENST00000423335 ZSWIM4Q9H7M6 989 aa17.46■□□□□ 0.39
SHISA9-201ENST00000423335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.46■□□□□ 0.39
SHISA9-201ENST00000423335 TRPC5Q9UL62 973 aaPredicted RBP17.46■□□□□ 0.39
SHISA9-201ENST00000423335 STX1AQ16623 288 aa17.46■□□□□ 0.39
SHISA9-201ENST00000423335 RUFY3Q7L099 469 aa17.46■□□□□ 0.39
SHISA9-201ENST00000423335 XAGE2Q96GT9 111 aa17.46■□□□□ 0.39
SHISA9-201ENST00000423335 SLC4A4Q9Y6R1 1079 aa17.46■□□□□ 0.39
SHISA9-201ENST00000423335 FRMPD1Q5SYB0 1578 aa17.46■□□□□ 0.39
SHISA9-201ENST00000423335 RXRAP19793 462 aa17.46■□□□□ 0.39
SHISA9-201ENST00000423335 NAA16Q6N069 864 aaPredicted RBP17.46■□□□□ 0.39
SHISA9-201ENST00000423335 PPFIBP1Q86W92 1011 aa17.46■□□□□ 0.39
SHISA9-201ENST00000423335 AOPEPQ8N6M6 819 aa17.46■□□□□ 0.39
SHISA9-201ENST00000423335 PDE8AO60658 829 aa17.45■□□□□ 0.38
SHISA9-201ENST00000423335 ZNF444Q8N0Y2 327 aaPredicted RBP17.45■□□□□ 0.38
SHISA9-201ENST00000423335 TMOD2Q9NZR1 351 aa17.45■□□□□ 0.38
SHISA9-201ENST00000423335 SRP68Q9UHB9 627 aaKnown RBP17.45■□□□□ 0.38
SHISA9-201ENST00000423335 CCDC171Q6TFL3 1326 aa17.45■□□□□ 0.38
SHISA9-201ENST00000423335 ERCC4Q92889 916 aaPredicted RBP17.45■□□□□ 0.38
SHISA9-201ENST00000423335 APOBRQ0VD83 1088 aa17.45■□□□□ 0.38
SHISA9-201ENST00000423335 FILIP1LQ4L180 1135 aa17.45■□□□□ 0.38
SHISA9-201ENST00000423335 CPS1P31327 1500 aa17.45■□□□□ 0.38
SHISA9-201ENST00000423335 SMTNL1A8MU46 457 aa17.44■□□□□ 0.38
SHISA9-201ENST00000423335 MARCKSP29966 332 aaPredicted RBP17.44■□□□□ 0.38
SHISA9-201ENST00000423335 MCMDC2Q4G0Z9 681 aa17.44■□□□□ 0.38
SHISA9-201ENST00000423335 BRMS1Q9HCU9 246 aa17.44■□□□□ 0.38
SHISA9-201ENST00000423335 LMOD1P29536 600 aaPredicted RBP17.44■□□□□ 0.38
SHISA9-201ENST00000423335 TSPY2A6NKD2 308 aa17.44■□□□□ 0.38
SHISA9-201ENST00000423335 RASEFQ8IZ41 740 aa17.44■□□□□ 0.38
SHISA9-201ENST00000423335 NYXQ9GZU5 481 aa17.44■□□□□ 0.38
SHISA9-201ENST00000423335 GREM2Q9H772 168 aa17.44■□□□□ 0.38
SHISA9-201ENST00000423335 ANKARQ7Z5J8 1434 aa17.44■□□□□ 0.38
SHISA9-201ENST00000423335 RAD50Q92878 1312 aa17.44■□□□□ 0.38
SHISA9-201ENST00000423335 UQCRFS1P1P0C7P4 283 aa17.44■□□□□ 0.38
SHISA9-201ENST00000423335 TOP1P11387 765 aaKnown RBP17.44■□□□□ 0.38
SHISA9-201ENST00000423335 HSPA4P34932 840 aa17.44■□□□□ 0.38
SHISA9-201ENST00000423335 CAGE1Q8TC20 777 aa17.44■□□□□ 0.38
SHISA9-201ENST00000423335 TRMT1LQ7Z2T5 733 aaKnown RBP17.43■□□□□ 0.38
SHISA9-201ENST00000423335 CTAGE5O15320 804 aa17.43■□□□□ 0.38
SHISA9-201ENST00000423335 TMEM67Q5HYA8 995 aa17.43■□□□□ 0.38
SHISA9-201ENST00000423335 CDC37L1Q7L3B6 337 aa17.43■□□□□ 0.38
SHISA9-201ENST00000423335 ZKSCAN3Q9BRR0 538 aa17.43■□□□□ 0.38
SHISA9-201ENST00000423335 AGLP35573 1532 aa17.43■□□□□ 0.38
SHISA9-201ENST00000423335 CDK12Q9NYV4 1490 aaPredicted RBP17.43■□□□□ 0.38
SHISA9-201ENST00000423335 CCP110O43303 1012 aa17.43■□□□□ 0.38
SHISA9-201ENST00000423335 HMGB1P09429 215 aaKnown RBP17.43■□□□□ 0.38
SHISA9-201ENST00000423335 SNW1Q13573 536 aaKnown RBP17.43■□□□□ 0.38
SHISA9-201ENST00000423335 TMCO3Q6UWJ1 677 aa17.43■□□□□ 0.38
SHISA9-201ENST00000423335 IQCA1Q86XH1 822 aa17.43■□□□□ 0.38
SHISA9-201ENST00000423335 SEC62Q99442 399 aaKnown RBP17.43■□□□□ 0.38
SHISA9-201ENST00000423335 KLF18A0A0U1RQI7 1052 aa17.42■□□□□ 0.38
SHISA9-201ENST00000423335 PTH1RQ03431 593 aa17.42■□□□□ 0.38
SHISA9-201ENST00000423335 TTF1Q15361 905 aaPredicted RBP17.42■□□□□ 0.38
SHISA9-201ENST00000423335 HLFQ16534 295 aa17.42■□□□□ 0.38
SHISA9-201ENST00000423335 CCDC70Q6NSX1 233 aa17.42■□□□□ 0.38
SHISA9-201ENST00000423335 SEC31BQ9NQW1 1179 aa17.42■□□□□ 0.38
SHISA9-201ENST00000423335 HMG20BQ9P0W2 317 aa17.42■□□□□ 0.38
SHISA9-201ENST00000423335 QRICH2Q9H0J4 1663 aa17.42■□□□□ 0.38
SHISA9-201ENST00000423335 AFF2P51816 1311 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms