RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 CCT2P78371 535 aaKnown RBP9.75□□□□□ -0.85
UBR4-206ENST00000419533 TTC22Q5TAA0 569 aa9.75□□□□□ -0.85
UBR4-206ENST00000419533 IRS4O14654 1257 aaPredicted RBP9.75□□□□□ -0.85
UBR4-206ENST00000419533 CTAGE5O15320 804 aa9.75□□□□□ -0.85
UBR4-206ENST00000419533 NEFHP12036 1026 aa9.75□□□□□ -0.85
UBR4-206ENST00000419533 GNAQP50148 359 aa9.75□□□□□ -0.85
UBR4-206ENST00000419533 WTAPQ15007 396 aa9.75□□□□□ -0.85
UBR4-206ENST00000419533 KIAA1328Q86T90 577 aa9.75□□□□□ -0.85
UBR4-206ENST00000419533 F8W031 263 aaPredicted RBP9.75□□□□□ -0.85
UBR4-206ENST00000419533 SSR1P43307 286 aaKnown RBP9.75□□□□□ -0.85
UBR4-206ENST00000419533 HAND2P61296 217 aa9.75□□□□□ -0.85
UBR4-206ENST00000419533 ZRSR2Q15696 482 aaKnown RBP9.75□□□□□ -0.85
UBR4-206ENST00000419533 CFAP100Q494V2 611 aa9.75□□□□□ -0.85
UBR4-206ENST00000419533 USP31Q70CQ4 1352 aa9.75□□□□□ -0.85
UBR4-206ENST00000419533 GUCY1B3Q02153 619 aa9.74□□□□□ -0.85
UBR4-206ENST00000419533 CETN1Q12798 172 aa9.74□□□□□ -0.85
UBR4-206ENST00000419533 SEPT7Q16181 437 aaKnown RBP9.74□□□□□ -0.85
UBR4-206ENST00000419533 PARP10Q53GL7 1025 aa9.74□□□□□ -0.85
UBR4-206ENST00000419533 SLC27A3Q5K4L6 730 aa9.74□□□□□ -0.85
UBR4-206ENST00000419533 CNBD1Q8NA66 436 aa9.74□□□□□ -0.85
UBR4-206ENST00000419533 CPSF1Q10570 1443 aaKnown RBP9.74□□□□□ -0.85
UBR4-206ENST00000419533 ATP8B2P98198 1209 aa9.74□□□□□ -0.85
UBR4-206ENST00000419533 GRPEL1Q9HAV7 217 aa9.74□□□□□ -0.85
UBR4-206ENST00000419533 STX8Q9UNK0 236 aa9.74□□□□□ -0.85
UBR4-206ENST00000419533 B4DLN1 442 aa9.74□□□□□ -0.85
UBR4-206ENST00000419533 GNAT2P19087 354 aa9.74□□□□□ -0.85
UBR4-206ENST00000419533 MRPL12P52815 198 aaKnown RBP9.74□□□□□ -0.85
UBR4-206ENST00000419533 ZNF790Q6PG37 636 aa9.74□□□□□ -0.85
UBR4-206ENST00000419533 MICU3Q86XE3 530 aa9.74□□□□□ -0.85
UBR4-206ENST00000419533 ESPNB1AK53 854 aa9.74□□□□□ -0.85
UBR4-206ENST00000419533 H0YIN7 160 aa9.74□□□□□ -0.85
UBR4-206ENST00000419533 LMOD1P29536 600 aaPredicted RBP9.74□□□□□ -0.85
UBR4-206ENST00000419533 MRPL50Q8N5N7 158 aaKnown RBP9.74□□□□□ -0.85
UBR4-206ENST00000419533 CCDC148Q8NFR7 591 aa9.74□□□□□ -0.85
UBR4-206ENST00000419533 SAMM50Q9Y512 469 aa9.74□□□□□ -0.85
UBR4-206ENST00000419533 SPA17Q15506 151 aa9.74□□□□□ -0.85
UBR4-206ENST00000419533 ERMNQ8TAM6 284 aa9.74□□□□□ -0.85
UBR4-206ENST00000419533 ORC3Q9UBD5 711 aaPredicted RBP9.74□□□□□ -0.85
UBR4-206ENST00000419533 SPATA31A1Q5TZJ5 1347 aa9.73□□□□□ -0.85
UBR4-206ENST00000419533 IFIT1BQ5T764 474 aaKnown RBP9.73□□□□□ -0.85
UBR4-206ENST00000419533 CACNA2D4Q7Z3S7 1137 aa9.73□□□□□ -0.85
UBR4-206ENST00000419533 CNNM3Q8NE01 707 aa9.73□□□□□ -0.85
UBR4-206ENST00000419533 QRICH2Q9H0J4 1663 aa9.73□□□□□ -0.85
UBR4-206ENST00000419533 MAGEB6P1A0A0J9YX57 407 aa9.73□□□□□ -0.85
UBR4-206ENST00000419533 NBPF7P0C2Y1 421 aaPredicted RBP9.73□□□□□ -0.85
UBR4-206ENST00000419533 PICALMQ13492 652 aa9.73□□□□□ -0.85
UBR4-206ENST00000419533 SKIDA1Q1XH10 827 aa9.73□□□□□ -0.85
UBR4-206ENST00000419533 SLC4A8Q2Y0W8 1093 aa9.73□□□□□ -0.85
UBR4-206ENST00000419533 SLC26A6Q9BXS9 759 aa9.73□□□□□ -0.85
UBR4-206ENST00000419533 SPATA31A5Q5VU36 1347 aa9.73□□□□□ -0.85
UBR4-206ENST00000419533 SPATA31A7Q8IWB4 1347 aa9.73□□□□□ -0.85
UBR4-206ENST00000419533 MCM4P33991 863 aa9.73□□□□□ -0.85
UBR4-206ENST00000419533 MEIS3Q99687 375 aa9.73□□□□□ -0.85
UBR4-206ENST00000419533 NSFL1CQ9UNZ2 370 aaKnown RBP9.73□□□□□ -0.85
UBR4-206ENST00000419533 PARD3Q8TEW0 1356 aa9.73□□□□□ -0.85
UBR4-206ENST00000419533 HDAC1Q13547 482 aaPredicted RBP9.73□□□□□ -0.85
UBR4-206ENST00000419533 CAMK4Q16566 473 aa9.73□□□□□ -0.85
UBR4-206ENST00000419533 CCDC144CPQ8IYA2 1237 aa9.73□□□□□ -0.85
UBR4-206ENST00000419533 SPDYE4A6NLX3 237 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 ERLIN1O75477 346 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 MCMDC2Q4G0Z9 681 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 C8orf58Q8NAV2 365 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 VEZTQ9HBM0 779 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 IQSEC2Q5JU85 1478 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 LOC102724428A0A0B4J2F2 783 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 TNNI2P48788 182 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 SIK1P57059 783 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 ARHGAP29Q52LW3 1261 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 SLC9C2Q5TAH2 1124 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 KLHL10Q6JEL2 608 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 IQSEC3Q9UPP2 1182 aaPredicted RBP9.72□□□□□ -0.85
UBR4-206ENST00000419533 BMP15O95972 392 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 LIG1P18858 919 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 PDE6BP35913 854 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 UBA7P41226 1012 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 CCDC183Q5T5S1 534 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 KANK3Q6NY19 840 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 TBC1D9Q6ZT07 1266 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 ANKRD44Q8N8A2 993 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 ZBTB43O43298 467 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 GJB2P29033 226 aa9.72□□□□□ -0.85
UBR4-206ENST00000419533 KIAA1210Q9ULL0 1709 aa9.71□□□□□ -0.85
UBR4-206ENST00000419533 AXDND1Q5T1B0 1012 aaPredicted RBP9.71□□□□□ -0.85
UBR4-206ENST00000419533 FILIP1Q7Z7B0 1213 aa9.71□□□□□ -0.85
UBR4-206ENST00000419533 SSH2Q76I76 1423 aa9.71□□□□□ -0.85
UBR4-206ENST00000419533 PAG1Q9NWQ8 432 aa9.71□□□□□ -0.85
UBR4-206ENST00000419533 PPLO60437 1756 aa9.71□□□□□ -0.86
UBR4-206ENST00000419533 HOXB7P09629 217 aa9.71□□□□□ -0.86
UBR4-206ENST00000419533 CALM1P0DP23 149 aa9.71□□□□□ -0.86
UBR4-206ENST00000419533 CALM2P0DP24 149 aa9.71□□□□□ -0.86
UBR4-206ENST00000419533 CALM3P0DP25 149 aa9.71□□□□□ -0.86
UBR4-206ENST00000419533 NUCB1Q02818 461 aa9.71□□□□□ -0.86
UBR4-206ENST00000419533 FAM114A1Q8IWE2 563 aa9.71□□□□□ -0.86
UBR4-206ENST00000419533 RBM27Q9P2N5 1060 aaKnown RBP9.71□□□□□ -0.86
UBR4-206ENST00000419533 KLF18A0A0U1RQI7 1052 aa9.71□□□□□ -0.86
UBR4-206ENST00000419533 TBCAO75347 108 aaKnown RBP9.71□□□□□ -0.86
UBR4-206ENST00000419533 LDHBP07195 334 aaKnown RBP9.71□□□□□ -0.86
UBR4-206ENST00000419533 FAM182BQ5T319 152 aa9.71□□□□□ -0.86
UBR4-206ENST00000419533 CCDC112Q8NEF3 446 aa9.71□□□□□ -0.86
UBR4-206ENST00000419533 SUPT20HQ8NEM7 779 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms