RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 ATP5JP18859 108 aa10.95□□□□□ -0.66
HPS4-204ENST00000422379 ZNF622Q969S3 477 aaKnown RBP eCLIP10.95□□□□□ -0.662e-6■□□□□ 11.1
HPS4-204ENST00000422379 AKAP2Q9Y2D5 859 aa10.95□□□□□ -0.66
HPS4-204ENST00000422379 SLX4Q8IY92 1834 aa10.95□□□□□ -0.66
HPS4-204ENST00000422379 SNED1Q8TER0 1413 aa10.95□□□□□ -0.66
HPS4-204ENST00000422379 H0YIN7 160 aa10.94□□□□□ -0.66
HPS4-204ENST00000422379 SOCS7O14512 581 aa10.94□□□□□ -0.66
HPS4-204ENST00000422379 BBOX1O75936 387 aa10.94□□□□□ -0.66
HPS4-204ENST00000422379 BCAMP50895 628 aa10.94□□□□□ -0.66
HPS4-204ENST00000422379 CCDC102BQ68D86 513 aa10.94□□□□□ -0.66
HPS4-204ENST00000422379 PRPF40BQ6NWY9 871 aaKnown RBP10.94□□□□□ -0.66
HPS4-204ENST00000422379 C7orf43Q8WVR3 580 aa10.94□□□□□ -0.66
HPS4-204ENST00000422379 IL25Q9H293 177 aa10.94□□□□□ -0.66
HPS4-204ENST00000422379 COL1A1P02452 1464 aaPredicted RBP10.94□□□□□ -0.66
HPS4-204ENST00000422379 GLRX3O76003 335 aaKnown RBP10.94□□□□□ -0.66
HPS4-204ENST00000422379 MCAMP43121 646 aa10.94□□□□□ -0.66
HPS4-204ENST00000422379 GYG1P46976 350 aa10.94□□□□□ -0.66
HPS4-204ENST00000422379 STYK1Q6J9G0 422 aa10.94□□□□□ -0.66
HPS4-204ENST00000422379 TBC1D9Q6ZT07 1266 aa10.94□□□□□ -0.66
HPS4-204ENST00000422379 ANTXR1Q9H6X2 564 aa10.94□□□□□ -0.66
HPS4-204ENST00000422379 SNRKQ9NRH2 765 aa10.94□□□□□ -0.66
HPS4-204ENST00000422379 POLLQ9UGP5 575 aa10.94□□□□□ -0.66
HPS4-204ENST00000422379 WWC3Q9ULE0 1092 aa10.94□□□□□ -0.66
HPS4-204ENST00000422379 ATP6V0A2Q9Y487 856 aa10.94□□□□□ -0.66
HPS4-204ENST00000422379 CACNA1SQ13698 1873 aa10.93□□□□□ -0.66
HPS4-204ENST00000422379 SLFNL1Q499Z3 407 aa10.93□□□□□ -0.66
HPS4-204ENST00000422379 DDRGK1Q96HY6 314 aa10.93□□□□□ -0.66
HPS4-204ENST00000422379 FAM84BQ96KN1 310 aaPredicted RBP10.93□□□□□ -0.66
HPS4-204ENST00000422379 HAUS7Q99871 368 aa10.93□□□□□ -0.66
HPS4-204ENST00000422379 DLEC1Q9Y238 1755 aa10.93□□□□□ -0.66
HPS4-204ENST00000422379 ZNF804BA4D1E1 1349 aa10.92□□□□□ -0.66
HPS4-204ENST00000422379 SLC5A1P13866 664 aa10.92□□□□□ -0.66
HPS4-204ENST00000422379 POLD1P28340 1107 aa10.92□□□□□ -0.66
HPS4-204ENST00000422379 RASGRF1Q13972 1273 aa10.92□□□□□ -0.66
HPS4-204ENST00000422379 UBE4AQ14139 1066 aa10.92□□□□□ -0.66
HPS4-204ENST00000422379 SP8Q8IXZ3 490 aa10.92□□□□□ -0.66
HPS4-204ENST00000422379 ZNF219Q9P2Y4 722 aaPredicted RBP10.92□□□□□ -0.66
HPS4-204ENST00000422379 NSFL1CQ9UNZ2 370 aaKnown RBP10.92□□□□□ -0.66
HPS4-204ENST00000422379 IQSEC3Q9UPP2 1182 aaPredicted RBP10.92□□□□□ -0.66
HPS4-204ENST00000422379 AKAP11Q9UKA4 1901 aa10.92□□□□□ -0.66
HPS4-204ENST00000422379 XDHP47989 1333 aa10.92□□□□□ -0.66
HPS4-204ENST00000422379 TRIM6-TRIM34B2RNG4 842 aa10.92□□□□□ -0.66
HPS4-204ENST00000422379 ARID4AP29374 1257 aaPredicted RBP10.92□□□□□ -0.66
HPS4-204ENST00000422379 NLGN2Q8NFZ4 835 aa10.92□□□□□ -0.66
HPS4-204ENST00000422379 TBC1D16Q8TBP0 767 aa10.92□□□□□ -0.66
HPS4-204ENST00000422379 RILPL2Q969X0 211 aa10.92□□□□□ -0.66
HPS4-204ENST00000422379 GPATCH3Q96I76 525 aa10.92□□□□□ -0.66
HPS4-204ENST00000422379 DNAJC2Q99543 621 aaKnown RBP10.92□□□□□ -0.66
HPS4-204ENST00000422379 ANKRD2Q9GZV1 360 aa10.92□□□□□ -0.66
HPS4-204ENST00000422379 PODXL2Q9NZ53 605 aa10.92□□□□□ -0.66
HPS4-204ENST00000422379 ANKIB1Q9P2G1 1089 aa10.92□□□□□ -0.66
HPS4-204ENST00000422379 ERC2O15083 957 aa10.91□□□□□ -0.66
HPS4-204ENST00000422379 IFIT1P09914 478 aaKnown RBP10.91□□□□□ -0.66
HPS4-204ENST00000422379 ALDH1B1P30837 517 aa10.91□□□□□ -0.66
HPS4-204ENST00000422379 ZAP70P43403 619 aa10.91□□□□□ -0.66
HPS4-204ENST00000422379 TTC39AQ5SRH9 613 aa10.91□□□□□ -0.66
HPS4-204ENST00000422379 FBXO33Q7Z6M2 555 aa10.91□□□□□ -0.66
HPS4-204ENST00000422379 HMG20BQ9P0W2 317 aa10.91□□□□□ -0.66
HPS4-204ENST00000422379 GOLIM4O00461 696 aa10.9□□□□□ -0.66
HPS4-204ENST00000422379 UFL1O94874 794 aa10.9□□□□□ -0.66
HPS4-204ENST00000422379 GORABQ5T7V8 394 aa10.9□□□□□ -0.66
HPS4-204ENST00000422379 ZNF512BQ96KM6 892 aaPredicted RBP10.9□□□□□ -0.66
HPS4-204ENST00000422379 PPP1R1BQ9UD71 204 aaPredicted RBP10.9□□□□□ -0.66
HPS4-204ENST00000422379 CDC45O75419 566 aa10.9□□□□□ -0.67
HPS4-204ENST00000422379 CYP2E1P05181 493 aaPredicted RBP10.9□□□□□ -0.67
HPS4-204ENST00000422379 CHMLP26374 656 aa10.9□□□□□ -0.67
HPS4-204ENST00000422379 CCDC158Q5M9N0 1113 aa10.9□□□□□ -0.67
HPS4-204ENST00000422379 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.9□□□□□ -0.67
HPS4-204ENST00000422379 PIH1D3Q9NQM4 214 aaKnown RBP10.9□□□□□ -0.67
HPS4-204ENST00000422379 LEMD3Q9Y2U8 911 aa10.9□□□□□ -0.67
HPS4-204ENST00000422379 C21orf2O43822 256 aa10.89□□□□□ -0.67
HPS4-204ENST00000422379 KCNJ4P48050 445 aa10.89□□□□□ -0.67
HPS4-204ENST00000422379 FKBP4Q02790 459 aaKnown RBP eCLIP10.89□□□□□ -0.67
HPS4-204ENST00000422379 TMC4Q7Z404 712 aa10.89□□□□□ -0.67
HPS4-204ENST00000422379 KLHL34Q8N239 644 aa10.89□□□□□ -0.67
HPS4-204ENST00000422379 CNKSR1Q969H4 720 aa10.89□□□□□ -0.67
HPS4-204ENST00000422379 PAG1Q9NWQ8 432 aa10.89□□□□□ -0.67
HPS4-204ENST00000422379 GGA1Q9UJY5 639 aa10.89□□□□□ -0.67
HPS4-204ENST00000422379 BRCA1P38398 1863 aaKnown RBP10.89□□□□□ -0.67
HPS4-204ENST00000422379 TGFB2P61812 414 aa10.88□□□□□ -0.67
HPS4-204ENST00000422379 C15orf52Q6ZUT6 534 aaKnown RBP10.88□□□□□ -0.67
HPS4-204ENST00000422379 TTLL6Q8N841 843 aa10.88□□□□□ -0.67
HPS4-204ENST00000422379 SPATA5Q8NB90 893 aa10.88□□□□□ -0.67
HPS4-204ENST00000422379 EVI5LQ96CN4 794 aa10.88□□□□□ -0.67
HPS4-204ENST00000422379 FAM227BQ96M60 508 aa10.88□□□□□ -0.67
HPS4-204ENST00000422379 TBC1D32Q96NH3 1257 aa10.88□□□□□ -0.67
HPS4-204ENST00000422379 UPF2Q9HAU5 1272 aaKnown RBP10.88□□□□□ -0.67
HPS4-204ENST00000422379 SPON1Q9HCB6 807 aa10.88□□□□□ -0.67
HPS4-204ENST00000422379 JAG2Q9Y219 1238 aa10.88□□□□□ -0.67
HPS4-204ENST00000422379 ATP2B4P23634 1241 aa10.88□□□□□ -0.67
HPS4-204ENST00000422379 CNTROBQ8N137 903 aa10.88□□□□□ -0.67
HPS4-204ENST00000422379 MPNDQ8N594 471 aa10.88□□□□□ -0.67
HPS4-204ENST00000422379 CD2APQ9Y5K6 639 aa10.88□□□□□ -0.67
HPS4-204ENST00000422379 COL4A5P29400 1685 aa10.87□□□□□ -0.67
HPS4-204ENST00000422379 A0A0D9SFI3 127 aa10.87□□□□□ -0.67
HPS4-204ENST00000422379 C6orf229H3BNL8 230 aa10.87□□□□□ -0.67
HPS4-204ENST00000422379 RIMBP2O15034 1052 aa10.87□□□□□ -0.67
HPS4-204ENST00000422379 HIBADHP31937 336 aaKnown RBP10.87□□□□□ -0.67
HPS4-204ENST00000422379 DPP8Q6V1X1 898 aaPredicted RBP10.87□□□□□ -0.67
HPS4-204ENST00000422379 KBTBD3Q8NAB2 608 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms