RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 ATP11AP98196 1134 aa6.87□□□□□ -1.31
SEMA3A-202ENST00000420047 TXNDC11Q6PKC3 985 aa6.87□□□□□ -1.31
SEMA3A-202ENST00000420047 FAM20CQ8IXL6 584 aa6.87□□□□□ -1.31
SEMA3A-202ENST00000420047 ACIN1Q9UKV3 1341 aaKnown RBP6.86□□□□□ -1.31
SEMA3A-202ENST00000420047 FAM177BA6PVY3 158 aa6.86□□□□□ -1.31
SEMA3A-202ENST00000420047 ADAMTS4O75173 837 aa6.86□□□□□ -1.31
SEMA3A-202ENST00000420047 SCNN1AP37088 669 aa6.86□□□□□ -1.31
SEMA3A-202ENST00000420047 CFAP70Q5T0N1 1121 aa6.86□□□□□ -1.31
SEMA3A-202ENST00000420047 ANKRD34AQ69YU3 496 aa6.86□□□□□ -1.31
SEMA3A-202ENST00000420047 WNT8BQ93098 351 aa6.86□□□□□ -1.31
SEMA3A-202ENST00000420047 PRIMPOLQ96LW4 560 aa6.86□□□□□ -1.31
SEMA3A-202ENST00000420047 PBX4Q9BYU1 374 aa6.86□□□□□ -1.31
SEMA3A-202ENST00000420047 ADAM19Q9H013 955 aa6.86□□□□□ -1.31
SEMA3A-202ENST00000420047 SAP130Q9H0E3 1048 aa6.86□□□□□ -1.31
SEMA3A-202ENST00000420047 RASSF4Q9H2L5 321 aa6.86□□□□□ -1.31
SEMA3A-202ENST00000420047 SEC31BQ9NQW1 1179 aa6.86□□□□□ -1.31
SEMA3A-202ENST00000420047 NOVA2Q9UNW9 492 aaKnown RBP6.86□□□□□ -1.31
SEMA3A-202ENST00000420047 SART1O43290 800 aaKnown RBP6.85□□□□□ -1.31
SEMA3A-202ENST00000420047 PTPRAP18433 802 aa6.85□□□□□ -1.31
SEMA3A-202ENST00000420047 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.85□□□□□ -1.31
SEMA3A-202ENST00000420047 HIF3AQ9Y2N7 669 aa6.85□□□□□ -1.31
SEMA3A-202ENST00000420047 TNFRSF10BO14763 440 aa6.84□□□□□ -1.31
SEMA3A-202ENST00000420047 OCLNQ16625 522 aa6.84□□□□□ -1.31
SEMA3A-202ENST00000420047 CEP120Q8N960 986 aa6.84□□□□□ -1.31
SEMA3A-202ENST00000420047 FOXD4L4Q8WXT5 416 aaPredicted RBP6.84□□□□□ -1.31
SEMA3A-202ENST00000420047 CARD10Q9BWT7 1032 aa6.84□□□□□ -1.31
SEMA3A-202ENST00000420047 OSGEPQ9NPF4 335 aa6.84□□□□□ -1.31
SEMA3A-202ENST00000420047 ABI2Q9NYB9 513 aaPredicted RBP6.84□□□□□ -1.31
SEMA3A-202ENST00000420047 PRMT3O60678 531 aa6.83□□□□□ -1.32
SEMA3A-202ENST00000420047 ADAM11O75078 769 aa6.83□□□□□ -1.32
SEMA3A-202ENST00000420047 BMP3P12645 472 aa6.83□□□□□ -1.32
SEMA3A-202ENST00000420047 EPHA1P21709 976 aa6.83□□□□□ -1.32
SEMA3A-202ENST00000420047 CDC25BP30305 580 aa6.83□□□□□ -1.32
SEMA3A-202ENST00000420047 ZAP70P43403 619 aa6.83□□□□□ -1.32
SEMA3A-202ENST00000420047 PIP4K2BP78356 416 aa6.83□□□□□ -1.32
SEMA3A-202ENST00000420047 ELOAQ14241 798 aaKnown RBP6.83□□□□□ -1.32
SEMA3A-202ENST00000420047 BEND4Q6ZU67 534 aa6.83□□□□□ -1.32
SEMA3A-202ENST00000420047 SHKBP1Q8TBC3 707 aa6.83□□□□□ -1.32
SEMA3A-202ENST00000420047 KLHDC7BQ96G42 594 aa6.83□□□□□ -1.32
SEMA3A-202ENST00000420047 RNF208Q9H0X6 261 aa6.83□□□□□ -1.32
SEMA3A-202ENST00000420047 DCAF1Q9Y4B6 1507 aa6.82□□□□□ -1.32
SEMA3A-202ENST00000420047 CABP4P57796 275 aa6.82□□□□□ -1.32
SEMA3A-202ENST00000420047 FZD5Q13467 585 aa6.82□□□□□ -1.32
SEMA3A-202ENST00000420047 FAM26DQ5JW98 314 aa6.82□□□□□ -1.32
SEMA3A-202ENST00000420047 ADAMTSL4Q6UY14 1074 aa6.82□□□□□ -1.32
SEMA3A-202ENST00000420047 NCAPG2Q86XI2 1143 aa6.82□□□□□ -1.32
SEMA3A-202ENST00000420047 UBASH3BQ8TF42 649 aa6.82□□□□□ -1.32
SEMA3A-202ENST00000420047 POP1Q99575 1024 aaKnown RBP6.82□□□□□ -1.32
SEMA3A-202ENST00000420047 KCNF1Q9H3M0 494 aa6.82□□□□□ -1.32
SEMA3A-202ENST00000420047 SH2B1Q9NRF2 756 aaPredicted RBP6.82□□□□□ -1.32
SEMA3A-202ENST00000420047 ADGRE2Q9UHX3 823 aa6.82□□□□□ -1.32
SEMA3A-202ENST00000420047 CC2D2AQ9P2K1 1620 aa6.81□□□□□ -1.32
SEMA3A-202ENST00000420047 MEGF11A6BM72 1044 aa6.81□□□□□ -1.32
SEMA3A-202ENST00000420047 H3BRJ5 948 aa6.81□□□□□ -1.32
SEMA3A-202ENST00000420047 DDX3YO15523 660 aaKnown RBP6.81□□□□□ -1.32
SEMA3A-202ENST00000420047 FAM69CQ0P6D2 419 aa6.81□□□□□ -1.32
SEMA3A-202ENST00000420047 PDE12Q6L8Q7 609 aaKnown RBP6.81□□□□□ -1.32
SEMA3A-202ENST00000420047 GIMAP7Q8NHV1 300 aa6.81□□□□□ -1.32
SEMA3A-202ENST00000420047 STIM2Q9P246 746 aa6.81□□□□□ -1.32
SEMA3A-202ENST00000420047 CDCA8Q53HL2 280 aa6.8□□□□□ -1.32
SEMA3A-202ENST00000420047 ABTB2Q8N961 1025 aa6.8□□□□□ -1.32
SEMA3A-202ENST00000420047 GPR152Q8TDT2 470 aa6.8□□□□□ -1.32
SEMA3A-202ENST00000420047 PIM2Q9P1W9 311 aa6.8□□□□□ -1.32
SEMA3A-202ENST00000420047 CECR2Q9BXF3 1484 aa6.79□□□□□ -1.32
SEMA3A-202ENST00000420047 WDR64B1ANS9 1081 aa6.79□□□□□ -1.32
SEMA3A-202ENST00000420047 RPLP1P05386 114 aaKnown RBP6.79□□□□□ -1.32
SEMA3A-202ENST00000420047 PREPP48147 710 aa6.79□□□□□ -1.32
SEMA3A-202ENST00000420047 CPSF6Q16630 551 aaKnown RBP eCLIP6.79□□□□□ -1.32
SEMA3A-202ENST00000420047 FDX2Q6P4F2 183 aa6.79□□□□□ -1.32
SEMA3A-202ENST00000420047 ELP3Q9H9T3 547 aa6.79□□□□□ -1.32
SEMA3A-202ENST00000420047 CXXC1Q9P0U4 656 aaPredicted RBP6.79□□□□□ -1.32
SEMA3A-202ENST00000420047 CYP2E1P05181 493 aaPredicted RBP6.78□□□□□ -1.32
SEMA3A-202ENST00000420047 RUSC1Q9BVN2 902 aa6.78□□□□□ -1.32
SEMA3A-202ENST00000420047 ATG3Q9NT62 314 aa6.78□□□□□ -1.32
SEMA3A-202ENST00000420047 SALL4Q9UJQ4 1053 aa6.78□□□□□ -1.32
SEMA3A-202ENST00000420047 ZMIZ1Q9ULJ6 1067 aa6.78□□□□□ -1.32
SEMA3A-202ENST00000420047 PRKCSHP14314 528 aaPredicted RBP6.77□□□□□ -1.33
SEMA3A-202ENST00000420047 ARL4DP49703 201 aa6.77□□□□□ -1.33
SEMA3A-202ENST00000420047 NAA30Q147X3 362 aaPredicted RBP6.77□□□□□ -1.33
SEMA3A-202ENST00000420047 XKR5Q6UX68 686 aa6.77□□□□□ -1.33
SEMA3A-202ENST00000420047 ZMYND15Q9H091 742 aa6.77□□□□□ -1.33
SEMA3A-202ENST00000420047 LEMD3Q9Y2U8 911 aa6.77□□□□□ -1.33
SEMA3A-202ENST00000420047 SHROOM4Q9ULL8 1493 aa6.77□□□□□ -1.33
SEMA3A-202ENST00000420047 EIF4G1Q04637 1599 aaKnown RBP6.77□□□□□ -1.33
SEMA3A-202ENST00000420047 NFKBIEO00221 500 aa6.76□□□□□ -1.33
SEMA3A-202ENST00000420047 ZBTB39O15060 712 aa6.76□□□□□ -1.33
SEMA3A-202ENST00000420047 GAS2O43903 313 aaKnown RBP6.76□□□□□ -1.33
SEMA3A-202ENST00000420047 MAP4P27816 1152 aaKnown RBP6.76□□□□□ -1.33
SEMA3A-202ENST00000420047 HOXA10P31260 410 aaPredicted RBP6.76□□□□□ -1.33
SEMA3A-202ENST00000420047 LCE1DQ5T752 114 aa6.76□□□□□ -1.33
SEMA3A-202ENST00000420047 CAPN12Q6ZSI9 719 aa6.76□□□□□ -1.33
SEMA3A-202ENST00000420047 MFSD14AQ96MC6 490 aa6.76□□□□□ -1.33
SEMA3A-202ENST00000420047 MKNK1Q9BUB5 465 aa6.76□□□□□ -1.33
SEMA3A-202ENST00000420047 TMEM63CQ9P1W3 806 aa6.76□□□□□ -1.33
SEMA3A-202ENST00000420047 ANGEL1Q9UNK9 670 aaKnown RBP6.76□□□□□ -1.33
SEMA3A-202ENST00000420047 PDE2AO00408 941 aaPredicted RBP6.75□□□□□ -1.33
SEMA3A-202ENST00000420047 PRNPP04156 253 aa6.75□□□□□ -1.33
SEMA3A-202ENST00000420047 FOSL1P15407 271 aa6.75□□□□□ -1.33
SEMA3A-202ENST00000420047 NLRP12P59046 1061 aa6.75□□□□□ -1.33
SEMA3A-202ENST00000420047 C19orf57Q0VDD7 668 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms