RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 UBE2HP62256 183 aa12.74□□□□□ -0.37
PTCH1-205ENST00000418258 LMBR1LQ6UX01 489 aa12.74□□□□□ -0.37
PTCH1-205ENST00000418258 Q6ZUG5 572 aa12.74□□□□□ -0.37
PTCH1-205ENST00000418258 NECAB1Q8N987 351 aa12.74□□□□□ -0.37
PTCH1-205ENST00000418258 GNPATO15228 680 aa12.74□□□□□ -0.37
PTCH1-205ENST00000418258 GNAT2P19087 354 aa12.74□□□□□ -0.37
PTCH1-205ENST00000418258 SNW1Q13573 536 aaKnown RBP12.74□□□□□ -0.37
PTCH1-205ENST00000418258 SPECC1LQ69YQ0 1117 aa12.74□□□□□ -0.37
PTCH1-205ENST00000418258 CEP112Q8N8E3 955 aa12.74□□□□□ -0.37
PTCH1-205ENST00000418258 NEMFO60524 1076 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 ZNF165P49910 485 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 C6orf163Q5TEZ5 329 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 SBNO2Q9Y2G9 1366 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 POTEB2H3BUK9 544 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 RASAL2Q9UJF2 1139 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 KDM5BQ9UGL1 1544 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 RFX1P22670 979 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 PTGS1P23219 599 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 TICAM2Q86XR7 235 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 TMOD4Q9NZQ9 345 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 SH3BP5O60239 455 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 HSF2BPO75031 334 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 KRT2P35908 639 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 APBB1IPQ7Z5R6 666 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-205ENST00000418258 MARCKSP29966 332 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-205ENST00000418258 IL15P40933 162 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-205ENST00000418258 AKAP4Q5JQC9 854 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 TTC22Q5TAA0 569 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 ZSCAN30Q86W11 494 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 RHPN1Q8TCX5 695 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 BRF1Q92994 677 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 GRIN2AQ12879 1464 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 RTL9Q8NET4 1388 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 PSMA7O14818 248 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 ADCY5O95622 1261 aa12.73□□□□□ -0.37
PTCH1-205ENST00000418258 MAK16Q9BXY0 300 aaKnown RBP12.73□□□□□ -0.37
PTCH1-205ENST00000418258 CALML3P27482 149 aa12.72□□□□□ -0.37
PTCH1-205ENST00000418258 MCM7P33993 719 aa12.72□□□□□ -0.37
PTCH1-205ENST00000418258 KCNG4Q8TDN1 519 aa12.72□□□□□ -0.37
PTCH1-205ENST00000418258 GPHNQ9NQX3 736 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-205ENST00000418258 IRS4O14654 1257 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-205ENST00000418258 PROCA1Q8NCQ7 364 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-205ENST00000418258 MSANTD4Q8NCY6 345 aa12.72□□□□□ -0.37
PTCH1-205ENST00000418258 ANKRD2Q9GZV1 360 aa12.72□□□□□ -0.37
PTCH1-205ENST00000418258 ZSWIM4Q9H7M6 989 aa12.72□□□□□ -0.37
PTCH1-205ENST00000418258 PLCB3Q01970 1234 aa12.72□□□□□ -0.37
PTCH1-205ENST00000418258 CYLC1P35663 651 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-205ENST00000418258 PRPHP41219 470 aa12.72□□□□□ -0.37
PTCH1-205ENST00000418258 HELBQ8NG08 1087 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-205ENST00000418258 SAP30BPQ9UHR5 308 aaKnown RBP12.72□□□□□ -0.37
PTCH1-205ENST00000418258 SNX16P57768 344 aa12.72□□□□□ -0.37
PTCH1-205ENST00000418258 CTTNBP2Q8WZ74 1663 aa12.72□□□□□ -0.37
PTCH1-205ENST00000418258 TXNDC16Q9P2K2 825 aa12.72□□□□□ -0.37
PTCH1-205ENST00000418258 TEX14Q8IWB6 1497 aa12.72□□□□□ -0.37
PTCH1-205ENST00000418258 GAS8O95995 478 aa12.71□□□□□ -0.37
PTCH1-205ENST00000418258 MXRA7P84157 204 aa12.71□□□□□ -0.37
PTCH1-205ENST00000418258 TNPO1Q92973 898 aaKnown RBP12.71□□□□□ -0.37
PTCH1-205ENST00000418258 PSMC4P43686 418 aa12.71□□□□□ -0.37
PTCH1-205ENST00000418258 CHST3Q7LGC8 479 aa12.71□□□□□ -0.37
PTCH1-205ENST00000418258 PKD2L1Q9P0L9 805 aa12.71□□□□□ -0.37
PTCH1-205ENST00000418258 HS2ST1Q7LGA3 356 aa12.71□□□□□ -0.38
PTCH1-205ENST00000418258 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.71□□□□□ -0.38
PTCH1-205ENST00000418258 ANKRD36BQ8N2N9 1353 aa12.71□□□□□ -0.38
PTCH1-205ENST00000418258 SLU7O95391 586 aaKnown RBP12.71□□□□□ -0.38
PTCH1-205ENST00000418258 GNG11P61952 73 aa12.7□□□□□ -0.38
PTCH1-205ENST00000418258 KRT79Q5XKE5 535 aa12.7□□□□□ -0.38
PTCH1-205ENST00000418258 FAM107BQ9H098 131 aa12.7□□□□□ -0.38
PTCH1-205ENST00000418258 CGNQ9P2M7 1197 aaKnown RBP12.7□□□□□ -0.38
PTCH1-205ENST00000418258 LRRC59Q96AG4 307 aaKnown RBP12.7□□□□□ -0.38
PTCH1-205ENST00000418258 RBM8AQ9Y5S9 174 aaKnown RBP12.7□□□□□ -0.38
PTCH1-205ENST00000418258 GNA11P29992 359 aa12.7□□□□□ -0.38
PTCH1-205ENST00000418258 KSR2Q6VAB6 950 aa12.7□□□□□ -0.38
PTCH1-205ENST00000418258 DHX58Q96C10 678 aa12.7□□□□□ -0.38
PTCH1-205ENST00000418258 UHRF1BP1LA0JNW5 1464 aa12.7□□□□□ -0.38
PTCH1-205ENST00000418258 STK32BQ9NY57 414 aa12.7□□□□□ -0.38
PTCH1-205ENST00000418258 CCDC14Q49A88 953 aa12.69□□□□□ -0.38
PTCH1-205ENST00000418258 BRDTQ58F21 947 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-205ENST00000418258 CNBD1Q8NA66 436 aa12.69□□□□□ -0.38
PTCH1-205ENST00000418258 TCEANC2Q96MN5 208 aa12.69□□□□□ -0.38
PTCH1-205ENST00000418258 PRXQ9BXM0 1461 aa12.69□□□□□ -0.38
PTCH1-205ENST00000418258 ATP2A1O14983 1001 aa12.69□□□□□ -0.38
PTCH1-205ENST00000418258 DTHD1Q6ZMT9 781 aa12.69□□□□□ -0.38
PTCH1-205ENST00000418258 MEIS3Q99687 375 aa12.69□□□□□ -0.38
PTCH1-205ENST00000418258 TRIM6Q9C030 488 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-205ENST00000418258 SH2D4AQ9H788 454 aa12.69□□□□□ -0.38
PTCH1-205ENST00000418258 C14orf93Q9H972 538 aaKnown RBP12.69□□□□□ -0.38
PTCH1-205ENST00000418258 BTG4Q9NY30 223 aa12.69□□□□□ -0.38
PTCH1-205ENST00000418258 PARP1P09874 1014 aaKnown RBP12.69□□□□□ -0.38
PTCH1-205ENST00000418258 HARSP12081 509 aaKnown RBP12.69□□□□□ -0.38
PTCH1-205ENST00000418258 SKAP1Q86WV1 359 aa12.69□□□□□ -0.38
PTCH1-205ENST00000418258 RAPGEF6Q8TEU7 1601 aa12.69□□□□□ -0.38
PTCH1-205ENST00000418258 KRT5P13647 590 aa12.69□□□□□ -0.38
PTCH1-205ENST00000418258 BMP2KLQ5H9B9 411 aa12.69□□□□□ -0.38
PTCH1-205ENST00000418258 GIMAP6Q6P9H5 292 aa12.69□□□□□ -0.38
PTCH1-205ENST00000418258 IL27Q8NEV9 243 aa12.69□□□□□ -0.38
PTCH1-205ENST00000418258 RBM27Q9P2N5 1060 aaKnown RBP12.69□□□□□ -0.38
PTCH1-205ENST00000418258 FRMD4BQ9Y2L6 1034 aa12.69□□□□□ -0.38
PTCH1-205ENST00000418258 NOP56O00567 594 aaKnown RBP12.68□□□□□ -0.38
PTCH1-205ENST00000418258 ZWINTO95229 277 aa12.68□□□□□ -0.38
PTCH1-205ENST00000418258 EIF6P56537 245 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms