RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 GOLPH3LQ9H4A5 285 aa17.09■□□□□ 0.33
NCKIPSD-204ENST00000416649 TAF6LQ9Y6J9 622 aa17.09■□□□□ 0.33
NCKIPSD-204ENST00000416649 LTN1O94822 1766 aa17.09■□□□□ 0.33
NCKIPSD-204ENST00000416649 PRAMEF22A3QJZ6 481 aa17.09■□□□□ 0.33
NCKIPSD-204ENST00000416649 PTPN21Q16825 1174 aa17.09■□□□□ 0.33
NCKIPSD-204ENST00000416649 C1orf141Q5JVX7 400 aa17.09■□□□□ 0.33
NCKIPSD-204ENST00000416649 CC2D1AQ6P1N0 951 aaPredicted RBP17.09■□□□□ 0.33
NCKIPSD-204ENST00000416649 FBXO18Q8NFZ0 1043 aa17.09■□□□□ 0.33
NCKIPSD-204ENST00000416649 FAM227BQ96M60 508 aa17.09■□□□□ 0.33
NCKIPSD-204ENST00000416649 ZSWIM4Q9H7M6 989 aa17.09■□□□□ 0.33
NCKIPSD-204ENST00000416649 ARFGAP3Q9NP61 516 aa17.09■□□□□ 0.33
NCKIPSD-204ENST00000416649 TADA3O75528 432 aa17.08■□□□□ 0.33
NCKIPSD-204ENST00000416649 LEKR1Q6ZMV7 388 aa17.08■□□□□ 0.33
NCKIPSD-204ENST00000416649 TEX2Q8IWB9 1127 aa17.08■□□□□ 0.33
NCKIPSD-204ENST00000416649 GOLGA5Q8TBA6 731 aa17.08■□□□□ 0.33
NCKIPSD-204ENST00000416649 NAT10Q9H0A0 1025 aaKnown RBP17.08■□□□□ 0.33
NCKIPSD-204ENST00000416649 CFAP45Q9UL16 551 aa17.08■□□□□ 0.33
NCKIPSD-204ENST00000416649 MARF1Q9Y4F3 1742 aaKnown RBP17.08■□□□□ 0.33
NCKIPSD-204ENST00000416649 ME1P48163 572 aa17.08■□□□□ 0.32
NCKIPSD-204ENST00000416649 NECTIN1Q15223 517 aa17.08■□□□□ 0.32
NCKIPSD-204ENST00000416649 SKIDA1Q1XH10 827 aa17.08■□□□□ 0.32
NCKIPSD-204ENST00000416649 HDGFL1Q5TGJ6 251 aa17.08■□□□□ 0.32
NCKIPSD-204ENST00000416649 CCDC150Q8NCX0 1101 aa17.08■□□□□ 0.32
NCKIPSD-204ENST00000416649 RGPD1P0DJD0 1748 aa17.08■□□□□ 0.32
NCKIPSD-204ENST00000416649 PSDA5PKW4 1024 aaPredicted RBP17.07■□□□□ 0.32
NCKIPSD-204ENST00000416649 GLRX3O76003 335 aaKnown RBP17.07■□□□□ 0.32
NCKIPSD-204ENST00000416649 PSMA5P28066 241 aa17.07■□□□□ 0.32
NCKIPSD-204ENST00000416649 GOLGA8FQ08AF8 430 aa17.07■□□□□ 0.32
NCKIPSD-204ENST00000416649 GOLGA8DPQ0D2H9 430 aa17.07■□□□□ 0.32
NCKIPSD-204ENST00000416649 SLC39A6Q13433 755 aa17.07■□□□□ 0.32
NCKIPSD-204ENST00000416649 REXO1L1PQ8IX06 675 aa17.07■□□□□ 0.32
NCKIPSD-204ENST00000416649 RGPD2P0DJD1 1756 aa17.07■□□□□ 0.32
NCKIPSD-204ENST00000416649 ISM2Q6H9L7 571 aa17.07■□□□□ 0.32
NCKIPSD-204ENST00000416649 FSIP1Q8NA03 581 aa17.07■□□□□ 0.32
NCKIPSD-204ENST00000416649 SSH3Q8TE77 659 aa17.07■□□□□ 0.32
NCKIPSD-204ENST00000416649 SIL1Q9H173 461 aa17.07■□□□□ 0.32
NCKIPSD-204ENST00000416649 BTBD11A6QL63 1104 aa17.07■□□□□ 0.32
NCKIPSD-204ENST00000416649 CTAGE5O15320 804 aa17.07■□□□□ 0.32
NCKIPSD-204ENST00000416649 PLEKHO1Q53GL0 409 aaPredicted RBP17.07■□□□□ 0.32
NCKIPSD-204ENST00000416649 UTP14AQ9BVJ6 771 aaKnown RBP17.07■□□□□ 0.32
NCKIPSD-204ENST00000416649 OSBPL5Q9H0X9 879 aaPredicted RBP17.07■□□□□ 0.32
NCKIPSD-204ENST00000416649 VPS18Q9P253 973 aa17.07■□□□□ 0.32
NCKIPSD-204ENST00000416649 SLC27A2O14975 620 aa17.06■□□□□ 0.32
NCKIPSD-204ENST00000416649 MCM6Q14566 821 aa17.06■□□□□ 0.32
NCKIPSD-204ENST00000416649 NWD1Q149M9 1564 aa17.06■□□□□ 0.32
NCKIPSD-204ENST00000416649 EFCAB8A8MWE9 144 aa17.06■□□□□ 0.32
NCKIPSD-204ENST00000416649 LMOD1P29536 600 aaPredicted RBP17.06■□□□□ 0.32
NCKIPSD-204ENST00000416649 GUCY1B3Q02153 619 aa17.06■□□□□ 0.32
NCKIPSD-204ENST00000416649 RESTQ13127 1097 aa17.06■□□□□ 0.32
NCKIPSD-204ENST00000416649 CCDC158Q5M9N0 1113 aa17.06■□□□□ 0.32
NCKIPSD-204ENST00000416649 LRRFIP1Q32MZ4 808 aaKnown RBP17.05■□□□□ 0.32
NCKIPSD-204ENST00000416649 TTC31Q49AM3 519 aaPredicted RBP17.05■□□□□ 0.32
NCKIPSD-204ENST00000416649 NOM1Q5C9Z4 860 aaKnown RBP17.05■□□□□ 0.32
NCKIPSD-204ENST00000416649 CCDC30Q5VVM6 783 aa17.05■□□□□ 0.32
NCKIPSD-204ENST00000416649 BRINP3Q76B58 766 aa17.05■□□□□ 0.32
NCKIPSD-204ENST00000416649 PA2G4Q9UQ80 394 aaKnown RBP17.05■□□□□ 0.32
NCKIPSD-204ENST00000416649 MST1RQ04912 1400 aa17.05■□□□□ 0.32
NCKIPSD-204ENST00000416649 TUBGCP6Q96RT7 1819 aa17.05■□□□□ 0.32
NCKIPSD-204ENST00000416649 PIP4K2AP48426 406 aaPredicted RBP17.05■□□□□ 0.32
NCKIPSD-204ENST00000416649 SART3Q15020 963 aaKnown RBP17.05■□□□□ 0.32
NCKIPSD-204ENST00000416649 DPCR1Q3MIW9 517 aa17.05■□□□□ 0.32
NCKIPSD-204ENST00000416649 FOXR1Q6PIV2 292 aa17.05■□□□□ 0.32
NCKIPSD-204ENST00000416649 RAPGEF4Q8WZA2 1011 aa17.05■□□□□ 0.32
NCKIPSD-204ENST00000416649 IMPACTQ9P2X3 320 aa17.05■□□□□ 0.32
NCKIPSD-204ENST00000416649 JRKLQ9Y4A0 524 aa17.05■□□□□ 0.32
NCKIPSD-204ENST00000416649 NDUFB9Q9Y6M9 179 aa17.05■□□□□ 0.32
NCKIPSD-204ENST00000416649 NFAT5O94916 1531 aa17.04■□□□□ 0.32
NCKIPSD-204ENST00000416649 H3BQF6 201 aa17.04■□□□□ 0.32
NCKIPSD-204ENST00000416649 NBPF7P0C2Y1 421 aaPredicted RBP17.04■□□□□ 0.32
NCKIPSD-204ENST00000416649 ACTN2P35609 894 aa17.04■□□□□ 0.32
NCKIPSD-204ENST00000416649 ANKRD1Q15327 319 aa17.04■□□□□ 0.32
NCKIPSD-204ENST00000416649 LRRC2Q9BYS8 371 aa17.04■□□□□ 0.32
NCKIPSD-204ENST00000416649 STRN4Q9NRL3 753 aa17.04■□□□□ 0.32
NCKIPSD-204ENST00000416649 STRCP1A6NGW2 1772 aa17.04■□□□□ 0.32
NCKIPSD-204ENST00000416649 FANCGO15287 622 aa17.04■□□□□ 0.32
NCKIPSD-204ENST00000416649 NMIQ13287 307 aaPredicted RBP17.04■□□□□ 0.32
NCKIPSD-204ENST00000416649 TOB2Q14106 344 aaPredicted RBP17.04■□□□□ 0.32
NCKIPSD-204ENST00000416649 CTR9Q6PD62 1173 aa17.04■□□□□ 0.32
NCKIPSD-204ENST00000416649 CLASRPQ8N2M8 674 aaKnown RBP17.04■□□□□ 0.32
NCKIPSD-204ENST00000416649 PARD6BQ9BYG5 372 aa17.04■□□□□ 0.32
NCKIPSD-204ENST00000416649 ATG3Q9NT62 314 aa17.04■□□□□ 0.32
NCKIPSD-204ENST00000416649 A0A1B0GUL7 405 aa17.03■□□□□ 0.32
NCKIPSD-204ENST00000416649 TPM1P09493 284 aa17.03■□□□□ 0.32
NCKIPSD-204ENST00000416649 KCND1Q9NSA2 647 aa17.03■□□□□ 0.32
NCKIPSD-204ENST00000416649 ADCY9O60503 1353 aa17.03■□□□□ 0.32
NCKIPSD-204ENST00000416649 RPS6KB1P23443 525 aa17.03■□□□□ 0.32
NCKIPSD-204ENST00000416649 GNG11P61952 73 aa17.03■□□□□ 0.32
NCKIPSD-204ENST00000416649 E2F4Q16254 413 aa17.03■□□□□ 0.32
NCKIPSD-204ENST00000416649 CHPF2Q9P2E5 772 aa17.03■□□□□ 0.32
NCKIPSD-204ENST00000416649 A0A1B0GVL5 298 aa17.03■□□□□ 0.32
NCKIPSD-204ENST00000416649 PACS2Q86VP3 889 aa17.03■□□□□ 0.32
NCKIPSD-204ENST00000416649 EXOC4Q96A65 974 aa17.03■□□□□ 0.32
NCKIPSD-204ENST00000416649 USP28Q96RU2 1077 aa17.03■□□□□ 0.32
NCKIPSD-204ENST00000416649 SRRTQ9BXP5 876 aaKnown RBP17.03■□□□□ 0.32
NCKIPSD-204ENST00000416649 GEMIN8Q9NWZ8 242 aaKnown RBP17.03■□□□□ 0.32
NCKIPSD-204ENST00000416649 SLAIN2Q9P270 581 aa17.03■□□□□ 0.32
NCKIPSD-204ENST00000416649 PARP3Q9Y6F1 533 aa17.03■□□□□ 0.32
NCKIPSD-204ENST00000416649 PHLPP2Q6ZVD8 1323 aa17.03■□□□□ 0.32
NCKIPSD-204ENST00000416649 PXDNQ92626 1479 aa17.02■□□□□ 0.32
NCKIPSD-204ENST00000416649 PHACTR2O75167 634 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms