RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 SEC62Q99442 399 aaKnown RBP20.54■□□□□ 0.88
CALD1-204ENST00000417172 LSG1Q9H089 658 aaKnown RBP20.54■□□□□ 0.88
CALD1-204ENST00000417172 PALD1Q9ULE6 856 aa20.54■□□□□ 0.88
CALD1-204ENST00000417172 CACNA1SQ13698 1873 aa20.54■□□□□ 0.88
CALD1-204ENST00000417172 PTH1RQ03431 593 aa20.53■□□□□ 0.88
CALD1-204ENST00000417172 ZNF589Q86UQ0 364 aaPredicted RBP20.53■□□□□ 0.88
CALD1-204ENST00000417172 EIF5BO60841 1220 aaKnown RBP20.53■□□□□ 0.88
CALD1-204ENST00000417172 ARID4AP29374 1257 aaPredicted RBP20.53■□□□□ 0.88
CALD1-204ENST00000417172 RUFY2Q8WXA3 655 aa20.53■□□□□ 0.88
CALD1-204ENST00000417172 HIP1O00291 1037 aa20.52■□□□□ 0.88
CALD1-204ENST00000417172 GYG1P46976 350 aa20.52■□□□□ 0.88
CALD1-204ENST00000417172 RASGRF1Q13972 1273 aa20.52■□□□□ 0.88
CALD1-204ENST00000417172 CCDC129Q6ZRS4 1044 aa20.52■□□□□ 0.88
CALD1-204ENST00000417172 IQSEC3Q9UPP2 1182 aaPredicted RBP20.52■□□□□ 0.88
CALD1-204ENST00000417172 PARP3Q9Y6F1 533 aa20.52■□□□□ 0.88
CALD1-204ENST00000417172 MED23Q9ULK4 1368 aa20.51■□□□□ 0.87
CALD1-204ENST00000417172 RAD50Q92878 1312 aa20.51■□□□□ 0.87
CALD1-204ENST00000417172 RFX7Q2KHR2 1363 aa20.51■□□□□ 0.87
CALD1-204ENST00000417172 CYP2E1P05181 493 aaPredicted RBP20.51■□□□□ 0.87
CALD1-204ENST00000417172 ZNF512BQ96KM6 892 aaPredicted RBP20.51■□□□□ 0.87
CALD1-204ENST00000417172 HMG20BQ9P0W2 317 aa20.51■□□□□ 0.87
CALD1-204ENST00000417172 GOLGB1Q14789 3259 aaKnown RBP20.5■□□□□ 0.87
CALD1-204ENST00000417172 MYH13Q9UKX3 1938 aa20.5■□□□□ 0.87
CALD1-204ENST00000417172 CD2BP2O95400 341 aaKnown RBP20.5■□□□□ 0.87
CALD1-204ENST00000417172 TBC1D2Q9BYX2 928 aa20.5■□□□□ 0.87
CALD1-204ENST00000417172 PIH1D3Q9NQM4 214 aaKnown RBP20.5■□□□□ 0.87
CALD1-204ENST00000417172 DOCK2Q92608 1830 aa20.49■□□□□ 0.87
CALD1-204ENST00000417172 UBE4AQ14139 1066 aa20.49■□□□□ 0.87
CALD1-204ENST00000417172 KLRG2A4D1S0 409 aaPredicted RBP20.49■□□□□ 0.87
CALD1-204ENST00000417172 UQCRFS1P1P0C7P4 283 aa20.49■□□□□ 0.87
CALD1-204ENST00000417172 KIAA1211Q6ZU35 1233 aa20.49■□□□□ 0.87
CALD1-204ENST00000417172 RBM17Q96I25 401 aaKnown RBP20.49■□□□□ 0.87
CALD1-204ENST00000417172 KCNJ4P48050 445 aa20.48■□□□□ 0.87
CALD1-204ENST00000417172 SPATA5Q8NB90 893 aa20.48■□□□□ 0.87
CALD1-204ENST00000417172 BRIP1Q9BX63 1249 aa20.48■□□□□ 0.87
CALD1-204ENST00000417172 COL1A1P02452 1464 aaPredicted RBP20.48■□□□□ 0.87
CALD1-204ENST00000417172 CCDC171Q6TFL3 1326 aa20.48■□□□□ 0.87
CALD1-204ENST00000417172 TXNRD3Q86VQ6 643 aa20.47■□□□□ 0.87
CALD1-204ENST00000417172 GPR101Q96P66 508 aaPredicted RBP20.47■□□□□ 0.87
CALD1-204ENST00000417172 RNF113AO15541 343 aaKnown RBP20.47■□□□□ 0.87
CALD1-204ENST00000417172 HOXA10P31260 410 aaPredicted RBP20.47■□□□□ 0.87
CALD1-204ENST00000417172 FAM84BQ96KN1 310 aaPredicted RBP20.47■□□□□ 0.87
CALD1-204ENST00000417172 ANKRD2Q9GZV1 360 aa20.47■□□□□ 0.87
CALD1-204ENST00000417172 ANKIB1Q9P2G1 1089 aa20.47■□□□□ 0.87
CALD1-204ENST00000417172 ZNF804BA4D1E1 1349 aa20.47■□□□□ 0.87
CALD1-204ENST00000417172 HSPA4P34932 840 aa20.46■□□□□ 0.87
CALD1-204ENST00000417172 LRRC37AA6NMS7 1700 aa20.46■□□□□ 0.87
CALD1-204ENST00000417172 M0R2C6 588 aa20.45■□□□□ 0.86
CALD1-204ENST00000417172 SRGNP10124 158 aa20.45■□□□□ 0.86
CALD1-204ENST00000417172 GPSM2P81274 684 aa20.45■□□□□ 0.86
CALD1-204ENST00000417172 ZMYM1Q5SVZ6 1142 aa20.45■□□□□ 0.86
CALD1-204ENST00000417172 MAST3O60307 1309 aa20.45■□□□□ 0.86
CALD1-204ENST00000417172 IDH1O75874 414 aaKnown RBP20.45■□□□□ 0.86
CALD1-204ENST00000417172 MCMDC2Q4G0Z9 681 aa20.45■□□□□ 0.86
CALD1-204ENST00000417172 RASEFQ8IZ41 740 aa20.45■□□□□ 0.86
CALD1-204ENST00000417172 OSBP2Q969R2 916 aa20.45■□□□□ 0.86
CALD1-204ENST00000417172 MCCP23508 829 aa20.44■□□□□ 0.86
CALD1-204ENST00000417172 OLFM4Q6UX06 510 aa20.44■□□□□ 0.86
CALD1-204ENST00000417172 CRAMP1Q96RY5 1269 aa20.44■□□□□ 0.86
CALD1-204ENST00000417172 DAXXQ9UER7 740 aaPredicted RBP20.44■□□□□ 0.86
CALD1-204ENST00000417172 WWC3Q9ULE0 1092 aa20.44■□□□□ 0.86
CALD1-204ENST00000417172 RBM8AQ9Y5S9 174 aaKnown RBP20.44■□□□□ 0.86
CALD1-204ENST00000417172 IRS2Q9Y4H2 1338 aa20.44■□□□□ 0.86
CALD1-204ENST00000417172 LTBP1Q14766 1721 aa20.44■□□□□ 0.86
CALD1-204ENST00000417172 BECN1Q14457 450 aa20.43■□□□□ 0.86
CALD1-204ENST00000417172 VPS53Q5VIR6 699 aa20.43■□□□□ 0.86
CALD1-204ENST00000417172 PRPF40BQ6NWY9 871 aaKnown RBP20.43■□□□□ 0.86
CALD1-204ENST00000417172 XDHP47989 1333 aa20.43■□□□□ 0.86
CALD1-204ENST00000417172 RABEP1Q15276 862 aa20.43■□□□□ 0.86
CALD1-204ENST00000417172 WASHC4Q2M389 1173 aa20.43■□□□□ 0.86
CALD1-204ENST00000417172 CAVIN4Q5BKX8 364 aa20.43■□□□□ 0.86
CALD1-204ENST00000417172 VPS37DQ86XT2 251 aa20.43■□□□□ 0.86
CALD1-204ENST00000417172 MAP4K1Q92918 833 aa20.43■□□□□ 0.86
CALD1-204ENST00000417172 NSFL1CQ9UNZ2 370 aaKnown RBP20.43■□□□□ 0.86
CALD1-204ENST00000417172 PDE6BP35913 854 aa20.42■□□□□ 0.86
CALD1-204ENST00000417172 FBXO33Q7Z6M2 555 aa20.42■□□□□ 0.86
CALD1-204ENST00000417172 HELLSQ9NRZ9 838 aa20.42■□□□□ 0.86
CALD1-204ENST00000417172 SNX14Q9Y5W7 946 aa20.42■□□□□ 0.86
CALD1-204ENST00000417172 PPEF1O14829 653 aaPredicted RBP20.41■□□□□ 0.86
CALD1-204ENST00000417172 EPB41L2O43491 1005 aaKnown RBP20.41■□□□□ 0.86
CALD1-204ENST00000417172 TTF1Q15361 905 aaPredicted RBP20.41■□□□□ 0.86
CALD1-204ENST00000417172 SLC9C2Q5TAH2 1124 aa20.41■□□□□ 0.86
CALD1-204ENST00000417172 SPRYD3Q8NCJ5 442 aa20.41■□□□□ 0.86
CALD1-204ENST00000417172 PUS7LQ9H0K6 701 aaKnown RBP20.41■□□□□ 0.86
CALD1-204ENST00000417172 TAF6LQ9Y6J9 622 aa20.41■□□□□ 0.86
CALD1-204ENST00000417172 BBOX1O75936 387 aa20.41■□□□□ 0.86
CALD1-204ENST00000417172 NPR1P16066 1061 aa20.41■□□□□ 0.86
CALD1-204ENST00000417172 ADD2P35612 726 aa20.41■□□□□ 0.86
CALD1-204ENST00000417172 NECTIN1Q15223 517 aa20.41■□□□□ 0.86
CALD1-204ENST00000417172 CHRNA5P30532 468 aa20.4■□□□□ 0.86
CALD1-204ENST00000417172 HSCBQ8IWL3 235 aa20.4■□□□□ 0.86
CALD1-204ENST00000417172 UPF3BQ9BZI7 483 aaKnown RBP20.4■□□□□ 0.86
CALD1-204ENST00000417172 JAG2Q9Y219 1238 aa20.4■□□□□ 0.86
CALD1-204ENST00000417172 SLX4Q8IY92 1834 aa20.4■□□□□ 0.86
CALD1-204ENST00000417172 ZNF532Q9HCE3 1301 aa20.4■□□□□ 0.86
CALD1-204ENST00000417172 UFL1O94874 794 aa20.39■□□□□ 0.86
CALD1-204ENST00000417172 PDE6AP16499 860 aa20.39■□□□□ 0.86
CALD1-204ENST00000417172 HIBADHP31937 336 aaKnown RBP20.39■□□□□ 0.86
CALD1-204ENST00000417172 ANAPC15P60006 121 aa20.39■□□□□ 0.86
CALD1-204ENST00000417172 C2CD5Q86YS7 1000 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms